| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
Click here to switch to the map view.
The map label for this gene is ygaZ [C]
Identifier: 83719423
GI number: 83719423
Start: 1901512
End: 1902261
Strand: Reverse
Name: ygaZ [C]
Synonym: BTH_I1691
Alternate gene names: 83719423
Gene position: 1902261-1901512 (Counterclockwise)
Preceding gene: 83719257
Following gene: 83720148
Centisome position: 49.94
GC content: 72.4
Gene sequence:
>750_bases GTGTCCCAGTTCCGCCCCACGCATCCCCCGCCCGGCCGGCTCGCCGAGTTCGCCGCCGGCGTGCGCGACACCATCCCGAT GATGGTGGGCGCCGCGCCCTTCGGCATGATCTTCGGCACGCTCGTCACGACCGGCCCGCTCGCGCCGTGGCACGGCGAGC TGATGTCGCTCGCGCTGTTCGCGGGCTCCGCGCAGTTCATCGCACTCGGCCTGATCGCGGGCGGCGCGAGCTACGCGGTC GTGCTCGCGACGACGTTCATCGTCAATCTGCGCCACCTGCTGTACAGCGCGGCGCTCGCGCCGTATGTCGCGCATCTGCC GCTGCGGTGGCGGGCGACGCTCGGCGCGCTGATGACCGACGAAGTGTTCGCCGTCGCCCATGCGCACTATCGTCACGCCG AACCCGGCGCGACCGGGCCATACCACTTCTTCGGCTCGGGCATCGCGATGTACGCGAACTGGCAGATCTGGACGATCGCG GGCCTGCTGTTCGGCGCCGCGTTCCCGCGTCTGCAATCGCTCGGCCTCGATTTCGCGATGGCGGCGACGTTCATCGCGAT CGTCGTGCCGCAACTCGCGGCGCCGCCCTATCTCGCCGCCGCGGTGACGGCGGGCGCGGCCGCGTTCTTCTGCCGTGCAT GGCCGTACAAGCTCGGCCTGCTCGCCGCCGTCGCGGCGGGCGTCGCGATCGGCGTCGCGCTGACGTGGCTCGACGGGCAG CGCGCGCGCCGGCGGGCGGAGGTCGCGTGA
Upstream 100 bases:
>100_bases GTAACGGCACCGGCAAAGACAGCATCAACGACGGCGCAAGAACGTACAAGCGAGCGCCTCCCCCGCTCCGCTATCCTCCG CCGAACAGGAGGTAGCCATC
Downstream 100 bases:
>100_bases TGAGCTACGCGCTGCTGATTCTCAGCATGGCGACACTCACGTACGCGATCCGCACGACGCTCTTCCTGCTCGGCGATCGC CTCGTGTTTCCGCCGCTCGC
Product: AzlC family protein
Products: NA
Alternate protein names: Branched-Chain Amino Acid Permease; Branched-Chain Amino Acid Transport Protein AzlC; AzlC-Like; AzlC Protein; AzlC-Like Protein; Branched-Chain Amino Acid Transporter; Amino Acid Permease; Inner Membrane Protein; AzlC Family Branched-Chain Amino Acid Transporter; Branched-Chain Amino Acid Transporter Protein; Branched-Chain Amino Acid Permease AzlC; Azaleucine Resistance Protein AzlC; Branched Chain Amino Acid ABC Transporter; Branched-Chain Amino Acid Permease Protein; AzlC-Like Family Protein; Branched Chain Amino Acid Efflux Pump LivE; Transport Protein-Like Protein; AzlC Family; Branched-Chain Amino Acid Exporter LIV- E Family; LIV-E Family Branched Chain Amino Acid Exporter; Branched Chain Amino Acid Exporter Family Protein; Integral Membrane Protein; AzlC Family Transmembrane Protein; Azlc Family Protein; Branched-Chain Amino Acid Permease AzlC Family Protein; Branched Chain Aminoacid Transporter; Branched Chain Amino Acid ABC Transporter Permease
Number of amino acids: Translated: 249; Mature: 248
Protein sequence:
>249_residues MSQFRPTHPPPGRLAEFAAGVRDTIPMMVGAAPFGMIFGTLVTTGPLAPWHGELMSLALFAGSAQFIALGLIAGGASYAV VLATTFIVNLRHLLYSAALAPYVAHLPLRWRATLGALMTDEVFAVAHAHYRHAEPGATGPYHFFGSGIAMYANWQIWTIA GLLFGAAFPRLQSLGLDFAMAATFIAIVVPQLAAPPYLAAAVTAGAAAFFCRAWPYKLGLLAAVAAGVAIGVALTWLDGQ RARRRAEVA
Sequences:
>Translated_249_residues MSQFRPTHPPPGRLAEFAAGVRDTIPMMVGAAPFGMIFGTLVTTGPLAPWHGELMSLALFAGSAQFIALGLIAGGASYAV VLATTFIVNLRHLLYSAALAPYVAHLPLRWRATLGALMTDEVFAVAHAHYRHAEPGATGPYHFFGSGIAMYANWQIWTIA GLLFGAAFPRLQSLGLDFAMAATFIAIVVPQLAAPPYLAAAVTAGAAAFFCRAWPYKLGLLAAVAAGVAIGVALTWLDGQ RARRRAEVA >Mature_248_residues SQFRPTHPPPGRLAEFAAGVRDTIPMMVGAAPFGMIFGTLVTTGPLAPWHGELMSLALFAGSAQFIALGLIAGGASYAVV LATTFIVNLRHLLYSAALAPYVAHLPLRWRATLGALMTDEVFAVAHAHYRHAEPGATGPYHFFGSGIAMYANWQIWTIAG LLFGAAFPRLQSLGLDFAMAATFIAIVVPQLAAPPYLAAAVTAGAAAFFCRAWPYKLGLLAAVAAGVAIGVALTWLDGQR ARRRAEVA
Specific function: Unknown
COG id: COG1296
COG function: function code E; Predicted branched-chain amino acid permease (azaleucine resistance)
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789038, Length=160, Percent_Identity=28.125, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26232; Mature: 26101
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQFRPTHPPPGRLAEFAAGVRDTIPMMVGAAPFGMIFGTLVTTGPLAPWHGELMSLALF CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHH AGSAQFIALGLIAGGASYAVVLATTFIVNLRHLLYSAALAPYVAHLPLRWRATLGALMTD CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH EVFAVAHAHYRHAEPGATGPYHFFGSGIAMYANWQIWTIAGLLFGAAFPRLQSLGLDFAM HHHHHHHHHHHCCCCCCCCCCHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCHHHH AATFIAIVVPQLAAPPYLAAAVTAGAAAFFCRAWPYKLGLLAAVAAGVAIGVALTWLDGQ HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHEECCCH RARRRAEVA HHHHHCCCC >Mature Secondary Structure SQFRPTHPPPGRLAEFAAGVRDTIPMMVGAAPFGMIFGTLVTTGPLAPWHGELMSLALF CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHH AGSAQFIALGLIAGGASYAVVLATTFIVNLRHLLYSAALAPYVAHLPLRWRATLGALMTD CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH EVFAVAHAHYRHAEPGATGPYHFFGSGIAMYANWQIWTIAGLLFGAAFPRLQSLGLDFAM HHHHHHHHHHHCCCCCCCCCCHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCHHHH AATFIAIVVPQLAAPPYLAAAVTAGAAAFFCRAWPYKLGLLAAVAAGVAIGVALTWLDGQ HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHEECCCH RARRRAEVA HHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA