| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is 83720526
Identifier: 83720526
GI number: 83720526
Start: 2327068
End: 2328288
Strand: Reverse
Name: 83720526
Synonym: BTH_I2054
Alternate gene names: NA
Gene position: 2328288-2327068 (Counterclockwise)
Preceding gene: 83720411
Following gene: 83721459
Centisome position: 61.12
GC content: 75.92
Gene sequence:
>1221_bases ATGGACTCGCTGATCACGGCCGCGGCGCGCGCGCTCGCGGCGGGTGATCCGCTCGGCGCGCTGAACCGCGTCGCGCTGCG CGACGATGCGCCGGCGCTCGCGCTGCGCGGCGTCGCGATGGCGCAGCTCGGCGATTTCGCGCGGGCGAAGGCGCTCGTGC GGCGCGCGGCCCGCGCCTTCGGCCCGAACGAGGCGCTCGCCCGTGCGCGATGCGTCGTCGCAGAAGCCGAGATCGCGCTC GCGGCGCGCGAGCTCGGCTGGCCCGAGCAAGCGCTCGACGCGGCGCGCGCGACGCTCGACGCGCACGGCGACCGCGTCAA CGCCGCGCATGCGCGGTATCTCGCGGTCCGTCGCCTGTTGCTGATCGGCCGCGTCGGCGAAGCCGAGCGCAGGCTCGCCA CGCTCGATTTCGCCGCCTGCCCGCCCGCGCTGCGGGCCGCGCACGAGTTGATCGTCGCGGGCATCGCGCTGCGTCGCATC GAGACGAAGCCCGCGCGCGCGGCGCTCGCCCGCGCCGAACGCGCGGCGCGCGACGCCGGCATTCCCGCGCTCGCCGCCGA AGTCGAGCATGCGTTTCGCGCCCTCGACGCGCCGGCCGCGCGCCTCGTCGCGTGCGGCGAAACACGCGCGCTGCGGCTCG ACGAAGTCGAGGCGTGGCGCGCATCGGCATCGCTCGTCGTCGACGCGTGCCGCCACGTCGTGCACGATGCGCGCACGACG GTCTCGCTCGCGAAACGCCCCGTGCTGTTCGCGCTCGCGCGCGCGCTCGGCGAAGCGTGGCCTGGCGACGTCCCGCGCGA GGCGCTCGTCGCCCGTGCGTTCCGCGCGAAGCACATGGACGAATCGCACCGCGCGCGGCTGCGCGTCGAGATCGGACGGC TGCGCGCGCTGCTCGGCGAACTGGCCGACATTCGCGCGACGAAGCGAGGATTCGCGCTGACGCCGCGCGAAGCGCGCGAT GTGGCCGTGCTCACGCACCTCGTCGAAGACGCGCACGCGGCGGTGCTCGCCCTCCTCGCCGACGGCGAGTCGTGGTCGAG TTCCGCGCTTGCGCTCGCGCTCGGCGCAAGCCAGCGCACCGTGCAACGCTCGCTCGACGCGCTCGCGGCGGCCGGCAACG CGCAGTCGTTCGGCCGCGGCCGCGCACGCCGCTGGACGACCCCGCCCGCGCCGGGATTCGCGACGATCTTGTTACTCCCG GCCCCGCTGCCGGGCGATTAG
Upstream 100 bases:
>100_bases TCGATCGGTCCGCGATCCGGCGCGCCGGTTGCGTGATCGCGCAGTGGTAGATTAGTTGCGGGCTTCGAACGGTGGGAGTG ACAAGCGTGGCGGGATTCCG
Downstream 100 bases:
>100_bases GATGACGTCATCGAACAGCCGGGAGACGGACATGAAGCAATCGACCGCCGAGATCATTCAGGAATACGGTCCTTTTCCGG GCGTCGACGGCGTGCACGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 406; Mature: 406
Protein sequence:
>406_residues MDSLITAAARALAAGDPLGALNRVALRDDAPALALRGVAMAQLGDFARAKALVRRAARAFGPNEALARARCVVAEAEIAL AARELGWPEQALDAARATLDAHGDRVNAAHARYLAVRRLLLIGRVGEAERRLATLDFAACPPALRAAHELIVAGIALRRI ETKPARAALARAERAARDAGIPALAAEVEHAFRALDAPAARLVACGETRALRLDEVEAWRASASLVVDACRHVVHDARTT VSLAKRPVLFALARALGEAWPGDVPREALVARAFRAKHMDESHRARLRVEIGRLRALLGELADIRATKRGFALTPREARD VAVLTHLVEDAHAAVLALLADGESWSSSALALALGASQRTVQRSLDALAAAGNAQSFGRGRARRWTTPPAPGFATILLLP APLPGD
Sequences:
>Translated_406_residues MDSLITAAARALAAGDPLGALNRVALRDDAPALALRGVAMAQLGDFARAKALVRRAARAFGPNEALARARCVVAEAEIAL AARELGWPEQALDAARATLDAHGDRVNAAHARYLAVRRLLLIGRVGEAERRLATLDFAACPPALRAAHELIVAGIALRRI ETKPARAALARAERAARDAGIPALAAEVEHAFRALDAPAARLVACGETRALRLDEVEAWRASASLVVDACRHVVHDARTT VSLAKRPVLFALARALGEAWPGDVPREALVARAFRAKHMDESHRARLRVEIGRLRALLGELADIRATKRGFALTPREARD VAVLTHLVEDAHAAVLALLADGESWSSSALALALGASQRTVQRSLDALAAAGNAQSFGRGRARRWTTPPAPGFATILLLP APLPGD >Mature_406_residues MDSLITAAARALAAGDPLGALNRVALRDDAPALALRGVAMAQLGDFARAKALVRRAARAFGPNEALARARCVVAEAEIAL AARELGWPEQALDAARATLDAHGDRVNAAHARYLAVRRLLLIGRVGEAERRLATLDFAACPPALRAAHELIVAGIALRRI ETKPARAALARAERAARDAGIPALAAEVEHAFRALDAPAARLVACGETRALRLDEVEAWRASASLVVDACRHVVHDARTT VSLAKRPVLFALARALGEAWPGDVPREALVARAFRAKHMDESHRARLRVEIGRLRALLGELADIRATKRGFALTPREARD VAVLTHLVEDAHAAVLALLADGESWSSSALALALGASQRTVQRSLDALAAAGNAQSFGRGRARRWTTPPAPGFATILLLP APLPGD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42990; Mature: 42990
Theoretical pI: Translated: 11.31; Mature: 11.31
Prosite motif: PS00639 THIOL_PROTEASE_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSLITAAARALAAGDPLGALNRVALRDDAPALALRGVAMAQLGDFARAKALVRRAARAF CCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GPNEALARARCVVAEAEIALAARELGWPEQALDAARATLDAHGDRVNAAHARYLAVRRLL CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH LIGRVGEAERRLATLDFAACPPALRAAHELIVAGIALRRIETKPARAALARAERAARDAG HHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC IPALAAEVEHAFRALDAPAARLVACGETRALRLDEVEAWRASASLVVDACRHVVHDARTT CHHHHHHHHHHHHHHCCCHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSLAKRPVLFALARALGEAWPGDVPREALVARAFRAKHMDESHRARLRVEIGRLRALLGE HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH LADIRATKRGFALTPREARDVAVLTHLVEDAHAAVLALLADGESWSSSALALALGASQRT HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHH VQRSLDALAAAGNAQSFGRGRARRWTTPPAPGFATILLLPAPLPGD HHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCC >Mature Secondary Structure MDSLITAAARALAAGDPLGALNRVALRDDAPALALRGVAMAQLGDFARAKALVRRAARAF CCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GPNEALARARCVVAEAEIALAARELGWPEQALDAARATLDAHGDRVNAAHARYLAVRRLL CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH LIGRVGEAERRLATLDFAACPPALRAAHELIVAGIALRRIETKPARAALARAERAARDAG HHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC IPALAAEVEHAFRALDAPAARLVACGETRALRLDEVEAWRASASLVVDACRHVVHDARTT CHHHHHHHHHHHHHHCCCHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSLAKRPVLFALARALGEAWPGDVPREALVARAFRAKHMDESHRARLRVEIGRLRALLGE HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH LADIRATKRGFALTPREARDVAVLTHLVEDAHAAVLALLADGESWSSSALALALGASQRT HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHH VQRSLDALAAAGNAQSFGRGRARRWTTPPAPGFATILLLPAPLPGD HHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA