Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
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Accession | NC_007643 |
Length | 4,352,825 |
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The map label for this gene is 83593887
Identifier: 83593887
GI number: 83593887
Start: 2967727
End: 2968581
Strand: Direct
Name: 83593887
Synonym: Rru_A2552
Alternate gene names: NA
Gene position: 2967727-2968581 (Clockwise)
Preceding gene: 83593884
Following gene: 83593888
Centisome position: 68.18
GC content: 62.69
Gene sequence:
>855_bases ATGGCATCCATAGGGCCAATCACCCTCTTCCGGGAAAAAACCTCGGTTCACACCTTCGACGATGAGCCGGAGCTTCCCGA TCAGGACACCTCTTTCACGATCCGCTCCAATCGGGTTGTCCTGGAGTTGGCCGCTTCGCACCGCAAAAGCCAAGTGGTCG TGCGCGGTCAAACCATCGCCGCGACGCTGCGCCTCAGCGCCCTGGTGATCGATCACTTCCTGCGCGATTCCCAGGTTTTC CAGCGATCCGTGCCGATCGACTGGGCCGATCTGTGGGCGCGCAAGCAAAGCGATTTCGAGCGGCGCCATCACCCGGAATC CTGGGTTTCCATTCATGCCGACGGCCGGGCCGCCTTTGTCACCCGCGGTTCGGAAGCCATCGACATGATCGAAGAGGTGG CCAAGGGCCAGGATCTGACCAATGATCTGATCAAGACCGCCACCTGGAATTTGCTGGGCAAGGCCGAAGATATCGTTGTC CGCCACGAAAGCCAGACCGCCGTCGTCTTCTCGCCCTTTCCCACCCATCTGCGGGCGGCGGTGCTCGAACGCCGGGGCGG GCGCACCGGTTCCTTTTCCGTCTCGGCCTTTCACCAAACCGATCGCAAGATCCGTCTTAGCGCCTTCATCAATTTCCTGG CCGATCTGGTCGAGGCGATCACGCTGAAGGAATTGATGGAACGCGCCCGTCCGGCCGGCGCCGGCGAAGAGGCCGGGCCC GTGGCCTCGCCGATCCCCCTTGACCAGATCGACGCCACCATCGAACGCCGCAAGCATTGCGCCGAATTCGTCGCCGCCTT CGAGCGCGCCAACAAGGTGCAGTACCGGCCCGAACGCCCGCAGCTCATCGGATGA
Upstream 100 bases:
>100_bases GTCTCACGGTAGACAATCGCTCCAAATATCTGGATTATTAAGGCCATCCCGCGCCCGGCACCGCCGCCGCGCCCAATCCG CAACGATAGCAAGAGCATCG
Downstream 100 bases:
>100_bases CGAAACCGCGCGGCAATACCGAGGTGCTTCTGGAAGCCCTGCCCCCGGCGGGGCGGGCGCTGGTCGATGTCGGTTGCGGC GATGGCGCCCTGGCCCGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MASIGPITLFREKTSVHTFDDEPELPDQDTSFTIRSNRVVLELAASHRKSQVVVRGQTIAATLRLSALVIDHFLRDSQVF QRSVPIDWADLWARKQSDFERRHHPESWVSIHADGRAAFVTRGSEAIDMIEEVAKGQDLTNDLIKTATWNLLGKAEDIVV RHESQTAVVFSPFPTHLRAAVLERRGGRTGSFSVSAFHQTDRKIRLSAFINFLADLVEAITLKELMERARPAGAGEEAGP VASPIPLDQIDATIERRKHCAEFVAAFERANKVQYRPERPQLIG
Sequences:
>Translated_284_residues MASIGPITLFREKTSVHTFDDEPELPDQDTSFTIRSNRVVLELAASHRKSQVVVRGQTIAATLRLSALVIDHFLRDSQVF QRSVPIDWADLWARKQSDFERRHHPESWVSIHADGRAAFVTRGSEAIDMIEEVAKGQDLTNDLIKTATWNLLGKAEDIVV RHESQTAVVFSPFPTHLRAAVLERRGGRTGSFSVSAFHQTDRKIRLSAFINFLADLVEAITLKELMERARPAGAGEEAGP VASPIPLDQIDATIERRKHCAEFVAAFERANKVQYRPERPQLIG >Mature_283_residues ASIGPITLFREKTSVHTFDDEPELPDQDTSFTIRSNRVVLELAASHRKSQVVVRGQTIAATLRLSALVIDHFLRDSQVFQ RSVPIDWADLWARKQSDFERRHHPESWVSIHADGRAAFVTRGSEAIDMIEEVAKGQDLTNDLIKTATWNLLGKAEDIVVR HESQTAVVFSPFPTHLRAAVLERRGGRTGSFSVSAFHQTDRKIRLSAFINFLADLVEAITLKELMERARPAGAGEEAGPV ASPIPLDQIDATIERRKHCAEFVAAFERANKVQYRPERPQLIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31838; Mature: 31707
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASIGPITLFREKTSVHTFDDEPELPDQDTSFTIRSNRVVLELAASHRKSQVVVRGQTIA CCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEECCCCCCEEEEECCHHH ATLRLSALVIDHFLRDSQVFQRSVPIDWADLWARKQSDFERRHHPESWVSIHADGRAAFV HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHEEEECCCEEEEE TRGSEAIDMIEEVAKGQDLTNDLIKTATWNLLGKAEDIVVRHESQTAVVFSPFPTHLRAA ECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEECCCHHHHHHH VLERRGGRTGSFSVSAFHQTDRKIRLSAFINFLADLVEAITLKELMERARPAGAGEEAGP HHHHCCCCCCCEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC VASPIPLDQIDATIERRKHCAEFVAAFERANKVQYRPERPQLIG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure ASIGPITLFREKTSVHTFDDEPELPDQDTSFTIRSNRVVLELAASHRKSQVVVRGQTIA CCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEECCCCCCEEEEECCHHH ATLRLSALVIDHFLRDSQVFQRSVPIDWADLWARKQSDFERRHHPESWVSIHADGRAAFV HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHEEEECCCEEEEE TRGSEAIDMIEEVAKGQDLTNDLIKTATWNLLGKAEDIVVRHESQTAVVFSPFPTHLRAA ECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEECCCHHHHHHH VLERRGGRTGSFSVSAFHQTDRKIRLSAFINFLADLVEAITLKELMERARPAGAGEEAGP HHHHCCCCCCCEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC VASPIPLDQIDATIERRKHCAEFVAAFERANKVQYRPERPQLIG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA