Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
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Accession | NC_007651 |
Length | 3,809,201 |
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The map label for this gene is 83718560
Identifier: 83718560
GI number: 83718560
Start: 2504758
End: 2505618
Strand: Reverse
Name: 83718560
Synonym: BTH_I2228
Alternate gene names: NA
Gene position: 2505618-2504758 (Counterclockwise)
Preceding gene: 83720033
Following gene: 83721362
Centisome position: 65.78
GC content: 71.43
Gene sequence:
>861_bases ATGCGACTCATCAGTTGGAACATCCAATGGGGACGGGACGCGAACGGCACGGTCGACCTCGCGCGCACTATCGACGCCGC GCGCGGCCTCGGCGATTTCGACGTGCTATGCATGCAGGAAGTCACGCGCGGCTTTCACGCGCTGCCGGGCGGGCCGTCCG GCGATCAATATGCGGAACTGGCCGCGCTGCTGCCGGGTTACGCGGTGTTCGACGCGATCGGCGTCGATCTGCCGCCGCTC GGGCCGGGCGCGCCGCGCCGGCAATTCGGCAACGCGCTCGCGACGCGGCTGCCCGTCGAGCGCGCGATGCGTCACGCGCT GCCGTGGCCCGCGAGCGCCGCCGCACCGTCGATGCCGCGCTGCGCGCTCGAGGTCACGCTGCGCGCGCCGTTCGGGCCGC TGCGCGTCATCGTCACGCACCTCGAGTACTACTCGGCGCAGCAGCGGCTCGCGCAGGTCGATGCGCTGCGGCGCCTGCAT CGCGAGGCGGCCGCGCATGCGCGCGCCAGCGCGCCGCCGGAAACGCCGACGGGCCCGTTCGCGCCGTCGGCGCGCGCGGC CGATGCCATCGTCTGCGGCGACTTCAACAGCGCGTACCGCAGCGAAGCGTACCGGCGCTTTCTCGCGCCGTTCCCGGACG CGCCGCGCTTCGTCGACGCGTGGCTCGCGCGCCATCCGGGCAAGACGCCGCCGATGACGGCGGGCGTCTACGACACCGGG CAATGGAGTGAAGGACCGATGACGTGCGATTTCGCATTCGTCACCGACACGCTCGCCCACCGCATATCACGCTGCGAGAT CGACGGCGCGACACGCGCATCCGATCATCAGCCGATCGTGCTGGAGTTGAGCGATACGTAG
Upstream 100 bases:
>100_bases GGAGAGAGGGACGGCTTCTGACACCAGCTTTTCCTGACGAACGATTGTGGGGAAAGGCGAGATTGTAGACGAACGGCCGC CATGCAACGGAGATTCGACG
Downstream 100 bases:
>100_bases TCAAAGCGACGCGCAAGCAGATCGGCCGACGGCGATCGACGCGCGGCCGGCCGTCGCCGGAGGGCGGCAAGCGATTCGAG ACGAACGGGAAGCGCGACGT
Product: endonuclease/exonuclease/phosphatase family protein
Products: NA
Alternate protein names: Metal-Dependent Hydrolase; Endonuclease/Exonuclease/Phosphatase Family Protein; Endonuclease / Exonuclease / Phosphatase; Metal-Dependent Exonuclease Protein
Number of amino acids: Translated: 286; Mature: 286
Protein sequence:
>286_residues MRLISWNIQWGRDANGTVDLARTIDAARGLGDFDVLCMQEVTRGFHALPGGPSGDQYAELAALLPGYAVFDAIGVDLPPL GPGAPRRQFGNALATRLPVERAMRHALPWPASAAAPSMPRCALEVTLRAPFGPLRVIVTHLEYYSAQQRLAQVDALRRLH REAAAHARASAPPETPTGPFAPSARAADAIVCGDFNSAYRSEAYRRFLAPFPDAPRFVDAWLARHPGKTPPMTAGVYDTG QWSEGPMTCDFAFVTDTLAHRISRCEIDGATRASDHQPIVLELSDT
Sequences:
>Translated_286_residues MRLISWNIQWGRDANGTVDLARTIDAARGLGDFDVLCMQEVTRGFHALPGGPSGDQYAELAALLPGYAVFDAIGVDLPPL GPGAPRRQFGNALATRLPVERAMRHALPWPASAAAPSMPRCALEVTLRAPFGPLRVIVTHLEYYSAQQRLAQVDALRRLH REAAAHARASAPPETPTGPFAPSARAADAIVCGDFNSAYRSEAYRRFLAPFPDAPRFVDAWLARHPGKTPPMTAGVYDTG QWSEGPMTCDFAFVTDTLAHRISRCEIDGATRASDHQPIVLELSDT >Mature_286_residues MRLISWNIQWGRDANGTVDLARTIDAARGLGDFDVLCMQEVTRGFHALPGGPSGDQYAELAALLPGYAVFDAIGVDLPPL GPGAPRRQFGNALATRLPVERAMRHALPWPASAAAPSMPRCALEVTLRAPFGPLRVIVTHLEYYSAQQRLAQVDALRRLH REAAAHARASAPPETPTGPFAPSARAADAIVCGDFNSAYRSEAYRRFLAPFPDAPRFVDAWLARHPGKTPPMTAGVYDTG QWSEGPMTCDFAFVTDTLAHRISRCEIDGATRASDHQPIVLELSDT
Specific function: Unknown
COG id: COG3568
COG function: function code R; Metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30993; Mature: 30993
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLISWNIQWGRDANGTVDLARTIDAARGLGDFDVLCMQEVTRGFHALPGGPSGDQYAEL CEEEEEECEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHH AALLPGYAVFDAIGVDLPPLGPGAPRRQFGNALATRLPVERAMRHALPWPASAAAPSMPR HHHCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCC CALEVTLRAPFGPLRVIVTHLEYYSAQQRLAQVDALRRLHREAAAHARASAPPETPTGPF EEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC APSARAADAIVCGDFNSAYRSEAYRRFLAPFPDAPRFVDAWLARHPGKTPPMTAGVYDTG CCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC QWSEGPMTCDFAFVTDTLAHRISRCEIDGATRASDHQPIVLELSDT CCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCC >Mature Secondary Structure MRLISWNIQWGRDANGTVDLARTIDAARGLGDFDVLCMQEVTRGFHALPGGPSGDQYAEL CEEEEEECEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHH AALLPGYAVFDAIGVDLPPLGPGAPRRQFGNALATRLPVERAMRHALPWPASAAAPSMPR HHHCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCC CALEVTLRAPFGPLRVIVTHLEYYSAQQRLAQVDALRRLHREAAAHARASAPPETPTGPF EEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC APSARAADAIVCGDFNSAYRSEAYRRFLAPFPDAPRFVDAWLARHPGKTPPMTAGVYDTG CCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC QWSEGPMTCDFAFVTDTLAHRISRCEIDGATRASDHQPIVLELSDT CCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA