Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
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Accession | NC_007651 |
Length | 3,809,201 |
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The map label for this gene is 83718691
Identifier: 83718691
GI number: 83718691
Start: 1559988
End: 1560440
Strand: Direct
Name: 83718691
Synonym: BTH_I1384
Alternate gene names: NA
Gene position: 1559988-1560440 (Clockwise)
Preceding gene: 83720766
Following gene: 83721537
Centisome position: 40.95
GC content: 67.33
Gene sequence:
>453_bases ATGTCGTGTATCGAACGCAGCTCGCGCTTGCGGGGCTTCACATTGATCGAAGTGGTCGTCGCGCTCGCGATCGTGGCCGT GCTCGCGGCGTTTGCCGTGCCGTCGTATCGCAGTCATGTCGAACGAGGGAACCGGCTGACCGCGATTGCCGCGCTGTATC GCGCCGCTCAATACGTGGACGCGTTCGGCGATGCGCCGCCCGCCGCATTACCGGACGGGATGAACAGGGCGCCCGATTCC GGTCGGGTTGTCTACGTGTTGCGGATCACGCTCGACGACGCGCGCGGCGGATATGCACTGGAGGCGAGTCCTGCCGCCGA CGGCGCGATGCAGGGCGATAGATGCGGCGTCTATGTGCTGCACGCGGACGGCACGCGGGGGAATCGCGCGGCCGGAGGCG CCGCCTTCGATGAAGGCGTGCTGGGAGCCGATGTGTGCTGGCGAGCCAGCTAG
Upstream 100 bases:
>100_bases TCGAGTGGCTGCAATTGCAGATTGCGATCGAGAGCGGACGCGTCGAACGCCGGTGGCGCCGGGTCGTGGGCCGGCCGGCA TAGAAGGCGGAGGAACGGCG
Downstream 100 bases:
>100_bases ATGTGGCGCGTCGAGAACCGGTCGCTCGACGCCGGAAACCGGACGGTCGGCGTGATCGGGTCCGCAGTCCGGCCGACAAG CGTCATGGGCGTGTGCGTTG
Product: type IV pilus biogenesis protein
Products: NA
Alternate protein names: Type IV Pilus Biogenesis Protein; Fimbrial Protein
Number of amino acids: Translated: 150; Mature: 149
Protein sequence:
>150_residues MSCIERSSRLRGFTLIEVVVALAIVAVLAAFAVPSYRSHVERGNRLTAIAALYRAAQYVDAFGDAPPAALPDGMNRAPDS GRVVYVLRITLDDARGGYALEASPAADGAMQGDRCGVYVLHADGTRGNRAAGGAAFDEGVLGADVCWRAS
Sequences:
>Translated_150_residues MSCIERSSRLRGFTLIEVVVALAIVAVLAAFAVPSYRSHVERGNRLTAIAALYRAAQYVDAFGDAPPAALPDGMNRAPDS GRVVYVLRITLDDARGGYALEASPAADGAMQGDRCGVYVLHADGTRGNRAAGGAAFDEGVLGADVCWRAS >Mature_149_residues SCIERSSRLRGFTLIEVVVALAIVAVLAAFAVPSYRSHVERGNRLTAIAALYRAAQYVDAFGDAPPAALPDGMNRAPDSG RVVYVLRITLDDARGGYALEASPAADGAMQGDRCGVYVLHADGTRGNRAAGGAAFDEGVLGADVCWRAS
Specific function: Unknown
COG id: COG4968
COG function: function code NU; Tfp pilus assembly protein PilE
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15671; Mature: 15540
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSCIERSSRLRGFTLIEVVVALAIVAVLAAFAVPSYRSHVERGNRLTAIAALYRAAQYVD CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHH AFGDAPPAALPDGMNRAPDSGRVVYVLRITLDDARGGYALEASPAADGAMQGDRCGVYVL HHCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCEEEECCCCCCCCCCCCCCCEEEE HADGTRGNRAAGGAAFDEGVLGADVCWRAS ECCCCCCCCCCCCCCCCCCCCCCCEEECCC >Mature Secondary Structure SCIERSSRLRGFTLIEVVVALAIVAVLAAFAVPSYRSHVERGNRLTAIAALYRAAQYVD CCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHH AFGDAPPAALPDGMNRAPDSGRVVYVLRITLDDARGGYALEASPAADGAMQGDRCGVYVL HHCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCEEEECCCCCCCCCCCCCCCEEEE HADGTRGNRAAGGAAFDEGVLGADVCWRAS ECCCCCCCCCCCCCCCCCCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA