| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is 83718658
Identifier: 83718658
GI number: 83718658
Start: 2169329
End: 2170039
Strand: Reverse
Name: 83718658
Synonym: BTH_I1924
Alternate gene names: NA
Gene position: 2170039-2169329 (Counterclockwise)
Preceding gene: 83720644
Following gene: 83720233
Centisome position: 56.97
GC content: 54.99
Gene sequence:
>711_bases ATGGATATCAGCCTCCAATTCAAAGATGCATCATTGACCCCGACGAGCTTCGAGGAAATTCTGTCACGCATTCATGTCGT GACATCCGCACTGACCACCCTCAACCCGAAGTTCAATACGTGGTTTGCGCAGGGTAGTAGCCGAGATGAAGCCTTGCTGT ATCCGGTGTTCGAAGAGGGACATCCGACGACTGCGATCCTCGCTGTCTTGAAGCAAAAGTTCTCGAAAAATCCGCCCACC TCGTACGTCGCGCTGTGGGATGGCGACGAGAACGAAGACCAAGGCGCGACCATCGCGTGCCACGTCAATTCCGCCGGTCT GCCCAACACATTCGAACTCTCACTGTTCGATGCGCCTATCCTTCGCGATCTGAATGCCGTGGAAAAAATCGTGCGCGCAA CGATCACAGCCTTCGGTCCCGCATACGTCTGCGTGGCACCACGAAGCTACGTTACGAAACAGGTTTTCGATGACAAGCCG GGGGTCGGTTGGATGCTTTACTTGCCCCGCGTCATCACACAGCAGCAGGTTCCCGAAGCACGTGCATTGATCCCCGTAAC GACCGACGGAAAGAAGCAACAAGGCACGATCATTGTCAGCACTACCGATGCCCCTTTTTCCATGCAGGTTCCCGAACACG TCGAGGTCGCGAACCGCATCGAGATTCGGCTCGTCGATCAAGATCTGCTGCCCGCATTCTCCGACATTTAA
Upstream 100 bases:
>100_bases TGAAGTGGTATTTCGAAGAAGCCGACGCACGCGAATACATGCTCCCCGCCCTTATCCGCAACAAGGTGCAATCGGTCGTG CAACCGTAACTCGAGTGAAT
Downstream 100 bases:
>100_bases TCGCTGGTTGGCGCGACTCGCATCGCGCCAACCCATTCCGTCAGAAAAGTCCCGCCGGCTGCGCCGCATCGTCCCAACTG AAGATGATCAGTTCGCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 236; Mature: 236
Protein sequence:
>236_residues MDISLQFKDASLTPTSFEEILSRIHVVTSALTTLNPKFNTWFAQGSSRDEALLYPVFEEGHPTTAILAVLKQKFSKNPPT SYVALWDGDENEDQGATIACHVNSAGLPNTFELSLFDAPILRDLNAVEKIVRATITAFGPAYVCVAPRSYVTKQVFDDKP GVGWMLYLPRVITQQQVPEARALIPVTTDGKKQQGTIIVSTTDAPFSMQVPEHVEVANRIEIRLVDQDLLPAFSDI
Sequences:
>Translated_236_residues MDISLQFKDASLTPTSFEEILSRIHVVTSALTTLNPKFNTWFAQGSSRDEALLYPVFEEGHPTTAILAVLKQKFSKNPPT SYVALWDGDENEDQGATIACHVNSAGLPNTFELSLFDAPILRDLNAVEKIVRATITAFGPAYVCVAPRSYVTKQVFDDKP GVGWMLYLPRVITQQQVPEARALIPVTTDGKKQQGTIIVSTTDAPFSMQVPEHVEVANRIEIRLVDQDLLPAFSDI >Mature_236_residues MDISLQFKDASLTPTSFEEILSRIHVVTSALTTLNPKFNTWFAQGSSRDEALLYPVFEEGHPTTAILAVLKQKFSKNPPT SYVALWDGDENEDQGATIACHVNSAGLPNTFELSLFDAPILRDLNAVEKIVRATITAFGPAYVCVAPRSYVTKQVFDDKP GVGWMLYLPRVITQQQVPEARALIPVTTDGKKQQGTIIVSTTDAPFSMQVPEHVEVANRIEIRLVDQDLLPAFSDI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26048; Mature: 26048
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDISLQFKDASLTPTSFEEILSRIHVVTSALTTLNPKFNTWFAQGSSRDEALLYPVFEEG CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCEEEEEEECCC HPTTAILAVLKQKFSKNPPTSYVALWDGDENEDQGATIACHVNSAGLPNTFELSLFDAPI CCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCEEEEEEECCHH LRDLNAVEKIVRATITAFGPAYVCVAPRSYVTKQVFDDKPGVGWMLYLPRVITQQQVPEA HHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC RALIPVTTDGKKQQGTIIVSTTDAPFSMQVPEHVEVANRIEIRLVDQDLLPAFSDI CEEEEEECCCCCCCCEEEEEECCCCEEECCCHHHHHCCEEEEEEECHHHHHHHHCC >Mature Secondary Structure MDISLQFKDASLTPTSFEEILSRIHVVTSALTTLNPKFNTWFAQGSSRDEALLYPVFEEG CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCEEEEEEECCC HPTTAILAVLKQKFSKNPPTSYVALWDGDENEDQGATIACHVNSAGLPNTFELSLFDAPI CCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCEEEEEEECCHH LRDLNAVEKIVRATITAFGPAYVCVAPRSYVTKQVFDDKPGVGWMLYLPRVITQQQVPEA HHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC RALIPVTTDGKKQQGTIIVSTTDAPFSMQVPEHVEVANRIEIRLVDQDLLPAFSDI CEEEEEECCCCCCCCEEEEEECCCCEEECCCHHHHHCCEEEEEEECHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA