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The map label for this gene is oxyR [H]

Identifier: 83718556

GI number: 83718556

Start: 1432632

End: 1433591

Strand: Direct

Name: oxyR [H]

Synonym: BTH_I1281

Alternate gene names: 83718556

Gene position: 1432632-1433591 (Clockwise)

Preceding gene: 83719281

Following gene: 83718551

Centisome position: 37.61

GC content: 65.1

Gene sequence:

>960_bases
ATGACGCTTACTGAACTGAAGTACATCGTCGCGGTCGCGCGCGAGCGCCATTTCGGCCGGGCGGCCGAAGCCTGCTTCGT
CAGCCAGCCGACGCTGTCGGTCGCGATCAAGAAGCTGGAAGACGAGTTGAACGTGCAGATCTTCGAGCGCGGCGCGAGCG
AGGTGAGCGTGACGCCGATCGGCGACCAGATCGTCACGCAAGCGCAGCGCGTGCTCGAGCAGACGTTCGCGATCAAGGAG
ATCGCGAAGCAGGGCAAGGATCCGCTCATCGGGCCGTTTCGGCTCGGCGTGATCTATACGATCGGGCCCTATCTGCTGCC
GACGCTCGTCAAGCAGATGATTCGCCGCGTGCCGCAAATGCCGTTGATGCTGCAGGAGAACTACACGCTGAAGCTGCTCG
AGCTGCTCAAACAGGGCGAGATCGACGCGGCGATCATGGCATTGCCGTTTCCCGAAACCGGCCTGATGGTGCGGCCGCTG
TACGACGAGCCGTTCGTCGTCGCGCTGCCCACCGGGCATCCATGGGGGACGCGCCGCAAGATCGACGCGGCCGACCTGAA
GCAGGAGACGATGCTGCTGCTCGGCAACGGCCATTGCTTCCGCGACCACGTGCTCGGCGTATGTCCGGAGCTGATGCATT
TTTCGCAGACGGCGGACGGCATTCAGAAGACGTTCGAAGGCTCGTCGCTCGAGACGATCCGCCACATGGTCGCGAGCGGC
GTCGGGATCACGGTGCTGCCGCGGATGTCGGTCGCCGAGGTGGGGCCGCATGCAAGCGGACCGGACGCGGACCTGCTGTC
CTACGTGCCGTTCGAGGACCCGGTGCCGGATCGGCGCGTCGTGCTCGTGTGGCGCAAGAGCTTCACGCGGATGCCGGCGA
TCGACGCGATCAGCGAGGCGATCGCCGCATGCGAGTTGCCCGGCGTGGCGAAGCTCGACATCCCGGCTACGGTGAATTGA

Upstream 100 bases:

>100_bases
GCGCGCCGCGACAGCGGATCTTTTCGGCGAAGGTTGGCGAATCGGCCCAAACCAGTGTATAAATTTAATCTATCGTCATT
AAATGATTGATTAACTTGCA

Downstream 100 bases:

>100_bases
GCGCGCCGCGCATCCGCCCGGGCGGGGCCTTGCGGCCCCGTTTATTTTTGCCTATCGGATATATAAAATTTATCAAATTA
CATATATCGATAGCTATATA

Product: oxidative stress regulatory protein OxyR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 318

Protein sequence:

>319_residues
MTLTELKYIVAVARERHFGRAAEACFVSQPTLSVAIKKLEDELNVQIFERGASEVSVTPIGDQIVTQAQRVLEQTFAIKE
IAKQGKDPLIGPFRLGVIYTIGPYLLPTLVKQMIRRVPQMPLMLQENYTLKLLELLKQGEIDAAIMALPFPETGLMVRPL
YDEPFVVALPTGHPWGTRRKIDAADLKQETMLLLGNGHCFRDHVLGVCPELMHFSQTADGIQKTFEGSSLETIRHMVASG
VGITVLPRMSVAEVGPHASGPDADLLSYVPFEDPVPDRRVVLVWRKSFTRMPAIDAISEAIAACELPGVAKLDIPATVN

Sequences:

>Translated_319_residues
MTLTELKYIVAVARERHFGRAAEACFVSQPTLSVAIKKLEDELNVQIFERGASEVSVTPIGDQIVTQAQRVLEQTFAIKE
IAKQGKDPLIGPFRLGVIYTIGPYLLPTLVKQMIRRVPQMPLMLQENYTLKLLELLKQGEIDAAIMALPFPETGLMVRPL
YDEPFVVALPTGHPWGTRRKIDAADLKQETMLLLGNGHCFRDHVLGVCPELMHFSQTADGIQKTFEGSSLETIRHMVASG
VGITVLPRMSVAEVGPHASGPDADLLSYVPFEDPVPDRRVVLVWRKSFTRMPAIDAISEAIAACELPGVAKLDIPATVN
>Mature_318_residues
TLTELKYIVAVARERHFGRAAEACFVSQPTLSVAIKKLEDELNVQIFERGASEVSVTPIGDQIVTQAQRVLEQTFAIKEI
AKQGKDPLIGPFRLGVIYTIGPYLLPTLVKQMIRRVPQMPLMLQENYTLKLLELLKQGEIDAAIMALPFPETGLMVRPLY
DEPFVVALPTGHPWGTRRKIDAADLKQETMLLLGNGHCFRDHVLGVCPELMHFSQTADGIQKTFEGSSLETIRHMVASGV
GITVLPRMSVAEVGPHASGPDADLLSYVPFEDPVPDRRVVLVWRKSFTRMPAIDAISEAIAACELPGVAKLDIPATVN

Specific function: Required for the induction of a regulon of hydrogen peroxide inducible genes such as catalase and glutathione- reductase [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790399, Length=303, Percent_Identity=39.9339933993399, Blast_Score=214, Evalue=5e-57,
Organism=Escherichia coli, GI157672245, Length=311, Percent_Identity=26.3665594855305, Blast_Score=99, Evalue=4e-22,
Organism=Escherichia coli, GI1787530, Length=261, Percent_Identity=27.5862068965517, Blast_Score=99, Evalue=4e-22,
Organism=Escherichia coli, GI1788748, Length=311, Percent_Identity=26.6881028938907, Blast_Score=92, Evalue=5e-20,
Organism=Escherichia coli, GI2367136, Length=242, Percent_Identity=28.5123966942149, Blast_Score=91, Evalue=7e-20,
Organism=Escherichia coli, GI145693105, Length=300, Percent_Identity=26.3333333333333, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI1788887, Length=292, Percent_Identity=26.7123287671233, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1787879, Length=303, Percent_Identity=26.0726072607261, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1787601, Length=189, Percent_Identity=26.984126984127, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI87081904, Length=176, Percent_Identity=32.3863636363636, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI1787806, Length=296, Percent_Identity=23.9864864864865, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1788481, Length=252, Percent_Identity=26.1904761904762, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI1790262, Length=259, Percent_Identity=25.8687258687259, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1786401, Length=247, Percent_Identity=25.5060728744939, Blast_Score=64, Evalue=9e-12,
Organism=Escherichia coli, GI1788296, Length=177, Percent_Identity=26.5536723163842, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 35159; Mature: 35027

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLTELKYIVAVARERHFGRAAEACFVSQPTLSVAIKKLEDELNVQIFERGASEVSVTPI
CCHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHCHHHEECCCCEEEEECC
GDQIVTQAQRVLEQTFAIKEIAKQGKDPLIGPFRLGVIYTIGPYLLPTLVKQMIRRVPQM
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PLMLQENYTLKLLELLKQGEIDAAIMALPFPETGLMVRPLYDEPFVVALPTGHPWGTRRK
CEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCCCEEEECCCCCEEEEECCCCCCCCCCC
IDAADLKQETMLLLGNGHCFRDHVLGVCPELMHFSQTADGIQKTFEGSSLETIRHMVASG
CCHHHHCCCEEEEEECCCCHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
VGITVLPRMSVAEVGPHASGPDADLLSYVPFEDPVPDRRVVLVWRKSFTRMPAIDAISEA
CCEEEECCCHHHHCCCCCCCCCHHHHCCCCCCCCCCCCEEEEEEEHHCCCCCHHHHHHHH
IAACELPGVAKLDIPATVN
HHHHCCCCCEEECCCCCCC
>Mature Secondary Structure 
TLTELKYIVAVARERHFGRAAEACFVSQPTLSVAIKKLEDELNVQIFERGASEVSVTPI
CHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHCHHHEECCCCEEEEECC
GDQIVTQAQRVLEQTFAIKEIAKQGKDPLIGPFRLGVIYTIGPYLLPTLVKQMIRRVPQM
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PLMLQENYTLKLLELLKQGEIDAAIMALPFPETGLMVRPLYDEPFVVALPTGHPWGTRRK
CEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCCCEEEECCCCCEEEEECCCCCCCCCCC
IDAADLKQETMLLLGNGHCFRDHVLGVCPELMHFSQTADGIQKTFEGSSLETIRHMVASG
CCHHHHCCCEEEEEECCCCHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
VGITVLPRMSVAEVGPHASGPDADLLSYVPFEDPVPDRRVVLVWRKSFTRMPAIDAISEA
CCEEEECCCHHHHCCCCCCCCCHHHHCCCCCCCCCCCCEEEEEEEHHCCCCCHHHHHHHH
IAACELPGVAKLDIPATVN
HHHHCCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA