Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
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Accession | NC_007643 |
Length | 4,352,825 |
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The map label for this gene is rrmA [C]
Identifier: 83593888
GI number: 83593888
Start: 2968578
End: 2969267
Strand: Direct
Name: rrmA [C]
Synonym: Rru_A2553
Alternate gene names: 83593888
Gene position: 2968578-2969267 (Clockwise)
Preceding gene: 83593887
Following gene: 83593893
Centisome position: 68.2
GC content: 71.01
Gene sequence:
>690_bases ATGACGAAACCGCGCGGCAATACCGAGGTGCTTCTGGAAGCCCTGCCCCCGGCGGGGCGGGCGCTGGTCGATGTCGGTTG CGGCGATGGCGCCCTGGCCCGGGTGCTGGCCGCCAAGGGGGCGCGCTCGGTGCTTGGGTTTGATGTCGCCGACCGCCAGT TGGCCCTGGCCCTGGCGGCGCCGACGGTCGCGGGCGTGGCCTATGTCAAGGCCGGCGCCCAGGCGATGCCCTTGGCCGAA GCCAGCGTCGACGGCGTGATCTTCTTCAACAGCCTCCACCACATTCCCCAGCCGCTGATGGCCCGGGCCCTGGGGGAAGC CGCCCGGGTCATCCGTCCAGGCGGCCTGATCTATGTCGCCGAACCGATCGCCGAAGGCCCCAACTTCGAGATGCTCCGCC CGCTCGACGATGAAACCCAGGTCCGCGCCCAGGCCCAGGCCTGCCTTGACGGGGCCGAGGATCTTGGCCTGCGCCGGCTG CGGAGCTTCGCCTATCGCACACGGATCCGCCGCGCCTCGTTCGACGAGATCCGCCTGCGCTTCACCGCCATCCATTCAGA CCGCGATCAGGCCTTCGCCGCCGTGGAACCGGCGCTGCGCTTGTCCTTCGAGCGCCTGGGCGTCGAGGACGGCACGGGCG GCCGCGTCTTTGACCAGCCGATGCGCGCGGCGCTGTTCACCCGCCCCTGA
Upstream 100 bases:
>100_bases ACGCCACCATCGAACGCCGCAAGCATTGCGCCGAATTCGTCGCCGCCTTCGAGCGCGCCAACAAGGTGCAGTACCGGCCC GAACGCCCGCAGCTCATCGG
Downstream 100 bases:
>100_bases CGCCCCTTCTCACGCCTCGCGCACTTCCTTGAGGAACCGCTCGACCTCGCGCTCAAGGGTGGCGCTTTCACTTTGCAGGT CGTCGGCCGACTGGAACACC
Product: ubiquinone/menaquinone biosynthesis methylase-like protein
Products: S-adenosyl-L-homocysteine +rRNA containing Nmethylguanine [C]
Alternate protein names: Methylase; Ubiquinone/Menaquinone Biosynthesis Methylase-Like Protein
Number of amino acids: Translated: 229; Mature: 228
Protein sequence:
>229_residues MTKPRGNTEVLLEALPPAGRALVDVGCGDGALARVLAAKGARSVLGFDVADRQLALALAAPTVAGVAYVKAGAQAMPLAE ASVDGVIFFNSLHHIPQPLMARALGEAARVIRPGGLIYVAEPIAEGPNFEMLRPLDDETQVRAQAQACLDGAEDLGLRRL RSFAYRTRIRRASFDEIRLRFTAIHSDRDQAFAAVEPALRLSFERLGVEDGTGGRVFDQPMRAALFTRP
Sequences:
>Translated_229_residues MTKPRGNTEVLLEALPPAGRALVDVGCGDGALARVLAAKGARSVLGFDVADRQLALALAAPTVAGVAYVKAGAQAMPLAE ASVDGVIFFNSLHHIPQPLMARALGEAARVIRPGGLIYVAEPIAEGPNFEMLRPLDDETQVRAQAQACLDGAEDLGLRRL RSFAYRTRIRRASFDEIRLRFTAIHSDRDQAFAAVEPALRLSFERLGVEDGTGGRVFDQPMRAALFTRP >Mature_228_residues TKPRGNTEVLLEALPPAGRALVDVGCGDGALARVLAAKGARSVLGFDVADRQLALALAAPTVAGVAYVKAGAQAMPLAEA SVDGVIFFNSLHHIPQPLMARALGEAARVIRPGGLIYVAEPIAEGPNFEMLRPLDDETQVRAQAQACLDGAEDLGLRRLR SFAYRTRIRRASFDEIRLRFTAIHSDRDQAFAAVEPALRLSFERLGVEDGTGGRVFDQPMRAALFTRP
Specific function: Specifically Methylates The Guanosine In Position 745 Of 23s rRNA. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.1.1.51 [C]
Molecular weight: Translated: 24571; Mature: 24439
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKPRGNTEVLLEALPPAGRALVDVGCGDGALARVLAAKGARSVLGFDVADRQLALALAA CCCCCCCHHHHEECCCCCCCEEEEECCCCHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHC PTVAGVAYVKAGAQAMPLAEASVDGVIFFNSLHHIPQPLMARALGEAARVIRPGGLIYVA CHHHHHHHHHCCCCCCCCHHCCCCCEEEECCHHHCCHHHHHHHHHHHHHHCCCCCEEEEE EPIAEGPNFEMLRPLDDETQVRAQAQACLDGAEDLGLRRLRSFAYRTRIRRASFDEIRLR CCCCCCCCCCEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHEEE FTAIHSDRDQAFAAVEPALRLSFERLGVEDGTGGRVFDQPMRAALFTRP EEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCC >Mature Secondary Structure TKPRGNTEVLLEALPPAGRALVDVGCGDGALARVLAAKGARSVLGFDVADRQLALALAA CCCCCCHHHHEECCCCCCCEEEEECCCCHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHC PTVAGVAYVKAGAQAMPLAEASVDGVIFFNSLHHIPQPLMARALGEAARVIRPGGLIYVA CHHHHHHHHHCCCCCCCCHHCCCCCEEEECCHHHCCHHHHHHHHHHHHHHCCCCCEEEEE EPIAEGPNFEMLRPLDDETQVRAQAQACLDGAEDLGLRRLRSFAYRTRIRRASFDEIRLR CCCCCCCCCCEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHEEE FTAIHSDRDQAFAAVEPALRLSFERLGVEDGTGGRVFDQPMRAALFTRP EEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: Unidentified protein factor B [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: S-Adenosyl-L-methionine; rRNA [C]
Specific reaction: S-Adenosyl-L-methionine + rRNA = S-adenosyl-L-homocysteine +rRNA containing Nmethylguanine [C]
General reaction: Methyl group transfer [C]
Inhibitor: Mg2+; Unidentified protein factor A1 [C]
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA