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The map label for this gene is deoB

Identifier: 83590343

GI number: 83590343

Start: 1545678

End: 1546847

Strand: Reverse

Name: deoB

Synonym: Moth_1500

Alternate gene names: 83590343

Gene position: 1546847-1545678 (Counterclockwise)

Preceding gene: 83590344

Following gene: 83590342

Centisome position: 58.84

GC content: 60.09

Gene sequence:

>1170_bases
ATGAAGTTAGATCGGGTCATCATCATCGTTCTTGATAGCGTTGGCGTCGGGGCGCTGCCTGACGCTGCCCAATACGGGGA
CGAAGGCAGTAACACCCTGGCTCATATTGCCGCTACTGTAGACCTCAGGCTACCCAATCTTACCCGCCTGGGGGTGGGTA
ACATCACTCCCCTGCGGGGTATTCCCCCGGTAGGCACTCCGGCTGCCGCCTGGGGTAAGATGGCTTCCCAAACGGCCGGC
AAGGACACCACCAGCGGGCACTGGGAACTGGCCGGGTTGATTTTAGAACGACCCTTTCCCCTCTACCCCCATGGCTTCCC
GCCGGAGATAATTGAGCCTTTTGAAAAGGCCATCGGCCGCCGGGTCCTGGGTAATAAACCGGCTTCGGGTACGGTAATAA
TCGAGGAACTTGGAGCCGAACATATGCGCACCGGTAATCCCATTGTCTACACCTCGGCCGATAGCGTCTTCCAGATTGCC
GCCCATGAAGAGGTCATTCCGGTGGAAGAGCTCTACCGCTATTGTAAGATTGCCCGGCGGCTGTTGACCGGGGAACATGC
CGTCGGCCGGGTAATTGCCAGGCCCTTTGTCGGGGAGCCGGGGCATTTTATCCGTACCGACCGGCGTCAGGACTTTTCCC
TGGAGCCGCCCCGGCCAACCCTGCTGGACGCCGTCATCGCCGCCGGCCTGGAGGTAATGGCCGTAGGTAAAATAAAGGAT
ATTTTTGCGGGCAGGGGTATCAGCCGCTGGATCCACACCCACGACAACATGGACGGCGTCGACCAGACCCGCAACTTTAT
GCGCGAGGGCGAGCGGGGCCTCATTTTTACCAATCTGGTGGACTTTGATATGCGTTACGGCCACCGCAACGACGTGGCCG
GTTATGCCGCTGCCCTGGAGGCCTTTGACCGGCGCCTGCCGGAGCTCCTGGACGCCCTGGAAACCAGCGACGCCCTGATC
CTGACCGCCGATCATGGCTGTGACCCGACCACCCCGAGTACCGATCACTCCCGGGAATATGTGCCCCTCTTAATTTACGG
GAAACGCATCCGGCCACTGAATATCGGTGTTCGCCCGACCTTCGCCGACCTGGGCGCCACGGTGGCCGACCTTTTGGGCG
TGCCTTATGACCTGCCCGGGAAAAGCTTTGCTTCCATGTTGCTGGAGTAA

Upstream 100 bases:

>100_bases
ATATAGGTACGACCCAGATCTATACCCACCTGACCCGGAAGAAAATCCGGGAGATTTATGATCACACCCACCCGCGGGCG
TAATGGAGGAAAGGATTGCC

Downstream 100 bases:

>100_bases
AATGGCATGTGGGGCGGGGCCTGTCCTGAAGAAGGATGGGTCGTTTTCTTTTATGCAGGTTATCATCAACTGCCGGGATT
CACCCCTCATATTTTTGCCC

Product: phosphopentomutase

Products: NA

Alternate protein names: Phosphodeoxyribomutase

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MKLDRVIIIVLDSVGVGALPDAAQYGDEGSNTLAHIAATVDLRLPNLTRLGVGNITPLRGIPPVGTPAAAWGKMASQTAG
KDTTSGHWELAGLILERPFPLYPHGFPPEIIEPFEKAIGRRVLGNKPASGTVIIEELGAEHMRTGNPIVYTSADSVFQIA
AHEEVIPVEELYRYCKIARRLLTGEHAVGRVIARPFVGEPGHFIRTDRRQDFSLEPPRPTLLDAVIAAGLEVMAVGKIKD
IFAGRGISRWIHTHDNMDGVDQTRNFMREGERGLIFTNLVDFDMRYGHRNDVAGYAAALEAFDRRLPELLDALETSDALI
LTADHGCDPTTPSTDHSREYVPLLIYGKRIRPLNIGVRPTFADLGATVADLLGVPYDLPGKSFASMLLE

Sequences:

