| Definition | Moorella thermoacetica ATCC 39073, complete genome. |
|---|---|
| Accession | NC_007644 |
| Length | 2,628,784 |
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The map label for this gene is nrdD [H]
Identifier: 83590293
GI number: 83590293
Start: 1491892
End: 1494009
Strand: Reverse
Name: nrdD [H]
Synonym: Moth_1449
Alternate gene names: 83590293
Gene position: 1494009-1491892 (Counterclockwise)
Preceding gene: 83590294
Following gene: 83590292
Centisome position: 56.83
GC content: 56.0
Gene sequence:
>2118_bases ATGATACCGAAGAAAATCATCAAGCGCGACGGCCGGGTAGTGGACTTTGACGAGGAAAGGATTATCAATGCTATTTACAA AGCGGCCCAGGCTGTCGGGGGCCAGGACCGGCGCCAGGCCAGCCAACTGGCCAACCAGGTGACGGCCCTTCTGGCGGAAA AATTTGTCGACAGGCTGCCTACCGTCGAAGACGTACAGGACCTGGTGGAAAAAGTATTGATTGAGAACGGCCATGCCCGG ACGGCCAAGGCTTATATCCTTTACCGGCAACAACATGCGGAATGGCGGGATTTTCGCCACCTCCTGGTCAACGTGCAGGA AATGGTCCAGGGCTACCTTGACGGTCAGGACTGGCGGATTAATGAGAACAGCAACATGAATTATTCCCTCCAGGGCCTCA ACAACCATATCATTGCCGCCGTCAGTTCCAGGTACTGGCTGGAAAAGGTCTACCCGCCGGCTATCCGCGAGGCCCATGAA AGGGGCGATATTCATATCCACGATCTGGGGTTGCTGGCGCCCTATTGCTGTGGCTGGGACCTGGCCGATTTACTGGAAAG CGGCTTTGCCGGCGTGGGGCAGAAGGTGGAAAGCGCGCCGCCCAGGCATTTCCGGACGGCCCTGGGGCAGATAGCCAATT TCTTTTATACCTTGCAGGGAGAAGCAGCTGGTGCCCAGGCCTTTTCCAGTTTCGATACTTACCTCGCTCCCTTTATCCGT TACGACGGCCTGGACTACCGGGAAGTCAAGCAGGCCCTGCAGGAGTTTATCTTTAATCTCAATGTGCCCACCAGGGTGGG TTTCCAGACGCCCTTTGTCAACCTGACCATGGATGTGGTCGTACCGCAGGTTTTAGCCGGCGAGCCGGTGATCATCGGCG GCGAGCGGCGTAAGGAATGCTACGGCGACTTCCAGCAAGAGATGGACTGGCTGAATATAGCCTTTTGCGAGGTGATGATG GAGGGGGACGCCCGGGGCCGCATTTTTACCTTCCCTATACCCACGTACAACATCACGCCTGATTTTCCCTGGGAAAGCCC GGTGGCAGACAGGATCATGGCCATGACGGCCAAATACGGCATCCCCTACTTTGCCAACTTTATCAACTCCGATTTAAAGC CCGAAGACGTACGCAGCATGTGCTGCCGCCTGCGCCTGGATAACCGGGAACTGAAGAAACGCGGCGGCGGTCTTTTCGGC GCCAATCCCCTTACGGGCTCTATCGGCGTAGTAACCATTAATTTGCCCAGGCTGGGTTACGTGAGTTCATCGAAAGAAGA GTTCTTCACCAGTTTAAAAGCGAAAATGGACCTGGCCAAAGAGAGCCTGCTCCTCAAGCGCAACATCCTGGAGAAGCTGA CGGAGCAGGGGCTTTATCCTTACTCCCGATTCTACCTGCGGCAGGTTAAGGAGCGTTTCGGTAGGTACTGGGAGAACCAT TTTAATACCATTGGTATCGTGGGCATGCACGAGGCCCTCTTGAACTTCATGAAGAAAGGTATCGAGACCCGCGATGGGAG GGGCCTGGCTTTAGAAATCCTGGACTTTATGCGTTCTGTCCTGGCCACCTACCAGGCGGAAACCGGCCAGCTCTTCAATC TGGAGGCCACCCCGGCGGAAGGTACCTCTTACCGCCTGGCCCGACTGGACAGGCGTCTTTATCCTGATATTATCACCTCC GGGACAAACGAACCGTATTACACCAATTCCACCCATTTGCCGGTCGGCTACACTGACGATGTGTTTACCGCCTTGGAGCA CCAGGACGAGTTGCAACTAAAATATACCGGGGGTACGGTCTTTCACGCCTACCTGGGGGAAAGGGTGACGGATACGGTAA CCTGCCGACGTTTTCTGCAGACAGTGATGCATAATTTCCGCCTGCCCTATTTCACTATTACGCCTACCTTCAGCATCTGC CCCGAGCACGGGTATCTTTCCGGCGAGCACTGGACATGCCCGGCCTGCGGCCGGGAAACAGAGGTCTGGAGCCGGATCGT CGGCTATTACCGGCCGGTGAAGAACTGGAATAAAGGCAAGCAGGAGGAGTTCCGGGAACGGCGGGGCTTCCGTCCTGTCT CCTGCGGCGACGAACAAACACGCCAGGCGGCAGTTTAG
Upstream 100 bases:
>100_bases ACGGCCATGGTGAAGGTGAGGTAAGGGAGGATTTACCCCAGCTACGCAGGCGTGGTTGGGGTTTTTCATTTTCATAGGTG AAGGGAGATTAAGTTTAATC
Downstream 100 bases:
>100_bases GTTGCCTGTTTTAAGGAAGTGATCCCTATCGTCATTAGAGGTATCCAGTTAACGAGCCTGGTGGACTTCCCCGGCGAGGT TTGCACTACCGTCTTTTTGG
Product: anaerobic ribonucleoside triphosphate reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 705; Mature: 705
Protein sequence:
>705_residues MIPKKIIKRDGRVVDFDEERIINAIYKAAQAVGGQDRRQASQLANQVTALLAEKFVDRLPTVEDVQDLVEKVLIENGHAR TAKAYILYRQQHAEWRDFRHLLVNVQEMVQGYLDGQDWRINENSNMNYSLQGLNNHIIAAVSSRYWLEKVYPPAIREAHE RGDIHIHDLGLLAPYCCGWDLADLLESGFAGVGQKVESAPPRHFRTALGQIANFFYTLQGEAAGAQAFSSFDTYLAPFIR YDGLDYREVKQALQEFIFNLNVPTRVGFQTPFVNLTMDVVVPQVLAGEPVIIGGERRKECYGDFQQEMDWLNIAFCEVMM EGDARGRIFTFPIPTYNITPDFPWESPVADRIMAMTAKYGIPYFANFINSDLKPEDVRSMCCRLRLDNRELKKRGGGLFG ANPLTGSIGVVTINLPRLGYVSSSKEEFFTSLKAKMDLAKESLLLKRNILEKLTEQGLYPYSRFYLRQVKERFGRYWENH FNTIGIVGMHEALLNFMKKGIETRDGRGLALEILDFMRSVLATYQAETGQLFNLEATPAEGTSYRLARLDRRLYPDIITS GTNEPYYTNSTHLPVGYTDDVFTALEHQDELQLKYTGGTVFHAYLGERVTDTVTCRRFLQTVMHNFRLPYFTITPTFSIC PEHGYLSGEHWTCPACGRETEVWSRIVGYYRPVKNWNKGKQEEFRERRGFRPVSCGDEQTRQAAV
Sequences:
>Translated_705_residues MIPKKIIKRDGRVVDFDEERIINAIYKAAQAVGGQDRRQASQLANQVTALLAEKFVDRLPTVEDVQDLVEKVLIENGHAR TAKAYILYRQQHAEWRDFRHLLVNVQEMVQGYLDGQDWRINENSNMNYSLQGLNNHIIAAVSSRYWLEKVYPPAIREAHE RGDIHIHDLGLLAPYCCGWDLADLLESGFAGVGQKVESAPPRHFRTALGQIANFFYTLQGEAAGAQAFSSFDTYLAPFIR YDGLDYREVKQALQEFIFNLNVPTRVGFQTPFVNLTMDVVVPQVLAGEPVIIGGERRKECYGDFQQEMDWLNIAFCEVMM EGDARGRIFTFPIPTYNITPDFPWESPVADRIMAMTAKYGIPYFANFINSDLKPEDVRSMCCRLRLDNRELKKRGGGLFG ANPLTGSIGVVTINLPRLGYVSSSKEEFFTSLKAKMDLAKESLLLKRNILEKLTEQGLYPYSRFYLRQVKERFGRYWENH FNTIGIVGMHEALLNFMKKGIETRDGRGLALEILDFMRSVLATYQAETGQLFNLEATPAEGTSYRLARLDRRLYPDIITS GTNEPYYTNSTHLPVGYTDDVFTALEHQDELQLKYTGGTVFHAYLGERVTDTVTCRRFLQTVMHNFRLPYFTITPTFSIC PEHGYLSGEHWTCPACGRETEVWSRIVGYYRPVKNWNKGKQEEFRERRGFRPVSCGDEQTRQAAV >Mature_705_residues MIPKKIIKRDGRVVDFDEERIINAIYKAAQAVGGQDRRQASQLANQVTALLAEKFVDRLPTVEDVQDLVEKVLIENGHAR TAKAYILYRQQHAEWRDFRHLLVNVQEMVQGYLDGQDWRINENSNMNYSLQGLNNHIIAAVSSRYWLEKVYPPAIREAHE RGDIHIHDLGLLAPYCCGWDLADLLESGFAGVGQKVESAPPRHFRTALGQIANFFYTLQGEAAGAQAFSSFDTYLAPFIR YDGLDYREVKQALQEFIFNLNVPTRVGFQTPFVNLTMDVVVPQVLAGEPVIIGGERRKECYGDFQQEMDWLNIAFCEVMM EGDARGRIFTFPIPTYNITPDFPWESPVADRIMAMTAKYGIPYFANFINSDLKPEDVRSMCCRLRLDNRELKKRGGGLFG ANPLTGSIGVVTINLPRLGYVSSSKEEFFTSLKAKMDLAKESLLLKRNILEKLTEQGLYPYSRFYLRQVKERFGRYWENH FNTIGIVGMHEALLNFMKKGIETRDGRGLALEILDFMRSVLATYQAETGQLFNLEATPAEGTSYRLARLDRRLYPDIITS GTNEPYYTNSTHLPVGYTDDVFTALEHQDELQLKYTGGTVFHAYLGERVTDTVTCRRFLQTVMHNFRLPYFTITPTFSIC PEHGYLSGEHWTCPACGRETEVWSRIVGYYRPVKNWNKGKQEEFRERRGFRPVSCGDEQTRQAAV
Specific function: Unknown
COG id: COG1328
COG function: function code F; Oxygen-sensitive ribonucleoside-triphosphate reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glycine radical domain [H]
Homologues:
Organism=Escherichia coli, GI1790686, Length=760, Percent_Identity=23.5526315789474, Blast_Score=141, Evalue=1e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005144 - InterPro: IPR001150 - InterPro: IPR019777 - InterPro: IPR012833 [H]
Pfam domain/function: PF03477 ATP-cone; PF01228 Gly_radical [H]
EC number: =1.17.4.2 [H]
Molecular weight: Translated: 80729; Mature: 80729
Theoretical pI: Translated: 6.83; Mature: 6.83
Prosite motif: PS51161 ATP_CONE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPKKIIKRDGRVVDFDEERIINAIYKAAQAVGGQDRRQASQLANQVTALLAEKFVDRLP CCCHHHHHCCCCEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC TVEDVQDLVEKVLIENGHARTAKAYILYRQQHAEWRDFRHLLVNVQEMVQGYLDGQDWRI CHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE NENSNMNYSLQGLNNHIIAAVSSRYWLEKVYPPAIREAHERGDIHIHDLGLLAPYCCGWD CCCCCCCEEEECCCCEEEEEHHHHHHHHHCCCHHHHHHHHCCCEEEEEHHHHHHHHCCCC LADLLESGFAGVGQKVESAPPRHFRTALGQIANFFYTLQGEAAGAQAFSSFDTYLAPFIR HHHHHHCCHHHCCCHHHCCCCHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHH YDGLDYREVKQALQEFIFNLNVPTRVGFQTPFVNLTMDVVVPQVLAGEPVIIGGERRKEC CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHEEHHHHHHHHHCCCCEEECCCHHHHH YGDFQQEMDWLNIAFCEVMMEGDARGRIFTFPIPTYNITPDFPWESPVADRIMAMTAKYG HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCC IPYFANFINSDLKPEDVRSMCCRLRLDNRELKKRGGGLFGANPLTGSIGVVTINLPRLGY CHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCC VSSSKEEFFTSLKAKMDLAKESLLLKRNILEKLTEQGLYPYSRFYLRQVKERFGRYWENH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH FNTIGIVGMHEALLNFMKKGIETRDGRGLALEILDFMRSVLATYQAETGQLFNLEATPAE CCCEEEEHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCC GTSYRLARLDRRLYPDIITSGTNEPYYTNSTHLPVGYTDDVFTALEHQDELQLKYTGGTV CCHHHHHHHHHHHCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCEE FHAYLGERVTDTVTCRRFLQTVMHNFRLPYFTITPTFSICPEHGYLSGEHWTCPACGRET EHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEECCCCCCCCCCCCCCCCCCCHH EVWSRIVGYYRPVKNWNKGKQEEFRERRGFRPVSCGDEQTRQAAV HHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCHHHHHCCC >Mature Secondary Structure MIPKKIIKRDGRVVDFDEERIINAIYKAAQAVGGQDRRQASQLANQVTALLAEKFVDRLP CCCHHHHHCCCCEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC TVEDVQDLVEKVLIENGHARTAKAYILYRQQHAEWRDFRHLLVNVQEMVQGYLDGQDWRI CHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE NENSNMNYSLQGLNNHIIAAVSSRYWLEKVYPPAIREAHERGDIHIHDLGLLAPYCCGWD CCCCCCCEEEECCCCEEEEEHHHHHHHHHCCCHHHHHHHHCCCEEEEEHHHHHHHHCCCC LADLLESGFAGVGQKVESAPPRHFRTALGQIANFFYTLQGEAAGAQAFSSFDTYLAPFIR HHHHHHCCHHHCCCHHHCCCCHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHH YDGLDYREVKQALQEFIFNLNVPTRVGFQTPFVNLTMDVVVPQVLAGEPVIIGGERRKEC CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHEEHHHHHHHHHCCCCEEECCCHHHHH YGDFQQEMDWLNIAFCEVMMEGDARGRIFTFPIPTYNITPDFPWESPVADRIMAMTAKYG HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCC IPYFANFINSDLKPEDVRSMCCRLRLDNRELKKRGGGLFGANPLTGSIGVVTINLPRLGY CHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCC VSSSKEEFFTSLKAKMDLAKESLLLKRNILEKLTEQGLYPYSRFYLRQVKERFGRYWENH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH FNTIGIVGMHEALLNFMKKGIETRDGRGLALEILDFMRSVLATYQAETGQLFNLEATPAE CCCEEEEHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCC GTSYRLARLDRRLYPDIITSGTNEPYYTNSTHLPVGYTDDVFTALEHQDELQLKYTGGTV CCHHHHHHHHHHHCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCEE FHAYLGERVTDTVTCRRFLQTVMHNFRLPYFTITPTFSICPEHGYLSGEHWTCPACGRET EHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEECCCCCCCCCCCCCCCCCCCHH EVWSRIVGYYRPVKNWNKGKQEEFRERRGFRPVSCGDEQTRQAAV HHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]