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The map label for this gene is tapC [H]

Identifier: 83590395

GI number: 83590395

Start: 1594323

End: 1595531

Strand: Reverse

Name: tapC [H]

Synonym: Moth_1552

Alternate gene names: 83590395

Gene position: 1595531-1594323 (Counterclockwise)

Preceding gene: 83590396

Following gene: 83590394

Centisome position: 60.69

GC content: 62.61

Gene sequence:

>1209_bases
ATGAACTTTGCCTACCGGGGAAGGGATGCCAGGGGGAATGCAGTTAGCGGGAATCTAGAAGCGGAAAACCAGGAAGTGGC
CATCCAGGAACTGCGGCGGCAGGGGATCTTTATTACTTCCTTACGGCCGGTAGATGTCAAGCCTGCCCTGGACTGGCGGG
GCCTCTTCCGCCGGCCGGTATCCCGCCGCGACCTGGCCCTCTTCTGTCGTCAACTGGCGACTATGCTGGGGGCCGGCCTG
CCGATTATGTCCGCCCTGCGTGTTTTACAGCGGCAGGTAGAAAATCCTTCCCTGCGTGAAAGCATCGGTGTGCTCCTCCA
GGACCTGGAGTCCGGAGAGGCCTTTTACCGGGCCCTGGGACGGCAGCCCCGGGTCTATCCCCCTATCGTTATCCATACCG
TCGAGGCCGGTGAACTGGGAGGCGCCCTGGACGAGACCCTGGAGCGCCTGGCCGGGCACCTGGAAAGGGAGCATGAGGTG
GAGGAAAAGGTCAAATCGGCCCTGACCTACCCGGCGGTGGTGAGCCTGGTAGCGGTGGGGGCGGTTATCTTCCTCCTCAC
CTACGTCCTGCCCTCCTTTCAGGTGATGTTAAACAGCCTGCAGGTTCCCCTGCCCTGGCCGACGCGGATGATCCTGGGGT
TGAGTGAAGGACTGCGGCGCTGGTGGTTTGTCCTGGTACTTCTCCTGGCTGGCGCCGGTTACGGGTTTTACCGCTGGCGG
CAGGGTCCGGACGGGCGGTATCAGGTCGACCACCTGCTTTTACGTTTGCCGATCTTCGGACCCGTACATCAGAAGACACT
TTTAGCCCGCTTCAGCCGTACCCTGGGTACCCTCCTGCACAGCGGCGTGCCCGTTTTGCTGGCCCTGGAAGTAGTGCGGC
GCACCGTGGGCAACGCCGTGGTGGCCAGAGCGGTGGAGCGGGCGGCCGAGAGCGTACGCGACGGGCAGAGCCTGGCGGCT
CCCCTGGAAGCGAGCGGGATCTTCCCTCCCATGATGGTGGAAATGATTACGGTGGGCGAGGAAACGGGAGCCCTGGACGC
TATGCTCGAGCGGGTGGCAGTCCTTTATGAGCTGGAGGTGGAGGCGGTCGTAAGCCGCCTGGCCTCACTGATAGAACCCG
TCCTCATCGTCGGCCTCGGCGGCATAGTAGGGCTGATCGTGATTTCGGTCTTTCTGCCCTACTTTCAGATGCTGGGCGGC
ATAAAGTAG

Upstream 100 bases:

>100_bases
CGGGCCTGCAGACGCAAGTCATGGCCGCCGGGCTGCCGGGGAAGAGTTTTGCCTTTCCCTGCTACCGGTGGCTATTTATT
TATATGTTTGGAGGGGAAGC

Downstream 100 bases:

>100_bases
AGGGCGCCGGGGTATCTTTTTTCTCATTTTGACGATGGCTACTCTAGCAGCCTGCCCTCATGACAATGCCCTGGCCGGCG
GTTCCATGTCGAGGAGTGCC

Product: type II secretion system protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 402

Protein sequence:

>402_residues
MNFAYRGRDARGNAVSGNLEAENQEVAIQELRRQGIFITSLRPVDVKPALDWRGLFRRPVSRRDLALFCRQLATMLGAGL
PIMSALRVLQRQVENPSLRESIGVLLQDLESGEAFYRALGRQPRVYPPIVIHTVEAGELGGALDETLERLAGHLEREHEV
EEKVKSALTYPAVVSLVAVGAVIFLLTYVLPSFQVMLNSLQVPLPWPTRMILGLSEGLRRWWFVLVLLLAGAGYGFYRWR
QGPDGRYQVDHLLLRLPIFGPVHQKTLLARFSRTLGTLLHSGVPVLLALEVVRRTVGNAVVARAVERAAESVRDGQSLAA
PLEASGIFPPMMVEMITVGEETGALDAMLERVAVLYELEVEAVVSRLASLIEPVLIVGLGGIVGLIVISVFLPYFQMLGG
IK

Sequences:

>Translated_402_residues
MNFAYRGRDARGNAVSGNLEAENQEVAIQELRRQGIFITSLRPVDVKPALDWRGLFRRPVSRRDLALFCRQLATMLGAGL
PIMSALRVLQRQVENPSLRESIGVLLQDLESGEAFYRALGRQPRVYPPIVIHTVEAGELGGALDETLERLAGHLEREHEV
EEKVKSALTYPAVVSLVAVGAVIFLLTYVLPSFQVMLNSLQVPLPWPTRMILGLSEGLRRWWFVLVLLLAGAGYGFYRWR
QGPDGRYQVDHLLLRLPIFGPVHQKTLLARFSRTLGTLLHSGVPVLLALEVVRRTVGNAVVARAVERAAESVRDGQSLAA
PLEASGIFPPMMVEMITVGEETGALDAMLERVAVLYELEVEAVVSRLASLIEPVLIVGLGGIVGLIVISVFLPYFQMLGG
IK
>Mature_402_residues
MNFAYRGRDARGNAVSGNLEAENQEVAIQELRRQGIFITSLRPVDVKPALDWRGLFRRPVSRRDLALFCRQLATMLGAGL
PIMSALRVLQRQVENPSLRESIGVLLQDLESGEAFYRALGRQPRVYPPIVIHTVEAGELGGALDETLERLAGHLEREHEV
EEKVKSALTYPAVVSLVAVGAVIFLLTYVLPSFQVMLNSLQVPLPWPTRMILGLSEGLRRWWFVLVLLLAGAGYGFYRWR
QGPDGRYQVDHLLLRLPIFGPVHQKTLLARFSRTLGTLLHSGVPVLLALEVVRRTVGNAVVARAVERAAESVRDGQSLAA
PLEASGIFPPMMVEMITVGEETGALDAMLERVAVLYELEVEAVVSRLASLIEPVLIVGLGGIVGLIVISVFLPYFQMLGG
IK

Specific function: Involved in the translocation of the type IV pilin [H]

COG id: COG1459

COG function: function code NU; Type II secretory pathway, component PulF

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP F family [H]

Homologues:

Organism=Escherichia coli, GI1789724, Length=398, Percent_Identity=32.9145728643216, Blast_Score=211, Evalue=5e-56,
Organism=Escherichia coli, GI1786295, Length=396, Percent_Identity=31.3131313131313, Blast_Score=162, Evalue=4e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003004
- InterPro:   IPR018076
- InterPro:   IPR001992 [H]

Pfam domain/function: PF00482 GSPII_F [H]

EC number: NA

Molecular weight: Translated: 44307; Mature: 44307

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: PS00874 T2SP_F

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFAYRGRDARGNAVSGNLEAENQEVAIQELRRQGIFITSLRPVDVKPALDWRGLFRRPV
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHCCC
SRRDLALFCRQLATMLGAGLPIMSALRVLQRQVENPSLRESIGVLLQDLESGEAFYRALG
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHC
RQPRVYPPIVIHTVEAGELGGALDETLERLAGHLEREHEVEEKVKSALTYPAVVSLVAVG
CCCCCCCCEEEEEECCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVIFLLTYVLPSFQVMLNSLQVPLPWPTRMILGLSEGLRRWWFVLVLLLAGAGYGFYRWR
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
QGPDGRYQVDHLLLRLPIFGPVHQKTLLARFSRTLGTLLHSGVPVLLALEVVRRTVGNAV
CCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
VARAVERAAESVRDGQSLAAPLEASGIFPPMMVEMITVGEETGALDAMLERVAVLYELEV
HHHHHHHHHHHHHCCHHHCCCCHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
EAVVSRLASLIEPVLIVGLGGIVGLIVISVFLPYFQMLGGIK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNFAYRGRDARGNAVSGNLEAENQEVAIQELRRQGIFITSLRPVDVKPALDWRGLFRRPV
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHCCC
SRRDLALFCRQLATMLGAGLPIMSALRVLQRQVENPSLRESIGVLLQDLESGEAFYRALG
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHC
RQPRVYPPIVIHTVEAGELGGALDETLERLAGHLEREHEVEEKVKSALTYPAVVSLVAVG
CCCCCCCCEEEEEECCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVIFLLTYVLPSFQVMLNSLQVPLPWPTRMILGLSEGLRRWWFVLVLLLAGAGYGFYRWR
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
QGPDGRYQVDHLLLRLPIFGPVHQKTLLARFSRTLGTLLHSGVPVLLALEVVRRTVGNAV
CCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
VARAVERAAESVRDGQSLAAPLEASGIFPPMMVEMITVGEETGALDAMLERVAVLYELEV
HHHHHHHHHHHHHCCHHHCCCCHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
EAVVSRLASLIEPVLIVGLGGIVGLIVISVFLPYFQMLGGIK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8820654 [H]