>Translated_389_residues
MKLDRVIIIVLDSVGVGALPDAAQYGDEGSNTLAHIAATVDLRLPNLTRLGVGNITPLRGIPPVGTPAAAWGKMASQTAG
KDTTSGHWELAGLILERPFPLYPHGFPPEIIEPFEKAIGRRVLGNKPASGTVIIEELGAEHMRTGNPIVYTSADSVFQIA
AHEEVIPVEELYRYCKIARRLLTGEHAVGRVIARPFVGEPGHFIRTDRRQDFSLEPPRPTLLDAVIAAGLEVMAVGKIKD
IFAGRGISRWIHTHDNMDGVDQTRNFMREGERGLIFTNLVDFDMRYGHRNDVAGYAAALEAFDRRLPELLDALETSDALI
LTADHGCDPTTPSTDHSREYVPLLIYGKRIRPLNIGVRPTFADLGATVADLLGVPYDLPGKSFASMLLE
>Mature_389_residues
MKLDRVIIIVLDSVGVGALPDAAQYGDEGSNTLAHIAATVDLRLPNLTRLGVGNITPLRGIPPVGTPAAAWGKMASQTAG
KDTTSGHWELAGLILERPFPLYPHGFPPEIIEPFEKAIGRRVLGNKPASGTVIIEELGAEHMRTGNPIVYTSADSVFQIA
AHEEVIPVEELYRYCKIARRLLTGEHAVGRVIARPFVGEPGHFIRTDRRQDFSLEPPRPTLLDAVIAAGLEVMAVGKIKD
IFAGRGISRWIHTHDNMDGVDQTRNFMREGERGLIFTNLVDFDMRYGHRNDVAGYAAALEAFDRRLPELLDALETSDALI
LTADHGCDPTTPSTDHSREYVPLLIYGKRIRPLNIGVRPTFADLGATVADLLGVPYDLPGKSFASMLLE

Specific function: Phosphotransfer between the C1 and C5 carbon atoms of pentose

COG id: COG1015

COG function: function code G; Phosphopentomutase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphopentomutase family

Homologues:

Organism=Escherichia coli, GI1790843, Length=399, Percent_Identity=47.6190476190476, Blast_Score=334, Evalue=7e-93,
Organism=Escherichia coli, GI1789781, Length=412, Percent_Identity=30.5825242718447, Blast_Score=134, Evalue=1e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): DEOB_MOOTA (Q2RID0)

Other databases:

- EMBL:   CP000232
- RefSeq:   YP_430352.1
- ProteinModelPortal:   Q2RID0
- SMR:   Q2RID0
- STRING:   Q2RID0
- GeneID:   3831727
- GenomeReviews:   CP000232_GR
- KEGG:   mta:Moth_1500
- NMPDR:   fig|264732.9.peg.1504
- eggNOG:   COG1015
- HOGENOM:   HBG644230
- OMA:   CHASGTE
- PhylomeDB:   Q2RID0
- ProtClustDB:   PRK05362
- BioCyc:   MTHE264732:MOTH_1500-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00740
- InterPro:   IPR017849
- InterPro:   IPR017850
- InterPro:   IPR010045
- InterPro:   IPR006124
- Gene3D:   G3DSA:3.40.720.10
- PIRSF:   PIRSF001491
- TIGRFAMs:   TIGR01696

Pfam domain/function: PF01676 Metalloenzyme; SSF53649 Alkaline_phosphatase_core

EC number: =5.4.2.7

Molecular weight: Translated: 42460; Mature: 42460

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLDRVIIIVLDSVGVGALPDAAQYGDEGSNTLAHIAATVDLRLPNLTRLGVGNITPLRG
CCCCEEEEEEEECCCCCCCCCHHHCCCCCCCCCEEEEEEEEEECCCCEECCCCCCCCCCC
IPPVGTPAAAWGKMASQTAGKDTTSGHWELAGLILERPFPLYPHGFPPEIIEPFEKAIGR
CCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
RVLGNKPASGTVIIEELGAEHMRTGNPIVYTSADSVFQIAAHEEVIPVEELYRYCKIARR
HHHCCCCCCCEEEHHHHCHHHHCCCCCEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHH
LLTGEHAVGRVIARPFVGEPGHFIRTDRRQDFSLEPPRPTLLDAVIAAGLEVMAVGKIKD
HHCCCHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEHHHHHH
IFAGRGISRWIHTHDNMDGVDQTRNFMREGERGLIFTNLVDFDMRYGHRNDVAGYAAALE
HHHCCCHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEEEEEHHHHHCCCCCCHHHHHHHHH
AFDRRLPELLDALETSDALILTADHGCDPTTPSTDHSREYVPLLIYGKRIRPLNIGVRPT
HHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEECCEEEEEECCCCCC
FADLGATVADLLGVPYDLPGKSFASMLLE
HHHHHHHHHHHHCCCCCCCCHHHHHHHCC
>Mature Secondary Structure
MKLDRVIIIVLDSVGVGALPDAAQYGDEGSNTLAHIAATVDLRLPNLTRLGVGNITPLRG
CCCCEEEEEEEECCCCCCCCCHHHCCCCCCCCCEEEEEEEEEECCCCEECCCCCCCCCCC
IPPVGTPAAAWGKMASQTAGKDTTSGHWELAGLILERPFPLYPHGFPPEIIEPFEKAIGR
CCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
RVLGNKPASGTVIIEELGAEHMRTGNPIVYTSADSVFQIAAHEEVIPVEELYRYCKIARR
HHHCCCCCCCEEEHHHHCHHHHCCCCCEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHH
LLTGEHAVGRVIARPFVGEPGHFIRTDRRQDFSLEPPRPTLLDAVIAAGLEVMAVGKIKD
HHCCCHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEHHHHHH
IFAGRGISRWIHTHDNMDGVDQTRNFMREGERGLIFTNLVDFDMRYGHRNDVAGYAAALE
HHHCCCHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEEEEEHHHHHCCCCCCHHHHHHHHH
AFDRRLPELLDALETSDALILTADHGCDPTTPSTDHSREYVPLLIYGKRIRPLNIGVRPT
HHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEECCEEEEEECCCCCC
FADLGATVADLLGVPYDLPGKSFASMLLE
HHHHHHHHHHHHCCCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA