| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is sugE [H]
Identifier: 83718491
GI number: 83718491
Start: 1166479
End: 1166799
Strand: Direct
Name: sugE [H]
Synonym: BTH_I1027
Alternate gene names: 83718491
Gene position: 1166479-1166799 (Clockwise)
Preceding gene: 83721241
Following gene: 83720547
Centisome position: 30.62
GC content: 67.29
Gene sequence:
>321_bases ATGCCTTGGCTGTGGCTTCTCATCGCCGGTCTGCTCGAAATCGCGTGGGCGGCCGGTCTCAAATCGTCCGAGGGCTTTAC GCGCCTCGGTCCGTCCATCTTCACGATCGTCACCGCGCTCGGCAGCTTCGGCTTGCTCGCCGTCGCGATGCGCGAGCTGC CGCTCGGCACCGCGTACGCGGTCTGGACGGGCATCGGCGCCGTCGGCGCGTTCATCTTCGGGATCGTGATGCTCGGCGAA GCGGCGACGTTCGCCCGTATCGCGAGCGCATCGCTGATCGTCGTCGGGCTCATCGGCCTGAAACTGTCGTCGGCCGGCTG A
Upstream 100 bases:
>100_bases AGGCTGTAAGCCTGTTGTTATACTTCCGCTGCCCGGGGACGACCCCGGGCCGTCGATGTCCAACGGGGACGACCCCATTT GATTCACGGAGAGTCTCCGC
Downstream 100 bases:
>100_bases GCGCAGGGTTTGTCGCTGCGGCGGTGGCGTGCGTCGCGCGTCTATAATGAAGCGGAATCCATCTGACAACGTCCCGCCGC CGCGCGCGAACCGGCGGGGC
Product: sugE protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 106; Mature: 105
Protein sequence:
>106_residues MPWLWLLIAGLLEIAWAAGLKSSEGFTRLGPSIFTIVTALGSFGLLAVAMRELPLGTAYAVWTGIGAVGAFIFGIVMLGE AATFARIASASLIVVGLIGLKLSSAG
Sequences:
>Translated_106_residues MPWLWLLIAGLLEIAWAAGLKSSEGFTRLGPSIFTIVTALGSFGLLAVAMRELPLGTAYAVWTGIGAVGAFIFGIVMLGE AATFARIASASLIVVGLIGLKLSSAG >Mature_105_residues PWLWLLIAGLLEIAWAAGLKSSEGFTRLGPSIFTIVTALGSFGLLAVAMRELPLGTAYAVWTGIGAVGAFIFGIVMLGEA ATFARIASASLIVVGLIGLKLSSAG
Specific function: Quaternary ammonium compound efflux pump. Confers resistance to cetylpyridinium, cetyldimethylethyl ammonium and cetrimide cations [H]
COG id: COG2076
COG function: function code P; Membrane transporters of cations and cationic drugs
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the small multidrug resistance (SMR) protein family. SugE (TC 2.A.7.1.4) subfamily [H]
Homologues:
Organism=Escherichia coli, GI87082378, Length=104, Percent_Identity=62.5, Blast_Score=122, Evalue=4e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000390 [H]
Pfam domain/function: PF00893 Multi_Drug_Res [H]
EC number: NA
Molecular weight: Translated: 10852; Mature: 10721
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPWLWLLIAGLLEIAWAAGLKSSEGFTRLGPSIFTIVTALGSFGLLAVAMRELPLGTAYA CCHHHHHHHHHHHHHHHHCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH VWTGIGAVGAFIFGIVMLGEAATFARIASASLIVVGLIGLKLSSAG HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PWLWLLIAGLLEIAWAAGLKSSEGFTRLGPSIFTIVTALGSFGLLAVAMRELPLGTAYA CHHHHHHHHHHHHHHHHCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH VWTGIGAVGAFIFGIVMLGEAATFARIASASLIVVGLIGLKLSSAG HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]