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The map label for this gene is ruvC [H]

Identifier: 161723182

GI number: 161723182

Start: 1394857

End: 1395399

Strand: Reverse

Name: ruvC [H]

Synonym: BTH_I1249

Alternate gene names: 161723182

Gene position: 1395399-1394857 (Counterclockwise)

Preceding gene: 83720913

Following gene: 83719212

Centisome position: 36.63

GC content: 70.17

Gene sequence:

>543_bases
ATGCGAATCCTCGGCATCGACCCCGGCTTGCGCGTCACGGGCTTCGGCGTGATCGACGTCAGCGGCCACCGGCTCGCGTA
CGTCGCAAGCGGCGTGATCAAAACGCCCACCGCCGACCTGCCCACGCGGCTCGGCACGATCTATGACGGCGTCTCGACGC
TGATCCGCGAGCACACGCCCGACCAGGCGGCGATCGAGAAAGTGTTCGTCAACGTCAACCCGCAATCGACGCTGCTCCTC
GGCCAGGCGCGCGGCGCCGCGATCTGCGGGCTCGTATCGGGCGGCCTGCCCGTCGCCGAGTACACGGCGCTGCAACTCAA
GCAGGCGGTGGTGGGCTACGGACGCGCGACGAAAGAACAGATGCAGGAGATGGTCGCGCGGCTGCTGAGCCTGTCCGGGT
TGCCCGGCACCGACGCGGCCGACGCGCTCGGAATGGCGATCTGCCACGCGCACGGCGGCAACACGCTGAACACGCTCGGC
GGCATCGCACCCGCGCTCGCGAAGAAGGGGCTGCGCGTGCGGCGCGGACGGCTCGTCGGGTGA

Upstream 100 bases:

>100_bases
CGTCCACCAATTGCCATCGCGATTGCGTCGCCCCCCCGCCTTCGCCGGAATTCGGCGTCATTCGTGTAGTATCGGTCGCA
GTCAGCTTTTCCGTTTCTCC

Downstream 100 bases:

>100_bases
CGCGCGTTCGTGCGGCGAGCGGCGGCGCGCACCGCCGCCCGCGCGCCGCGGTGCGCTACACTCGCGCTTTCCGTTCCGTC
CCGCACTCGCCATGATCGGT

Product: Holliday junction resolvase

Products: NA

Alternate protein names: Holliday junction nuclease ruvC; Holliday junction resolvase ruvC [H]

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MRILGIDPGLRVTGFGVIDVSGHRLAYVASGVIKTPTADLPTRLGTIYDGVSTLIREHTPDQAAIEKVFVNVNPQSTLLL
GQARGAAICGLVSGGLPVAEYTALQLKQAVVGYGRATKEQMQEMVARLLSLSGLPGTDAADALGMAICHAHGGNTLNTLG
GIAPALAKKGLRVRRGRLVG

Sequences:

>Translated_180_residues
MRILGIDPGLRVTGFGVIDVSGHRLAYVASGVIKTPTADLPTRLGTIYDGVSTLIREHTPDQAAIEKVFVNVNPQSTLLL
GQARGAAICGLVSGGLPVAEYTALQLKQAVVGYGRATKEQMQEMVARLLSLSGLPGTDAADALGMAICHAHGGNTLNTLG
GIAPALAKKGLRVRRGRLVG
>Mature_180_residues
MRILGIDPGLRVTGFGVIDVSGHRLAYVASGVIKTPTADLPTRLGTIYDGVSTLIREHTPDQAAIEKVFVNVNPQSTLLL
GQARGAAICGLVSGGLPVAEYTALQLKQAVVGYGRATKEQMQEMVARLLSLSGLPGTDAADALGMAICHAHGGNTLNTLG
GIAPALAKKGLRVRRGRLVG

Specific function: Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leav

COG id: COG0817

COG function: function code L; Holliday junction resolvasome, endonuclease subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ruvC family [H]

Homologues:

Organism=Escherichia coli, GI1788170, Length=176, Percent_Identity=50.5681818181818, Blast_Score=139, Evalue=7e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012337
- InterPro:   IPR020563
- InterPro:   IPR002176 [H]

Pfam domain/function: PF02075 RuvC [H]

EC number: =3.1.22.4 [H]

Molecular weight: Translated: 18633; Mature: 18633

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILGIDPGLRVTGFGVIDVSGHRLAYVASGVIKTPTADLPTRLGTIYDGVSTLIREHTP
CEEECCCCCCEEEEEEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
DQAAIEKVFVNVNPQSTLLLGQARGAAICGLVSGGLPVAEYTALQLKQAVVGYGRATKEQ
CHHHHHHHEEECCCCCEEEEECCCCCEEEEHHCCCCCHHHHHHHHHHHHHHHCCCCCHHH
MQEMVARLLSLSGLPGTDAADALGMAICHAHGGNTLNTLGGIAPALAKKGLRVRRGRLVG
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHCCCCCC
>Mature Secondary Structure
MRILGIDPGLRVTGFGVIDVSGHRLAYVASGVIKTPTADLPTRLGTIYDGVSTLIREHTP
CEEECCCCCCEEEEEEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
DQAAIEKVFVNVNPQSTLLLGQARGAAICGLVSGGLPVAEYTALQLKQAVVGYGRATKEQ
CHHHHHHHEEECCCCCEEEEECCCCCEEEEHHCCCCCHHHHHHHHHHHHHHHCCCCCHHH
MQEMVARLLSLSGLPGTDAADALGMAICHAHGGNTLNTLGGIAPALAKKGLRVRRGRLVG
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA