Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
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Accession | NC_007651 |
Length | 3,809,201 |
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The map label for this gene is serC [H]
Identifier: 83720170
GI number: 83720170
Start: 1841471
End: 1842553
Strand: Direct
Name: serC [H]
Synonym: BTH_I1634
Alternate gene names: 83720170
Gene position: 1841471-1842553 (Clockwise)
Preceding gene: 83721229
Following gene: 83719222
Centisome position: 48.34
GC content: 63.8
Gene sequence:
>1083_bases ATGCGCGTCTTTAATTTCTCCGCCGGTCCCGCGGCGATGCCCGAGGAAGTGCTGCGCCAGGCGGCCGCCGAAATGCTCGA CTGGAACGGCAGCGGCATGAGCGTGATGGAAATGAGCCATCGCGGCAAGGAATTCATGTCGATCCACGAGGCGGCGCTCG CCGACCTGCGCGAGTTGCTCGACGTGCCCGCGAACTACCGGATTCTGTTCCTGCAGGGCGGGGGGATCGCCGAGAACGCG ATCGTGCCGATGAATCTGCTCGGCTCGCGCGCGACGGCCGACTTCGTCATCACGGGCTCGTGGTCGCAGAAGTCGTTCAA CGAGGCGAAGAAATACTGCACGCCGCATCTCGCCGCGACGGGCAAGACGGACGCGGGCTACACGCGCGTGCCGGCGTTCT CCGAATGGCGGATGTCCGACGATCCGGCGTATGTGCACCTGTGCACGAACGAGACGATCGACGGCGTCGAGACGTTCGAC ATCCCCGATCTCGGCAGCGTGCCGCTCGTCGCCGACGTGTCGTCGCACATCCTGTCGCGTCCGATCGAGATCGGGAAGTA TGGTGCGATCTTCGGCGGCGCGCAGAAGAACATCGGAATGGCGGGCGTGACGCTCGTGATCGTGCGCGAGGATTTGCTCG ACCGAGCGCTGTCGATCTGCCCGTCGGCATTCGAATGGAAGACGGTCGCGCTCAACAACTCGCTCTACAATACGCCGCCC ACCTACGCGATCTACATCGCGGGGCTCGTGTTCAAGTGGCTCAAGGCGCAGGGTGGCCTGGCCGAGATCGAGAAGCGCAA CGTCGAAAAATCGAAGCTGCTGTACGACGCGATCGACGCGAGCAGCTTCTATCTGAACAAGGTCGAGAAATCGGCGCGTT CGCGGATGAACGTGCCGTTCTTCCTCGCCGACGAATCGCGCAACGAAGACTTCCTCGCCGGCGCTAAAGAGCGCGGGCTG CTGCAGTTGAAGGGCCACAAGTCCGTCGGCGGCATGCGGGCGTCGATCTACAACGCGGTGCCGCTCGCGGGCGTGCAGGC GCTCGTCGAGTACATGAAGGATTTCGAGCGGCGCTGCGCGTGA
Upstream 100 bases:
>100_bases ATAATGGCCGTTTGCGCAACAGCGCAAGCGGCCATTTTCTTTTCCCGCGCGGCATTCGCGCCGATTCGAAGCGGCCGGGT TCCTTCCGAGGTTTTTCACG
Downstream 100 bases:
>100_bases CGCGCGCCGCTCCTCACGCATTGCTGGTCAATTCATGGACGACGAACTCAATTCCCGCCTGAAGCCTCTGCGCGAGCGCA TCGACGCGATCGACACGCAA
Product: phosphoserine aminotransferase
Products: NA
Alternate protein names: Phosphohydroxythreonine aminotransferase; PSAT [H]
Number of amino acids: Translated: 360; Mature: 360
Protein sequence:
>360_residues MRVFNFSAGPAAMPEEVLRQAAAEMLDWNGSGMSVMEMSHRGKEFMSIHEAALADLRELLDVPANYRILFLQGGGIAENA IVPMNLLGSRATADFVITGSWSQKSFNEAKKYCTPHLAATGKTDAGYTRVPAFSEWRMSDDPAYVHLCTNETIDGVETFD IPDLGSVPLVADVSSHILSRPIEIGKYGAIFGGAQKNIGMAGVTLVIVREDLLDRALSICPSAFEWKTVALNNSLYNTPP TYAIYIAGLVFKWLKAQGGLAEIEKRNVEKSKLLYDAIDASSFYLNKVEKSARSRMNVPFFLADESRNEDFLAGAKERGL LQLKGHKSVGGMRASIYNAVPLAGVQALVEYMKDFERRCA
Sequences:
>Translated_360_residues MRVFNFSAGPAAMPEEVLRQAAAEMLDWNGSGMSVMEMSHRGKEFMSIHEAALADLRELLDVPANYRILFLQGGGIAENA IVPMNLLGSRATADFVITGSWSQKSFNEAKKYCTPHLAATGKTDAGYTRVPAFSEWRMSDDPAYVHLCTNETIDGVETFD IPDLGSVPLVADVSSHILSRPIEIGKYGAIFGGAQKNIGMAGVTLVIVREDLLDRALSICPSAFEWKTVALNNSLYNTPP TYAIYIAGLVFKWLKAQGGLAEIEKRNVEKSKLLYDAIDASSFYLNKVEKSARSRMNVPFFLADESRNEDFLAGAKERGL LQLKGHKSVGGMRASIYNAVPLAGVQALVEYMKDFERRCA >Mature_360_residues MRVFNFSAGPAAMPEEVLRQAAAEMLDWNGSGMSVMEMSHRGKEFMSIHEAALADLRELLDVPANYRILFLQGGGIAENA IVPMNLLGSRATADFVITGSWSQKSFNEAKKYCTPHLAATGKTDAGYTRVPAFSEWRMSDDPAYVHLCTNETIDGVETFD IPDLGSVPLVADVSSHILSRPIEIGKYGAIFGGAQKNIGMAGVTLVIVREDLLDRALSICPSAFEWKTVALNNSLYNTPP TYAIYIAGLVFKWLKAQGGLAEIEKRNVEKSKLLYDAIDASSFYLNKVEKSARSRMNVPFFLADESRNEDFLAGAKERGL LQLKGHKSVGGMRASIYNAVPLAGVQALVEYMKDFERRCA
Specific function: Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine [H]
COG id: COG1932
COG function: function code HE; Phosphoserine aminotransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily [H]
Homologues:
Organism=Homo sapiens, GI17402893, Length=361, Percent_Identity=48.1994459833795, Blast_Score=343, Evalue=1e-94, Organism=Homo sapiens, GI10863955, Length=357, Percent_Identity=43.6974789915966, Blast_Score=293, Evalue=2e-79, Organism=Escherichia coli, GI1787136, Length=358, Percent_Identity=55.3072625698324, Blast_Score=413, Evalue=1e-117, Organism=Caenorhabditis elegans, GI17506897, Length=362, Percent_Identity=46.4088397790055, Blast_Score=337, Evalue=5e-93, Organism=Saccharomyces cerevisiae, GI6324758, Length=386, Percent_Identity=40.1554404145078, Blast_Score=277, Evalue=2e-75, Organism=Drosophila melanogaster, GI21356589, Length=362, Percent_Identity=50.2762430939227, Blast_Score=368, Evalue=1e-102,
Paralogues:
None
Copy number: 2500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000192 - InterPro: IPR020578 - InterPro: IPR022278 - InterPro: IPR003248 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00266 Aminotran_5 [H]
EC number: =2.6.1.52 [H]
Molecular weight: Translated: 39494; Mature: 39494
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: PS00595 AA_TRANSFER_CLASS_5
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVFNFSAGPAAMPEEVLRQAAAEMLDWNGSGMSVMEMSHRGKEFMSIHEAALADLRELL CEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHH DVPANYRILFLQGGGIAENAIVPMNLLGSRATADFVITGSWSQKSFNEAKKYCTPHLAAT CCCCCEEEEEEECCCCCCCCEECHHHHCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCC GKTDAGYTRVPAFSEWRMSDDPAYVHLCTNETIDGVETFDIPDLGSVPLVADVSSHILSR CCCCCCCEECCCCCCCCCCCCCCEEEEECCCCCCCCEECCCCCCCCCCHHHHHHHHHHHC PIEIGKYGAIFGGAQKNIGMAGVTLVIVREDLLDRALSICPSAFEWKTVALNNSLYNTPP CHHCCCCCEEECCCCCCCCCCCEEEEEEHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCC TYAIYIAGLVFKWLKAQGGLAEIEKRNVEKSKLLYDAIDASSFYLNKVEKSARSRMNVPF HHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCE FLADESRNEDFLAGAKERGLLQLKGHKSVGGMRASIYNAVPLAGVQALVEYMKDFERRCA EEECCCCCCHHHCCCCCCCEEEEECCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRVFNFSAGPAAMPEEVLRQAAAEMLDWNGSGMSVMEMSHRGKEFMSIHEAALADLRELL CEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHH DVPANYRILFLQGGGIAENAIVPMNLLGSRATADFVITGSWSQKSFNEAKKYCTPHLAAT CCCCCEEEEEEECCCCCCCCEECHHHHCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCC GKTDAGYTRVPAFSEWRMSDDPAYVHLCTNETIDGVETFDIPDLGSVPLVADVSSHILSR CCCCCCCEECCCCCCCCCCCCCCEEEEECCCCCCCCEECCCCCCCCCCHHHHHHHHHHHC PIEIGKYGAIFGGAQKNIGMAGVTLVIVREDLLDRALSICPSAFEWKTVALNNSLYNTPP CHHCCCCCEEECCCCCCCCCCCEEEEEEHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCC TYAIYIAGLVFKWLKAQGGLAEIEKRNVEKSKLLYDAIDASSFYLNKVEKSARSRMNVPF HHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCE FLADESRNEDFLAGAKERGLLQLKGHKSVGGMRASIYNAVPLAGVQALVEYMKDFERRCA EEECCCCCCHHHCCCCCCCEEEEECCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA