| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is yffB [H]
Identifier: 83719389
GI number: 83719389
Start: 2281137
End: 2281511
Strand: Reverse
Name: yffB [H]
Synonym: BTH_I2015
Alternate gene names: 83719389
Gene position: 2281511-2281137 (Counterclockwise)
Preceding gene: 161723132
Following gene: 83718475
Centisome position: 59.89
GC content: 69.33
Gene sequence:
>375_bases ATGGCGGGCGCGAAAGCCGCGGCCGGCACCGTCGTCTACGGAATCCCGAACTGCGACACCGTGAAGAAGGCCCGCACCTG GCTCGAATCGCACGGCGTCGAGTTCGCGTTCCACGATTTCAAGAAAGCCGGCGTGAGCGCGCCGCTCGTCAAGGGCTGGC TCGCGGACGTGACGCTCGCCGCGCTCGTCAACCGGCGCGGCACCACGTGGCGCGCGCTGACCGACGAGCAGAAGGCCGCA GCCGAATCCGAGGCGGGCGCGATCGCGCTGATGATCGACAAGCCCTCGGTGATCAAGCGGCCCGTCGTCGTCGTCGACGG CCGCGTGAAGGCGCTCGGCTTCTCGGCCGACGAGTACGCGGGGCTCTTCGCCTAA
Upstream 100 bases:
>100_bases AGGACGGCACGCACAGCCTCTACTGCGCGGTGATCGTGAAGAAAGTCGACGCGAAGACCCGCGCGAAGGTCGGCCTGAAC GAACTGCTGCGGGGCGACTG
Downstream 100 bases:
>100_bases CGCCGCGCGCACCGCCGCCCCAACCTGCTGCCGGCCGTCGCGCCGGCATTTTTTATCGAAAGTGGTCCGAACCATGTCCG CCACCCTTGCCCTCACCGAA
Product: ArsC family transcription regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 124; Mature: 123
Protein sequence:
>124_residues MAGAKAAAGTVVYGIPNCDTVKKARTWLESHGVEFAFHDFKKAGVSAPLVKGWLADVTLAALVNRRGTTWRALTDEQKAA AESEAGAIALMIDKPSVIKRPVVVVDGRVKALGFSADEYAGLFA
Sequences:
>Translated_124_residues MAGAKAAAGTVVYGIPNCDTVKKARTWLESHGVEFAFHDFKKAGVSAPLVKGWLADVTLAALVNRRGTTWRALTDEQKAA AESEAGAIALMIDKPSVIKRPVVVVDGRVKALGFSADEYAGLFA >Mature_123_residues AGAKAAAGTVVYGIPNCDTVKKARTWLESHGVEFAFHDFKKAGVSAPLVKGWLADVTLAALVNRRGTTWRALTDEQKAAA ESEAGAIALMIDKPSVIKRPVVVVDGRVKALGFSADEYAGLFA
Specific function: Unknown
COG id: COG1393
COG function: function code P; Arsenate reductase and related proteins, glutaredoxin family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ArsC family [H]
Homologues:
Organism=Escherichia coli, GI1788815, Length=113, Percent_Identity=41.5929203539823, Blast_Score=109, Evalue=5e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006660 - InterPro: IPR012336 - InterPro: IPR012335 - InterPro: IPR006504 [H]
Pfam domain/function: PF03960 ArsC [H]
EC number: NA
Molecular weight: Translated: 13087; Mature: 12956
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGAKAAAGTVVYGIPNCDTVKKARTWLESHGVEFAFHDFKKAGVSAPLVKGWLADVTLA CCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEHHHHHCCCCCHHHHHHHHHHHHH ALVNRRGTTWRALTDEQKAAAESEAGAIALMIDKPSVIKRPVVVVDGRVKALGFSADEYA HHHHCCCCEEEEECCHHHHHCCCCCCEEEEEECCCHHHHCCEEEECCCEEEECCCCHHCC GLFA CCCC >Mature Secondary Structure AGAKAAAGTVVYGIPNCDTVKKARTWLESHGVEFAFHDFKKAGVSAPLVKGWLADVTLA CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEHHHHHCCCCCHHHHHHHHHHHHH ALVNRRGTTWRALTDEQKAAAESEAGAIALMIDKPSVIKRPVVVVDGRVKALGFSADEYA HHHHCCCCEEEEECCHHHHHCCCCCCEEEEEECCCHHHHCCEEEECCCEEEECCCCHHCC GLFA CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1644752; 9205837; 9278503; 10493123 [H]