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The map label for this gene is ugpB [H]

Identifier: 83590328

GI number: 83590328

Start: 1531169

End: 1532503

Strand: Reverse

Name: ugpB [H]

Synonym: Moth_1484

Alternate gene names: 83590328

Gene position: 1532503-1531169 (Counterclockwise)

Preceding gene: 83590329

Following gene: 83590327

Centisome position: 58.3

GC content: 52.51

Gene sequence:

>1335_bases
ATGATAAACTGTAAGTGGCGTAAACCCCTGGGAATTGCCCTGCTAGTGGCAACCATGGCGAGTAGCCTGGTGACAGGTTG
CGGTCCGGGAAACCCGGCGAAAGGTACCGGCCAGGAGAAGACAGGCGGTAAGGTAACAACAATTGAATACTGGCATGTTA
ACTCGGAAAACTTTGGCGGGCAGACCGTCCGCGATCTGGTGCAGAAGTTTAACGAACAGCACCCGGACATTAAAGTAGTT
GAAAAGTTTCAACCCAACATGTACCTGGGGTTAATGCAAAATTTACAGGCCGCCCTGGCGGGGGGCCATCCTCCGGCAGT
AGCCCAGATTGGCTATAATTACCTTGACTACGCCACCGCCAACTTGCCCCACCTGCCGGTAGAAGACGCCGCTAAAAAGG
ATCCCGAGGGGCAGGCTTTTCTAAATAACTATCTGCCCAATATCTTAAACCTGGGCCGGGTTAACGGCAAACTGGAAGGT
ATGCCCTATTCCATCAGCAACCCTGTCCTATATTACAACGCCGACATGTTTAAAGCAGCCGGCCTGGATCCTCAAAATCC
ACCTAAGACCTGGGCCGAGGTACGGGATATGGCCAGGATAATCAAAGAGAAAACCGGCAACTACGGCCTTTATGTGCAGG
AGCCTTCCGACAACTGGGCCCAGCAGGCCATGATGGAGTCCAATGGCGCTCAGGTACTGACCAGGACGGGAGGTAAGGCC
AGCGCTACCTTTGATAGCCCCGAAGCCATAGAAGCTTACCAGTTGATGGCCGACATGGTTTTAAAGGATAAGACGGCCTT
GCACGCCACCTGGGAGGAAGGTACCCAGGCCTTTATTACGGGAAAAGTGGGAATGTATGTTACAACTATTGCCAGGAGAA
ATTATATTGAAACTTCTTCTAAGTTTAAGGTTTTAGCGGCTCCTTTTCCAACCTTCGGTAACAAACCGCGGCGGGTCCCG
GCCGGAGGTAATGCCCTGTTTATCTTCGCTAAAGATCCTGACCAGCAAAAGGCTGCCTGGGAGTTCATCAAGTACCTGGA
ATCCCCCGAGGCTTTAACAACCTGGACCAAAGGTACTGGCTATCTGCCTCCCCGGAAAGATGTGACCGAAGATCCCAACT
ACCTGAAACCTTTCATGGACCAGAATCCGTTAATGAAGCCGGCGGCAGCTCAGCTTCCCGACGCTGTTCCCTGGGTAAGT
TTTCCCGGCAATAACGGTCTTCAGGCCGAACAGATCCTCCTGGACGCCAGGGATGCCATCCTCGGCGGTCGCCAGTCGGC
AGCAGAAGCCCTGAAGGAAGCCGTGGCTAAGGTAAATAAATTAATCGGCAATTAA

Upstream 100 bases:

>100_bases
TTTACATTATCTTAAATTTGATTTAATTGGTGTTTAACTTTAACGCAATACTTCCATAGTAAAATAAACCTTGCTGATAA
AATAAGATAGGAGGGAGAAG

Downstream 100 bases:

>100_bases
GGTGACGTAGAATGAAAATCGCAAGGGAAACCAGTCCAAGGTTTGCTGCCATCAAGGGTTATCTGGTACCCGGGGGATGC
CTTGCCCCCGCCCTGGCTTT

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 444; Mature: 444

Protein sequence:

>444_residues
MINCKWRKPLGIALLVATMASSLVTGCGPGNPAKGTGQEKTGGKVTTIEYWHVNSENFGGQTVRDLVQKFNEQHPDIKVV
EKFQPNMYLGLMQNLQAALAGGHPPAVAQIGYNYLDYATANLPHLPVEDAAKKDPEGQAFLNNYLPNILNLGRVNGKLEG
MPYSISNPVLYYNADMFKAAGLDPQNPPKTWAEVRDMARIIKEKTGNYGLYVQEPSDNWAQQAMMESNGAQVLTRTGGKA
SATFDSPEAIEAYQLMADMVLKDKTALHATWEEGTQAFITGKVGMYVTTIARRNYIETSSKFKVLAAPFPTFGNKPRRVP
AGGNALFIFAKDPDQQKAAWEFIKYLESPEALTTWTKGTGYLPPRKDVTEDPNYLKPFMDQNPLMKPAAAQLPDAVPWVS
FPGNNGLQAEQILLDARDAILGGRQSAAEALKEAVAKVNKLIGN

Sequences:

