Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
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Accession | NC_007651 |
Length | 3,809,201 |
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The map label for this gene is mpl [H]
Identifier: 83719762
GI number: 83719762
Start: 1312675
End: 1314087
Strand: Direct
Name: mpl [H]
Synonym: BTH_I1168
Alternate gene names: 83719762
Gene position: 1312675-1314087 (Clockwise)
Preceding gene: 83719496
Following gene: 83719051
Centisome position: 34.46
GC content: 66.74
Gene sequence:
>1413_bases ATGCATATCCACATTCTCGGCATCTGCGGCACCTTCATGGGTGGTCTGGCCGTGCTCGCCCGCGCGGCGGGCCATACGGT GACCGGTTGCGACGCAGGCGTCTATCCGCCGATGAGCACGCAGCTCGAGGCGCAGGGCATCCGGCTGATCGAGGGCTACG GCGCGGAACAGATCGACCTGAAGCCCGATCTGTTCGTGATCGGCAACGTGGTGTCGCGCGGCAACCCGCTGATGGAGGCG ATCCTCGATCGAGGGTTGCCTTACGTGTCCGGACCGCAATGGCTTGGCGAGCATGTGCTTGCAGGTAAGTGGGTGCTCGC TGTCGCCGGTACGCACGGCAAGACGACGACGAGTTCGATGCTCGCGTGGATTCTCGAAGACGCCGGCCTGAATCCGGGCT TCCTGATCGGCGGTGTGCCGCTGAACTTCGGTGTGTCCGCGCGGCTCACCGATTCGAGCTTCTTCGTGATCGAGGCGGAC GAGTACGACACGGCGTTCTTCGATAAGCGTTCGAAATTCGTCCATTACCGGCCTCGAACCGCGATCCTGAATAACCTCGA ATTCGATCATGCCGATATCTTTCCAGATCTTGCCGCGATCGAGACTCAATTTCATCATTTGGTGCGCACGGTGCCGAGCG TCGGCCGGCTCGTGACGAACGGCCGTGAAGACGCGCTCGAGCGCGTGCTGTCGCGCGGTTGCTGGAGCGATGTCGAGCGC TTCGGCGTCGACGGCGGGTGGCAGGCGTTGCCCGCGGAGGACGGCGTGCCGGCCGACGAGCGCTTCGCCGTGTACTGGCG CAGCGAGCGCGTCGGCGCCGTCGACTGGCACGTGCAAGGCGAACACAACCGGATGAATGCACTTGCGGCGATCGCGGCCG CGCGTCACGTGGGCGTGCCGCCCGCGCAGGCGGCCACGGCGCTCGCGACGTTTCGCAACGTCAAGCGCCGGATGGAAGTG CGCGGCAGCGTCGACGGCGTGACTGTCTACGACGATTTCGCACATCACCCGACCGCGATCGAGACGACGATCGCCGGGCT TCGCGCGCGCATCGGTCGTGAAAATACTCGCATCCTCGCCGTGCTGGAGCCGCGATCGAACACGATGAAGCTCGGCGTGA TGAAGGCGCAGCTGCCGGCGAGCCTCGCCGATGCGGATCTCGTATTCGGCTACGGCGCGCCGAGCGGCCGCGACGCGCTC GGCTGGAGCCTGCCGGACGCGCTCGCGCCGCTCGGCGACAAGGCGCGCGCTTTCGACGATCTGCACGCGCTCGTGAAGGC CGTGACGGTGTCGGCGCGGCCGGGCGACCACGTGCTCGTGATGAGCAACGGCGGCTTCGGCGGCGTCCACCAGAAGTTGC TCGACGCGCTGTCTGCGCGTGGCGACGCGGCGCCGGCCCGGGGCAGCATGTGA
Upstream 100 bases:
>100_bases GCGCGGCGTCGCGCGCGCCGCGTCGCGCATGTTTTTCCGGCAACCGGCGCAATGCGCGGCCGGTCTCCGATTCGACTACG CCCATGCGGCGCGAAGCTCT
Downstream 100 bases:
>100_bases TCCTGTATCTGCACGGCTTTCGTTCGTCGCCGCAGTCGTTCAAGGCGCGCGCGCTGGCTGCGCGGCTCGACGAACTCGGC CGTGCGCACGAATGGCGCTG
Product: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase
Products: NA
Alternate protein names: Murein peptide ligase [H]
Number of amino acids: Translated: 470; Mature: 470
Protein sequence:
>470_residues MHIHILGICGTFMGGLAVLARAAGHTVTGCDAGVYPPMSTQLEAQGIRLIEGYGAEQIDLKPDLFVIGNVVSRGNPLMEA ILDRGLPYVSGPQWLGEHVLAGKWVLAVAGTHGKTTTSSMLAWILEDAGLNPGFLIGGVPLNFGVSARLTDSSFFVIEAD EYDTAFFDKRSKFVHYRPRTAILNNLEFDHADIFPDLAAIETQFHHLVRTVPSVGRLVTNGREDALERVLSRGCWSDVER FGVDGGWQALPAEDGVPADERFAVYWRSERVGAVDWHVQGEHNRMNALAAIAAARHVGVPPAQAATALATFRNVKRRMEV RGSVDGVTVYDDFAHHPTAIETTIAGLRARIGRENTRILAVLEPRSNTMKLGVMKAQLPASLADADLVFGYGAPSGRDAL GWSLPDALAPLGDKARAFDDLHALVKAVTVSARPGDHVLVMSNGGFGGVHQKLLDALSARGDAAPARGSM
Sequences:
>Translated_470_residues MHIHILGICGTFMGGLAVLARAAGHTVTGCDAGVYPPMSTQLEAQGIRLIEGYGAEQIDLKPDLFVIGNVVSRGNPLMEA ILDRGLPYVSGPQWLGEHVLAGKWVLAVAGTHGKTTTSSMLAWILEDAGLNPGFLIGGVPLNFGVSARLTDSSFFVIEAD EYDTAFFDKRSKFVHYRPRTAILNNLEFDHADIFPDLAAIETQFHHLVRTVPSVGRLVTNGREDALERVLSRGCWSDVER FGVDGGWQALPAEDGVPADERFAVYWRSERVGAVDWHVQGEHNRMNALAAIAAARHVGVPPAQAATALATFRNVKRRMEV RGSVDGVTVYDDFAHHPTAIETTIAGLRARIGRENTRILAVLEPRSNTMKLGVMKAQLPASLADADLVFGYGAPSGRDAL GWSLPDALAPLGDKARAFDDLHALVKAVTVSARPGDHVLVMSNGGFGGVHQKLLDALSARGDAAPARGSM >Mature_470_residues MHIHILGICGTFMGGLAVLARAAGHTVTGCDAGVYPPMSTQLEAQGIRLIEGYGAEQIDLKPDLFVIGNVVSRGNPLMEA ILDRGLPYVSGPQWLGEHVLAGKWVLAVAGTHGKTTTSSMLAWILEDAGLNPGFLIGGVPLNFGVSARLTDSSFFVIEAD EYDTAFFDKRSKFVHYRPRTAILNNLEFDHADIFPDLAAIETQFHHLVRTVPSVGRLVTNGREDALERVLSRGCWSDVER FGVDGGWQALPAEDGVPADERFAVYWRSERVGAVDWHVQGEHNRMNALAAIAAARHVGVPPAQAATALATFRNVKRRMEV RGSVDGVTVYDDFAHHPTAIETTIAGLRARIGRENTRILAVLEPRSNTMKLGVMKAQLPASLADADLVFGYGAPSGRDAL GWSLPDALAPLGDKARAFDDLHALVKAVTVSARPGDHVLVMSNGGFGGVHQKLLDALSARGDAAPARGSM
Specific function: Reutilizes the intact tripeptide L-alanyl-gamma-D- glutamyl-meso-diaminopimelate by linking it to UDP-N-acetylmuramic acid [H]
COG id: COG0773
COG function: function code M; UDP-N-acetylmuramate-alanine ligase
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MurCDEF family [H]
Homologues:
Organism=Escherichia coli, GI1790680, Length=464, Percent_Identity=58.6206896551724, Blast_Score=538, Evalue=1e-154, Organism=Escherichia coli, GI1786279, Length=305, Percent_Identity=29.1803278688525, Blast_Score=104, Evalue=1e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004101 - InterPro: IPR013221 - InterPro: IPR000713 - InterPro: IPR005757 - InterPro: IPR016040 [H]
Pfam domain/function: PF01225 Mur_ligase; PF02875 Mur_ligase_C; PF08245 Mur_ligase_M [H]
EC number: 6.3.2.- [C]
Molecular weight: Translated: 50413; Mature: 50413
Theoretical pI: Translated: 6.56; Mature: 6.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHIHILGICGTFMGGLAVLARAAGHTVTGCDAGVYPPMSTQLEAQGIRLIEGYGAEQIDL CEEEEEEHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCEEEEECCCCCEECC KPDLFVIGNVVSRGNPLMEAILDRGLPYVSGPQWLGEHVLAGKWVLAVAGTHGKTTTSSM CCCEEEEECHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCHHHHH LAWILEDAGLNPGFLIGGVPLNFGVSARLTDSSFFVIEADEYDTAFFDKRSKFVHYRPRT HHHHHHHCCCCCCEEEECCCCCCCCEEEEECCEEEEEECCCCCCHHHHCCCCEEEECCHH AILNNLEFDHADIFPDLAAIETQFHHLVRTVPSVGRLVTNGREDALERVLSRGCWSDVER HHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHH FGVDGGWQALPAEDGVPADERFAVYWRSERVGAVDWHVQGEHNRMNALAAIAAARHVGVP HCCCCCCEECCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCC PAQAATALATFRNVKRRMEVRGSVDGVTVYDDFAHHPTAIETTIAGLRARIGRENTRILA CHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEE VLEPRSNTMKLGVMKAQLPASLADADLVFGYGAPSGRDALGWSLPDALAPLGDKARAFDD EECCCCCCEEEEEEEHHCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHCCCCCHHHHHHH LHALVKAVTVSARPGDHVLVMSNGGFGGVHQKLLDALSARGDAAPARGSM HHHHHHHHEEECCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MHIHILGICGTFMGGLAVLARAAGHTVTGCDAGVYPPMSTQLEAQGIRLIEGYGAEQIDL CEEEEEEHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCEEEEECCCCCEECC KPDLFVIGNVVSRGNPLMEAILDRGLPYVSGPQWLGEHVLAGKWVLAVAGTHGKTTTSSM CCCEEEEECHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCHHHHH LAWILEDAGLNPGFLIGGVPLNFGVSARLTDSSFFVIEADEYDTAFFDKRSKFVHYRPRT HHHHHHHCCCCCCEEEECCCCCCCCEEEEECCEEEEEECCCCCCHHHHCCCCEEEECCHH AILNNLEFDHADIFPDLAAIETQFHHLVRTVPSVGRLVTNGREDALERVLSRGCWSDVER HHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHH FGVDGGWQALPAEDGVPADERFAVYWRSERVGAVDWHVQGEHNRMNALAAIAAARHVGVP HCCCCCCEECCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCC PAQAATALATFRNVKRRMEVRGSVDGVTVYDDFAHHPTAIETTIAGLRARIGRENTRILA CHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEE VLEPRSNTMKLGVMKAQLPASLADADLVFGYGAPSGRDALGWSLPDALAPLGDKARAFDD EECCCCCCEEEEEEEHHCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHCCCCCHHHHHHH LHALVKAVTVSARPGDHVLVMSNGGFGGVHQKLLDALSARGDAAPARGSM HHHHHHHHEEECCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503; 2843822; 7984428; 8808921 [H]