| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is fhuA [H]
Identifier: 83720594
GI number: 83720594
Start: 1591767
End: 1594235
Strand: Direct
Name: fhuA [H]
Synonym: BTH_I1412
Alternate gene names: 83720594
Gene position: 1591767-1594235 (Clockwise)
Preceding gene: 83721160
Following gene: 83721274
Centisome position: 41.79
GC content: 72.66
Gene sequence:
>2469_bases ATGCAAGCGGGACCCGGGTCCTCGCATGCCGATGATCGGCGTTCGGCCGCGCGCGCGATGCCATCGAGGTTGCGGGAGTC GACGAGCAGTGAACAGAGCGAAGCGGGCGGGAAACGTTCGGGGCCGCGTGGCGCCGACGACAGTGGAGCGTGCGGCGTGC GCTCGGGCGGGGGCGGTGGACGAGGCAATCCGTCGATGAGCCGGGCGCAGCATGCACCGTCGCGCCGTCGCGCGTTCGAG CGCAGCTTCGCGGCGGCGGCCGCCCGCGCCGCTCACGGCGCGCCTGCCGCGCATGGCCCGCACGCGTGCCTCGCCGCCGC GTCGCGTCGCTCGACGGCCGTCGAGCGCTGCGTCACCGCGCTCGCGTGCGCGGTGACGGCGTCCGGCGCGCTCGCCGCCG ACGCGGACCCGGCCGAATCCGCGCGCGACCCGCATCGCGAACTGCCGACCGTGCGCGTGACGAGCGACGCGGCGCACGCA TCGCCGCTGTCCACGCCGCTCACGGCCGGCTCGCGCCTGAAGCTCGCGAGCCTCGACATGCCCGCGAGCGTCGAGGCGAT CACGTCCGGGCAGATGGCCGCGCGCGGCGATCGCACGATCGTCGACGCCGTCACGCGCGCGACGGGCTTCAGCACGGCCG CGGCGCCCGGCAACGGCGGCACGGCGCTCAGCGTGCGCGGCTTCGCCGGCCAGGAATCGGTGACGACGCTCGTCGACGGC GTGCGTCTCTACCCCGGCGCGGGCACCGTCACGTTCCCGTTCTCGACGTGGTCCGCCGAGCGCATCGAGGTGCTGCGCGG GCCGGCGTCGGTGCTGCACGGCGAAGGGGCGATCGGCGGCGTCGTCGATGTCGTGACCCGGCGCCCGCGCCGCGAACGAT CGACGACGCTGCAGGCGAGCATCGGCACGCAAGGCGAAAAGCGCGTGGCGCTCGACACGACGGGCGCGCTCGGCCCGCGT CTTTCTTATCGTTTCCATCTGAGCGACGAGCGCACGCGCGGCTTCGTCGAGCGCGGCGACGCGCACGCGACGGCCGTCGG CGGCGCGCTGAAGCTCGATGTCGATTCGCGTTTGTCGATTACGCTCGATTACGACTACGGCCGCCAGAAGCCGGCGACCT ATTTCGGCGTGCCGGCGGCGAACGGCGTGCTCGACCGCGCGCTGCGCGAGCGCAACTACAACGTCGGCGACGCGACGATC GCTTACCACGATACCTGGACGCGGCTTGCCGCGACCTATCGCGCGGGCAACGGCGTGACGCTCGACGCCCAGCTCTACTA TCTCGCGACGCGCCGCCATTGGCGCAACGCGGAATCGTACGCGCTCGACGCGGCGGCGCGCACCGTCGCGCGCAGCGACT ATCTCGAGATCTTCCATCGCGAGCGGCAGTTCGGCGAGCGCTTCACCGCACGCATCGATTCGCGCGTGTTCGGCCGCGCG AACCGCCTCGTGGTCGGCGCCGAGTTCAACCAGATCGCGTTCGACGGCGCGAACAACGCGCCGTATCGCGGCGAATCGAC CGTCGCCGCCGCCGGCTTCGATCCCGGCGCGTTCGCGAGCCCCGATCCGACGCTGCCGCGCTTTCGCACGCGCACGCATC AGGCGGCGGCGTTCATCGAGAACCGGCTCGAGGTCCTGCCGCGGCTCGCGTGGGTGAGCGGGCTGCGTTACGACCATCTG TCGTTTCACCGCGACGATCTGGTCGCGGGCGGCGCGTTCGACAAGACGTTCGCGCACACCGGCTGGCGCAGCGGGCTCGT CTACGAGATCGCGCCGGGCCTGACCGCGTACGCGCAATACACGACGGGCGCGGAGGGCGTGGGCTCGCTCGTCACGCTGC CGGCGTCGCAGGCGAACTACACGCTCGCGACCGGGCGCCAATGGGAAGCGGGCGTCAAGCACGAGATCGACGACGCTCGC GCGTACTGGACGCTCGCCGTCTACGACATCGTCAAGCGCGGCCTCGTCAGCGTCGACCCGCTGAATCCGGCGCGCGCGCA GCAGATCGGCCGCCAGTCGTCGCGCGGCGTCGAACTCGCGGGCGGCGTGCGTCTGCCGGGCGGCGTGACGATCGACGCAA ACGCGGCGTTGCTGCGCGCGCGTTACGACGCGTTCGGCCAGCGCGTCGGCGACACGGTCGTGCAGCGCGCGGGCAACGTG CCGCACGACATCGCGCGGCAGACCGCGAACCTGTGGATCGGCTGGGCGTTCGCGCCAGGCTGGCGCGCGAATGCGGGCTT GCGTTACGTCGGCCGTCGCTACGGCGACGACGCGAACCGCGTGCCGGTGCCGTCGTACACGGTGTTCGACGCGTCGCTCG CGTGGCAGGCGACGCGCGACGTCGGCCTCGCGCTCTACGCGCGCAACCTTGCGAACCGTACGTACGCGGCGTCGACGTCG AACGGCGGCGCGCAATGGCTGCTCGGCCCGTCGCGTTCGGCCGAGCTCGTCGCGACGCTGCGCTTCTAG
Upstream 100 bases:
>100_bases TTATATCATCGTCCCCGCTGTGTAGGCGAACCGTAAGCCGTCGCGATTCGATCGTGACGTGCGCGTGGCGCCTGCGTCCA GCCGTGCGTGCGCGACGCCG
Downstream 100 bases:
>100_bases CGCGGCGGCGCATCCCGACGCTCGACGACGCACGCATGCCCATGTCCGCGACCCTCGACATCGAACGCCTGAGCTGGTCG CCCGCCGGCGCGGGCGCGTT
Product: TonB-dependent siderophore receptor family protein
Products: NA
Alternate protein names: Ferric hydroxamate receptor; Ferric hydroxamate uptake [H]
Number of amino acids: Translated: 822; Mature: 822
Protein sequence:
>822_residues MQAGPGSSHADDRRSAARAMPSRLRESTSSEQSEAGGKRSGPRGADDSGACGVRSGGGGGRGNPSMSRAQHAPSRRRAFE RSFAAAAARAAHGAPAAHGPHACLAAASRRSTAVERCVTALACAVTASGALAADADPAESARDPHRELPTVRVTSDAAHA SPLSTPLTAGSRLKLASLDMPASVEAITSGQMAARGDRTIVDAVTRATGFSTAAAPGNGGTALSVRGFAGQESVTTLVDG VRLYPGAGTVTFPFSTWSAERIEVLRGPASVLHGEGAIGGVVDVVTRRPRRERSTTLQASIGTQGEKRVALDTTGALGPR LSYRFHLSDERTRGFVERGDAHATAVGGALKLDVDSRLSITLDYDYGRQKPATYFGVPAANGVLDRALRERNYNVGDATI AYHDTWTRLAATYRAGNGVTLDAQLYYLATRRHWRNAESYALDAAARTVARSDYLEIFHRERQFGERFTARIDSRVFGRA NRLVVGAEFNQIAFDGANNAPYRGESTVAAAGFDPGAFASPDPTLPRFRTRTHQAAAFIENRLEVLPRLAWVSGLRYDHL SFHRDDLVAGGAFDKTFAHTGWRSGLVYEIAPGLTAYAQYTTGAEGVGSLVTLPASQANYTLATGRQWEAGVKHEIDDAR AYWTLAVYDIVKRGLVSVDPLNPARAQQIGRQSSRGVELAGGVRLPGGVTIDANAALLRARYDAFGQRVGDTVVQRAGNV PHDIARQTANLWIGWAFAPGWRANAGLRYVGRRYGDDANRVPVPSYTVFDASLAWQATRDVGLALYARNLANRTYAASTS NGGAQWLLGPSRSAELVATLRF
Sequences:
>Translated_822_residues MQAGPGSSHADDRRSAARAMPSRLRESTSSEQSEAGGKRSGPRGADDSGACGVRSGGGGGRGNPSMSRAQHAPSRRRAFE RSFAAAAARAAHGAPAAHGPHACLAAASRRSTAVERCVTALACAVTASGALAADADPAESARDPHRELPTVRVTSDAAHA SPLSTPLTAGSRLKLASLDMPASVEAITSGQMAARGDRTIVDAVTRATGFSTAAAPGNGGTALSVRGFAGQESVTTLVDG VRLYPGAGTVTFPFSTWSAERIEVLRGPASVLHGEGAIGGVVDVVTRRPRRERSTTLQASIGTQGEKRVALDTTGALGPR LSYRFHLSDERTRGFVERGDAHATAVGGALKLDVDSRLSITLDYDYGRQKPATYFGVPAANGVLDRALRERNYNVGDATI AYHDTWTRLAATYRAGNGVTLDAQLYYLATRRHWRNAESYALDAAARTVARSDYLEIFHRERQFGERFTARIDSRVFGRA NRLVVGAEFNQIAFDGANNAPYRGESTVAAAGFDPGAFASPDPTLPRFRTRTHQAAAFIENRLEVLPRLAWVSGLRYDHL SFHRDDLVAGGAFDKTFAHTGWRSGLVYEIAPGLTAYAQYTTGAEGVGSLVTLPASQANYTLATGRQWEAGVKHEIDDAR AYWTLAVYDIVKRGLVSVDPLNPARAQQIGRQSSRGVELAGGVRLPGGVTIDANAALLRARYDAFGQRVGDTVVQRAGNV PHDIARQTANLWIGWAFAPGWRANAGLRYVGRRYGDDANRVPVPSYTVFDASLAWQATRDVGLALYARNLANRTYAASTS NGGAQWLLGPSRSAELVATLRF >Mature_822_residues MQAGPGSSHADDRRSAARAMPSRLRESTSSEQSEAGGKRSGPRGADDSGACGVRSGGGGGRGNPSMSRAQHAPSRRRAFE RSFAAAAARAAHGAPAAHGPHACLAAASRRSTAVERCVTALACAVTASGALAADADPAESARDPHRELPTVRVTSDAAHA SPLSTPLTAGSRLKLASLDMPASVEAITSGQMAARGDRTIVDAVTRATGFSTAAAPGNGGTALSVRGFAGQESVTTLVDG VRLYPGAGTVTFPFSTWSAERIEVLRGPASVLHGEGAIGGVVDVVTRRPRRERSTTLQASIGTQGEKRVALDTTGALGPR LSYRFHLSDERTRGFVERGDAHATAVGGALKLDVDSRLSITLDYDYGRQKPATYFGVPAANGVLDRALRERNYNVGDATI AYHDTWTRLAATYRAGNGVTLDAQLYYLATRRHWRNAESYALDAAARTVARSDYLEIFHRERQFGERFTARIDSRVFGRA NRLVVGAEFNQIAFDGANNAPYRGESTVAAAGFDPGAFASPDPTLPRFRTRTHQAAAFIENRLEVLPRLAWVSGLRYDHL SFHRDDLVAGGAFDKTFAHTGWRSGLVYEIAPGLTAYAQYTTGAEGVGSLVTLPASQANYTLATGRQWEAGVKHEIDDAR AYWTLAVYDIVKRGLVSVDPLNPARAQQIGRQSSRGVELAGGVRLPGGVTIDANAALLRARYDAFGQRVGDTVVQRAGNV PHDIARQTANLWIGWAFAPGWRANAGLRYVGRRYGDDANRVPVPSYTVFDASLAWQATRDVGLALYARNLANRTYAASTS NGGAQWLLGPSRSAELVATLRF
Specific function: This receptor binds the ferrichrome-iron ligand. It interacts with the tonB protein, which is responsible for energy coupling of the ferrichrome-promoted iron transport system. Acts as a receptor for bacteriophage T5 as well as T1, phi80 and colicin M. Bi
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1786344, Length=712, Percent_Identity=25.2808988764045, Blast_Score=139, Evalue=5e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 87473; Mature: 87473
Theoretical pI: Translated: 10.18; Mature: 10.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQAGPGSSHADDRRSAARAMPSRLRESTSSEQSEAGGKRSGPRGADDSGACGVRSGGGGG CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC RGNPSMSRAQHAPSRRRAFERSFAAAAARAAHGAPAAHGPHACLAAASRRSTAVERCVTA CCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LACAVTASGALAADADPAESARDPHRELPTVRVTSDAAHASPLSTPLTAGSRLKLASLDM HHHHHHCCCCCCCCCCCHHHCCCHHHHCCEEEEECCCCCCCCCCCCCCCCCEEEEEECCC PASVEAITSGQMAARGDRTIVDAVTRATGFSTAAAPGNGGTALSVRGFAGQESVTTLVDG CCCHHHHCCCCHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHCC VRLYPGAGTVTFPFSTWSAERIEVLRGPASVLHGEGAIGGVVDVVTRRPRRERSTTLQAS EEEECCCCEEEEECCCCCHHHHHHHHCCHHHHCCCCCHHHHHHHHHCCCCHHHCCEEEEE IGTQGEKRVALDTTGALGPRLSYRFHLSDERTRGFVERGDAHATAVGGALKLDVDSRLSI CCCCCCCEEEEECCCCCCCCEEEEEECCCHHHHHHHHCCCCCEEEECCEEEEECCCCEEE TLDYDYGRQKPATYFGVPAANGVLDRALRERNYNVGDATIAYHDTWTRLAATYRAGNGVT EEECCCCCCCCCEEECCCCCCHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHEECCCCEE LDAQLYYLATRRHWRNAESYALDAAARTVARSDYLEIFHRERQFGERFTARIDSRVFGRA EEEEEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC NRLVVGAEFNQIAFDGANNAPYRGESTVAAAGFDPGAFASPDPTLPRFRTRTHQAAAFIE CEEEEECCCCEEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHH NRLEVLPRLAWVSGLRYDHLSFHRDDLVAGGAFDKTFAHTGWRSGLVYEIAPGLTAYAQY HHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCHHHHHHCCCCCCEEEEECCCCEEHHHH TTGAEGVGSLVTLPASQANYTLATGRQWEAGVKHEIDDARAYWTLAVYDIVKRGLVSVDP CCCCCCCCCEEEECCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC LNPARAQQIGRQSSRGVELAGGVRLPGGVTIDANAALLRARYDAFGQRVGDTVVQRAGNV CCHHHHHHHCCCCCCCEEEECCEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCC PHDIARQTANLWIGWAFAPGWRANAGLRYVGRRYGDDANRVPVPSYTVFDASLAWQATRD CHHHHHHHCCEEEEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCEEEEECHHHHHHHHH VGLALYARNLANRTYAASTSNGGAQWLLGPSRSAELVATLRF HHHHHHHHHHCCCEEEECCCCCCEEEEECCCCCCEEEEEECC >Mature Secondary Structure MQAGPGSSHADDRRSAARAMPSRLRESTSSEQSEAGGKRSGPRGADDSGACGVRSGGGGG CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC RGNPSMSRAQHAPSRRRAFERSFAAAAARAAHGAPAAHGPHACLAAASRRSTAVERCVTA CCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LACAVTASGALAADADPAESARDPHRELPTVRVTSDAAHASPLSTPLTAGSRLKLASLDM HHHHHHCCCCCCCCCCCHHHCCCHHHHCCEEEEECCCCCCCCCCCCCCCCCEEEEEECCC PASVEAITSGQMAARGDRTIVDAVTRATGFSTAAAPGNGGTALSVRGFAGQESVTTLVDG CCCHHHHCCCCHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHCC VRLYPGAGTVTFPFSTWSAERIEVLRGPASVLHGEGAIGGVVDVVTRRPRRERSTTLQAS EEEECCCCEEEEECCCCCHHHHHHHHCCHHHHCCCCCHHHHHHHHHCCCCHHHCCEEEEE IGTQGEKRVALDTTGALGPRLSYRFHLSDERTRGFVERGDAHATAVGGALKLDVDSRLSI CCCCCCCEEEEECCCCCCCCEEEEEECCCHHHHHHHHCCCCCEEEECCEEEEECCCCEEE TLDYDYGRQKPATYFGVPAANGVLDRALRERNYNVGDATIAYHDTWTRLAATYRAGNGVT EEECCCCCCCCCEEECCCCCCHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHEECCCCEE LDAQLYYLATRRHWRNAESYALDAAARTVARSDYLEIFHRERQFGERFTARIDSRVFGRA EEEEEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC NRLVVGAEFNQIAFDGANNAPYRGESTVAAAGFDPGAFASPDPTLPRFRTRTHQAAAFIE CEEEEECCCCEEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHH NRLEVLPRLAWVSGLRYDHLSFHRDDLVAGGAFDKTFAHTGWRSGLVYEIAPGLTAYAQY HHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCHHHHHHCCCCCCEEEEECCCCEEHHHH TTGAEGVGSLVTLPASQANYTLATGRQWEAGVKHEIDDARAYWTLAVYDIVKRGLVSVDP CCCCCCCCCEEEECCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC LNPARAQQIGRQSSRGVELAGGVRLPGGVTIDANAALLRARYDAFGQRVGDTVVQRAGNV CCHHHHHHHCCCCCCCEEEECCEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCC PHDIARQTANLWIGWAFAPGWRANAGLRYVGRRYGDDANRVPVPSYTVFDASLAWQATRD CHHHHHHHCCEEEEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCEEEEECHHHHHHHHH VGLALYARNLANRTYAASTSNGGAQWLLGPSRSAELVATLRF HHHHHHHHHHCCCEEEECCCCCCEEEEECCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3079747; 8202364; 9278503; 2823072; 7515827; 8617231; 9856937; 9865695; 10850805 [H]