>Translated_444_residues
MINCKWRKPLGIALLVATMASSLVTGCGPGNPAKGTGQEKTGGKVTTIEYWHVNSENFGGQTVRDLVQKFNEQHPDIKVV
EKFQPNMYLGLMQNLQAALAGGHPPAVAQIGYNYLDYATANLPHLPVEDAAKKDPEGQAFLNNYLPNILNLGRVNGKLEG
MPYSISNPVLYYNADMFKAAGLDPQNPPKTWAEVRDMARIIKEKTGNYGLYVQEPSDNWAQQAMMESNGAQVLTRTGGKA
SATFDSPEAIEAYQLMADMVLKDKTALHATWEEGTQAFITGKVGMYVTTIARRNYIETSSKFKVLAAPFPTFGNKPRRVP
AGGNALFIFAKDPDQQKAAWEFIKYLESPEALTTWTKGTGYLPPRKDVTEDPNYLKPFMDQNPLMKPAAAQLPDAVPWVS
FPGNNGLQAEQILLDARDAILGGRQSAAEALKEAVAKVNKLIGN
>Mature_444_residues
MINCKWRKPLGIALLVATMASSLVTGCGPGNPAKGTGQEKTGGKVTTIEYWHVNSENFGGQTVRDLVQKFNEQHPDIKVV
EKFQPNMYLGLMQNLQAALAGGHPPAVAQIGYNYLDYATANLPHLPVEDAAKKDPEGQAFLNNYLPNILNLGRVNGKLEG
MPYSISNPVLYYNADMFKAAGLDPQNPPKTWAEVRDMARIIKEKTGNYGLYVQEPSDNWAQQAMMESNGAQVLTRTGGKA
SATFDSPEAIEAYQLMADMVLKDKTALHATWEEGTQAFITGKVGMYVTTIARRNYIETSSKFKVLAAPFPTFGNKPRRVP
AGGNALFIFAKDPDQQKAAWEFIKYLESPEALTTWTKGTGYLPPRKDVTEDPNYLKPFMDQNPLMKPAAAQLPDAVPWVS
FPGNNGLQAEQILLDARDAILGGRQSAAEALKEAVAKVNKLIGN

Specific function: sn-glycerol-3-phosphate and glycerophosphoryl diester- binding protein interacts with the binding protein-dependent transport system ugpACE [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

Organism=Escherichia coli, GI1789862, Length=425, Percent_Identity=28, Blast_Score=130, Evalue=1e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059
- InterPro:   IPR006061 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 48611; Mature: 48611

Theoretical pI: Translated: 8.14; Mature: 8.14

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINCKWRKPLGIALLVATMASSLVTGCGPGNPAKGTGQEKTGGKVTTIEYWHVNSENFGG
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCC
QTVRDLVQKFNEQHPDIKVVEKFQPNMYLGLMQNLQAALAGGHPPAVAQIGYNYLDYATA
HHHHHHHHHHHCCCCCEEEHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHCC
NLPHLPVEDAAKKDPEGQAFLNNYLPNILNLGRVNGKLEGMPYSISNPVLYYNADMFKAA
CCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEECCCCEECCCCEEEEECCHHHHC
GLDPQNPPKTWAEVRDMARIIKEKTGNYGLYVQEPSDNWAQQAMMESNGAQVLTRTGGKA
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHCCCCEEEEECCCCC
SATFDSPEAIEAYQLMADMVLKDKTALHATWEEGTQAFITGKVGMYVTTIARRNYIETSS
CCCCCCHHHHHHHHHHHHHHHHCCHHEEEEHHCCCEEEEEECCHHHHHHHHHHCHHCCCC
KFKVLAAPFPTFGNKPRRVPAGGNALFIFAKDPDQQKAAWEFIKYLESPEALTTWTKGTG
CEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCHHEEECCCCC
YLPPRKDVTEDPNYLKPFMDQNPLMKPAAAQLPDAVPWVSFPGNNGLQAEQILLDARDAI
CCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHCCCCCCEEECCCCCCCCHHHHHHHHHHHH
LGGRQSAAEALKEAVAKVNKLIGN
HCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MINCKWRKPLGIALLVATMASSLVTGCGPGNPAKGTGQEKTGGKVTTIEYWHVNSENFGG
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCC
QTVRDLVQKFNEQHPDIKVVEKFQPNMYLGLMQNLQAALAGGHPPAVAQIGYNYLDYATA
HHHHHHHHHHHCCCCCEEEHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHCC
NLPHLPVEDAAKKDPEGQAFLNNYLPNILNLGRVNGKLEGMPYSISNPVLYYNADMFKAA
CCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEECCCCEECCCCEEEEECCHHHHC
GLDPQNPPKTWAEVRDMARIIKEKTGNYGLYVQEPSDNWAQQAMMESNGAQVLTRTGGKA
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHCCCCEEEEECCCCC
SATFDSPEAIEAYQLMADMVLKDKTALHATWEEGTQAFITGKVGMYVTTIARRNYIETSS
CCCCCCHHHHHHHHHHHHHHHHCCHHEEEEHHCCCEEEEEECCHHHHHHHHHHCHHCCCC
KFKVLAAPFPTFGNKPRRVPAGGNALFIFAKDPDQQKAAWEFIKYLESPEALTTWTKGTG
CEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCHHEEECCCCC
YLPPRKDVTEDPNYLKPFMDQNPLMKPAAAQLPDAVPWVSFPGNNGLQAEQILLDARDAI
CCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHCCCCCCEEECCCCCCCCHHHHHHHHHHHH
LGGRQSAAEALKEAVAKVNKLIGN
HCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]