Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
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Accession | NC_007651 |
Length | 3,809,201 |
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The map label for this gene is 83720582
Identifier: 83720582
GI number: 83720582
Start: 1533555
End: 1534829
Strand: Direct
Name: 83720582
Synonym: BTH_I1355
Alternate gene names: NA
Gene position: 1533555-1534829 (Clockwise)
Preceding gene: 83721637
Following gene: 83719648
Centisome position: 40.26
GC content: 67.22
Gene sequence:
>1275_bases ATGCGCCGGCGCGCATGCGGAGGCAAGGCGATGATTCGCGCCCGCGATTCGATCGTGTCGCTGTGCGGCGTCGTCGCCGG TCAGATTGCGCTCTTCGGCTGCATTTCGCTGATCGGGCGCTTCGAGGGACCGGAGGCGCTGGGCCGCTTCAACTACCTGC TCGCGTTGGCGACGTTCGCCGGCACGCTGCTCGCGTGCCGCTACGAGCTTGCATGCGTGAGCGACAGTCCGGCCGATTCG TTCAACGCGTTCGTCAACGTGATGGCGCTCGGCGCGGCCGTGGTCACGGCGGGCGGCGCGGCGGTCTTCATCGCGGGCCG CGCGGACCTGTACGTCGTCGCCGCATACGGGTTCGCGGTGTTCGTTCAACTCGCCGCGGGCGGTTATCTAAATAGTCTGC GGCGCTACGGCTGGATCGCCGCGAGCCGGATCGCCGTCAACGGGGCGTTTCTCGTCTGCGTTCTCGCCTCGACATTCGCG CCGAGGTTCGGCGTGGAGTTCGGGCCGGTCGATGCGTTCGGCGCATACGCGGCGGTCACGGTGTCGGTCGCGCTGCTGAT GCTGTTCGCGGTCGTGCTGCACGGCAAGCGGCGCGGCTATTCGTTCGCGGTGACGCGTGCGTTCTTCGTCGAGCACAGCC GGTTCGCGAAATACATCCTGCCGTCGACGCTGTGCGGTTCGGTGCTGACCTATGCGCTCGCGATCGTGATTCCGCATTGG TTCGACGCACAGAGCGCCGGTTATTTCGCGGCGGCGTATCGGCTCGGCTTCTTTCCCGTGTCGTTGATCGCGCAGAGCCT GGGCGGCGTGTTCCGGCGCGACGCGATGGCCGCGATGGCGAGAGACGATGCGCATGCGCTGGTGCCGAAGGTGTTCGGCA CGTACGCGCGTTCGCTTGCGCTGCTCGCGGCGGGCTATGCGGCGGGGGGCGCGTTGCTGTTCGCTCCGCTCGTCGAGCTG TTCTTCGGCGCGCGCTGGAGCGGCGCGATCGCGTTCTTCCAATGCATGATCCCGCTTTTCGCGTTCCAGATGATCTATGT GCCGTTGTCGCAGATCTTCCTCGCGGCGCGCGCGCAACGCATCGATTTCCTGTTTCAGCTCGGCTCCGGCATCGTGCTCG CCGGTGCGCTCGGCACGGCGAAGCTCACGGGGCTATCGGCGCTTGCGAGCGTGCGCCTGTTTTCGTTCTCGGGCGCCGTG CTGATGATCGCCGGCATCGCGCTGACATTCGGCGTGATGAACGGCAGCGTGTCGCGCCGGCGCGCCGGGGCATGA
Upstream 100 bases:
>100_bases CTACGTCGCGTACGAATACGGCGCGAAGCACGATGCGTGACGCACACCTCGGGGCGGGCGGACGCGACGGCAGGCGCCGG GTCATGCCGGAGGGCGAGCG
Downstream 100 bases:
>100_bases CGTTTTTTCCACTTCTTCGTTGAGCGCAGATCATGATTGTCGTCGTCGTCGATTCGATGGAGCGTTACTACTTTGCCGCG CGGCTCGTGAAGGCGGTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 424; Mature: 424
Protein sequence:
>424_residues MRRRACGGKAMIRARDSIVSLCGVVAGQIALFGCISLIGRFEGPEALGRFNYLLALATFAGTLLACRYELACVSDSPADS FNAFVNVMALGAAVVTAGGAAVFIAGRADLYVVAAYGFAVFVQLAAGGYLNSLRRYGWIAASRIAVNGAFLVCVLASTFA PRFGVEFGPVDAFGAYAAVTVSVALLMLFAVVLHGKRRGYSFAVTRAFFVEHSRFAKYILPSTLCGSVLTYALAIVIPHW FDAQSAGYFAAAYRLGFFPVSLIAQSLGGVFRRDAMAAMARDDAHALVPKVFGTYARSLALLAAGYAAGGALLFAPLVEL FFGARWSGAIAFFQCMIPLFAFQMIYVPLSQIFLAARAQRIDFLFQLGSGIVLAGALGTAKLTGLSALASVRLFSFSGAV LMIAGIALTFGVMNGSVSRRRAGA
Sequences:
>Translated_424_residues MRRRACGGKAMIRARDSIVSLCGVVAGQIALFGCISLIGRFEGPEALGRFNYLLALATFAGTLLACRYELACVSDSPADS FNAFVNVMALGAAVVTAGGAAVFIAGRADLYVVAAYGFAVFVQLAAGGYLNSLRRYGWIAASRIAVNGAFLVCVLASTFA PRFGVEFGPVDAFGAYAAVTVSVALLMLFAVVLHGKRRGYSFAVTRAFFVEHSRFAKYILPSTLCGSVLTYALAIVIPHW FDAQSAGYFAAAYRLGFFPVSLIAQSLGGVFRRDAMAAMARDDAHALVPKVFGTYARSLALLAAGYAAGGALLFAPLVEL FFGARWSGAIAFFQCMIPLFAFQMIYVPLSQIFLAARAQRIDFLFQLGSGIVLAGALGTAKLTGLSALASVRLFSFSGAV LMIAGIALTFGVMNGSVSRRRAGA >Mature_424_residues MRRRACGGKAMIRARDSIVSLCGVVAGQIALFGCISLIGRFEGPEALGRFNYLLALATFAGTLLACRYELACVSDSPADS FNAFVNVMALGAAVVTAGGAAVFIAGRADLYVVAAYGFAVFVQLAAGGYLNSLRRYGWIAASRIAVNGAFLVCVLASTFA PRFGVEFGPVDAFGAYAAVTVSVALLMLFAVVLHGKRRGYSFAVTRAFFVEHSRFAKYILPSTLCGSVLTYALAIVIPHW FDAQSAGYFAAAYRLGFFPVSLIAQSLGGVFRRDAMAAMARDDAHALVPKVFGTYARSLALLAAGYAAGGALLFAPLVEL FFGARWSGAIAFFQCMIPLFAFQMIYVPLSQIFLAARAQRIDFLFQLGSGIVLAGALGTAKLTGLSALASVRLFSFSGAV LMIAGIALTFGVMNGSVSRRRAGA
Specific function: Unknown
COG id: COG2244
COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44641; Mature: 44641
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRRACGGKAMIRARDSIVSLCGVVAGQIALFGCISLIGRFEGPEALGRFNYLLALATFA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH GTLLACRYELACVSDSPADSFNAFVNVMALGAAVVTAGGAAVFIAGRADLYVVAAYGFAV HHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEHHHHHHH FVQLAAGGYLNSLRRYGWIAASRIAVNGAFLVCVLASTFAPRFGVEFGPVDAFGAYAAVT HHHHHCCHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH VSVALLMLFAVVLHGKRRGYSFAVTRAFFVEHSRFAKYILPSTLCGSVLTYALAIVIPHW HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC FDAQSAGYFAAAYRLGFFPVSLIAQSLGGVFRRDAMAAMARDDAHALVPKVFGTYARSLA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH LLAAGYAAGGALLFAPLVELFFGARWSGAIAFFQCMIPLFAFQMIYVPLSQIFLAARAQR HHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IDFLFQLGSGIVLAGALGTAKLTGLSALASVRLFSFSGAVLMIAGIALTFGVMNGSVSRR HHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHH RAGA CCCC >Mature Secondary Structure MRRRACGGKAMIRARDSIVSLCGVVAGQIALFGCISLIGRFEGPEALGRFNYLLALATFA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH GTLLACRYELACVSDSPADSFNAFVNVMALGAAVVTAGGAAVFIAGRADLYVVAAYGFAV HHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEHHHHHHH FVQLAAGGYLNSLRRYGWIAASRIAVNGAFLVCVLASTFAPRFGVEFGPVDAFGAYAAVT HHHHHCCHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH VSVALLMLFAVVLHGKRRGYSFAVTRAFFVEHSRFAKYILPSTLCGSVLTYALAIVIPHW HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC FDAQSAGYFAAAYRLGFFPVSLIAQSLGGVFRRDAMAAMARDDAHALVPKVFGTYARSLA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH LLAAGYAAGGALLFAPLVELFFGARWSGAIAFFQCMIPLFAFQMIYVPLSQIFLAARAQR HHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IDFLFQLGSGIVLAGALGTAKLTGLSALASVRLFSFSGAVLMIAGIALTFGVMNGSVSRR HHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHH RAGA CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA