Click here to switch to the map view.

The map label for this gene is ycgM [C]

Identifier: 83590335

GI number: 83590335

Start: 1540319

End: 1541095

Strand: Reverse

Name: ycgM [C]

Synonym: Moth_1492

Alternate gene names: 83590335

Gene position: 1541095-1540319 (Counterclockwise)

Preceding gene: 83590337

Following gene: 83590334

Centisome position: 58.62

GC content: 58.82

Gene sequence:

>777_bases
ATGGAAAGAAGCGAGAAGATAGTACGTTTTAGCGCTGGGGGTGAGGTTTTTTACGGCCGCCTGGAAGGGGCGAAAATCCT
GGCCCTGGAGGGCGAAATCTTTGGCCCCTGCCGGGAAAGCGGGCGCCAATTTAGCCTGGACGAAGTTCGCCTCCTGGCCC
CATGCCGGCCGGGCAAGGCCGTGTGTGTTGGTCTGAATTACCGCAACCATATTACCGAGATGAGCGAAAAGCTACCGGAG
GAACCGGTGATCTTTATAAAACCGTCCACCAGCGTCATCGGCCCCGGGGAGACGATTATTTACTGGCCTATGGTGGGCCG
CCTGGATTATGAAGCCGAACTGGCGGTGGTCATCGGCCGCGAGGCCCATAACGTCGAGGAAAGAGAGGCGGCAGACTATA
TTTTTGGCTACACCATAGCCAACGATGTCACGGCCCGGGACCTGCAGCAGAAGGACGGCCAGTGGACCAGGGCCAAGGGT
TTCGACACCTTTCTGCCCTGCGGTCCCTGGATTGTCCGGGGTATCGACGCCGGCGACCTTCGGGTCCAGGCCTTCCTGAA
CGGAGAATTGAAGCAGGACGGGCGTACTTCCCAGTTGATTTTCCCGGTACCCAGGCTGGTCAGTTTTATCTCTCGGGTGA
TGACCCTCCACCCGGGGGACCTGATCCTTACCGGCACCCCTGCAGGTGTGGGCCCTATGCAGGTGGGCGATACCATTGAA
ATCAGGGTGGAGAACATCGGCAGCCTGGTCAATAGGGTCGCCGCACCGGTGATATAA

Upstream 100 bases:

>100_bases
CAGCCCCGTCGAGCCCCCGGAGGGCTTTTTGCGGTGACTTAAAAGCTGTAAATATAGTACAATAATTTTATGGCTTCAAC
AGGAAAGGGGAGGGCTACAA

Downstream 100 bases:

>100_bases
CTGGACTATGGTACGGAGTGGTCTGAGTTACCCCGGTTTTGAGTACTGAACAGGAACTCATCAGCGCCTTGCTGGCTTTA
AGTGCCGGGGAAAGGTGCCC

Product: 5-carboxymethyl-2-hydroxymuconate delta-isomerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MERSEKIVRFSAGGEVFYGRLEGAKILALEGEIFGPCRESGRQFSLDEVRLLAPCRPGKAVCVGLNYRNHITEMSEKLPE
EPVIFIKPSTSVIGPGETIIYWPMVGRLDYEAELAVVIGREAHNVEEREAADYIFGYTIANDVTARDLQQKDGQWTRAKG
FDTFLPCGPWIVRGIDAGDLRVQAFLNGELKQDGRTSQLIFPVPRLVSFISRVMTLHPGDLILTGTPAGVGPMQVGDTIE
IRVENIGSLVNRVAAPVI

Sequences:

>Translated_258_residues
MERSEKIVRFSAGGEVFYGRLEGAKILALEGEIFGPCRESGRQFSLDEVRLLAPCRPGKAVCVGLNYRNHITEMSEKLPE
EPVIFIKPSTSVIGPGETIIYWPMVGRLDYEAELAVVIGREAHNVEEREAADYIFGYTIANDVTARDLQQKDGQWTRAKG
FDTFLPCGPWIVRGIDAGDLRVQAFLNGELKQDGRTSQLIFPVPRLVSFISRVMTLHPGDLILTGTPAGVGPMQVGDTIE
IRVENIGSLVNRVAAPVI
>Mature_258_residues
MERSEKIVRFSAGGEVFYGRLEGAKILALEGEIFGPCRESGRQFSLDEVRLLAPCRPGKAVCVGLNYRNHITEMSEKLPE
EPVIFIKPSTSVIGPGETIIYWPMVGRLDYEAELAVVIGREAHNVEEREAADYIFGYTIANDVTARDLQQKDGQWTRAKG
FDTFLPCGPWIVRGIDAGDLRVQAFLNGELKQDGRTSQLIFPVPRLVSFISRVMTLHPGDLILTGTPAGVGPMQVGDTIE
IRVENIGSLVNRVAAPVI

Specific function: Unknown

COG id: COG0179

COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FAH family [H]

Homologues:

Organism=Homo sapiens, GI156231349, Length=220, Percent_Identity=39.5454545454545, Blast_Score=174, Evalue=8e-44,
Organism=Homo sapiens, GI40786394, Length=220, Percent_Identity=39.0909090909091, Blast_Score=168, Evalue=3e-42,
Organism=Homo sapiens, GI13654274, Length=202, Percent_Identity=40.0990099009901, Blast_Score=154, Evalue=8e-38,
Organism=Homo sapiens, GI66348062, Length=192, Percent_Identity=40.625, Blast_Score=150, Evalue=1e-36,
Organism=Homo sapiens, GI215422413, Length=192, Percent_Identity=40.625, Blast_Score=149, Evalue=2e-36,
Organism=Escherichia coli, GI1787428, Length=202, Percent_Identity=39.6039603960396, Blast_Score=137, Evalue=6e-34,
Organism=Caenorhabditis elegans, GI17557057, Length=189, Percent_Identity=40.2116402116402, Blast_Score=138, Evalue=3e-33,
Organism=Saccharomyces cerevisiae, GI6324161, Length=223, Percent_Identity=32.7354260089686, Blast_Score=129, Evalue=4e-31,
Organism=Drosophila melanogaster, GI28572127, Length=223, Percent_Identity=39.4618834080717, Blast_Score=175, Evalue=3e-44,
Organism=Drosophila melanogaster, GI28571789, Length=203, Percent_Identity=37.4384236453202, Blast_Score=140, Evalue=1e-33,
Organism=Drosophila melanogaster, GI24663695, Length=217, Percent_Identity=35.4838709677419, Blast_Score=136, Evalue=1e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002529
- InterPro:   IPR011234 [H]

Pfam domain/function: PF01557 FAA_hydrolase [H]

EC number: NA

Molecular weight: Translated: 28427; Mature: 28427

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERSEKIVRFSAGGEVFYGRLEGAKILALEGEIFGPCRESGRQFSLDEVRLLAPCRPGKA
CCCCCEEEEEECCCCEEEEEECCEEEEEECCCCCCHHHHCCCEECCCCEEEEECCCCCCE
VCVGLNYRNHITEMSEKLPEEPVIFIKPSTSVIGPGETIIYWPMVGRLDYEAELAVVIGR
EEEECCCHHHHHHHHHHCCCCCEEEECCCCCEECCCCEEEEECCCCCCCCCCEEEEEECC
EAHNVEEREAADYIFGYTIANDVTARDLQQKDGQWTRAKGFDTFLPCGPWIVRGIDAGDL
CCCCCCHHHHHHEEEEEEECCCCHHHHHHHCCCCEEECCCCCCCCCCCCHHEECCCCCCE
RVQAFLNGELKQDGRTSQLIFPVPRLVSFISRVMTLHPGDLILTGTPAGVGPMQVGDTIE
EEEEEECCCCCCCCCCCEEEECHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCEEE
IRVENIGSLVNRVAAPVI
EEEHHHHHHHHHHHCCCC
>Mature Secondary Structure
MERSEKIVRFSAGGEVFYGRLEGAKILALEGEIFGPCRESGRQFSLDEVRLLAPCRPGKA
CCCCCEEEEEECCCCEEEEEECCEEEEEECCCCCCHHHHCCCEECCCCEEEEECCCCCCE
VCVGLNYRNHITEMSEKLPEEPVIFIKPSTSVIGPGETIIYWPMVGRLDYEAELAVVIGR
EEEECCCHHHHHHHHHHCCCCCEEEECCCCCEECCCCEEEEECCCCCCCCCCEEEEEECC
EAHNVEEREAADYIFGYTIANDVTARDLQQKDGQWTRAKGFDTFLPCGPWIVRGIDAGDL
CCCCCCHHHHHHEEEEEEECCCCHHHHHHHCCCCEEECCCCCCCCCCCCHHEECCCCCCE
RVQAFLNGELKQDGRTSQLIFPVPRLVSFISRVMTLHPGDLILTGTPAGVGPMQVGDTIE
EEEEEECCCCCCCCCCCEEEECHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCEEE
IRVENIGSLVNRVAAPVI
EEEHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]