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The map label for this gene is 83593877

Identifier: 83593877

GI number: 83593877

Start: 2955554

End: 2957236

Strand: Direct

Name: 83593877

Synonym: Rru_A2542

Alternate gene names: NA

Gene position: 2955554-2957236 (Clockwise)

Preceding gene: 83593875

Following gene: 83593878

Centisome position: 67.9

GC content: 59.12

Gene sequence:

>1683_bases
ATGTCTGGACCCGCTGGCATTAGAAAATCACGCACCGGCATTGCCGGCTTCGATGAACTCACGCTTGGCGGTTTGCCAAC
CGGCCGGCCAACCCTAGTCTGCGGCTCGGCGGGATGCGGCAAAACGCTGTTTGCCGCCACCTTCCTTGTCCATGGGGTCA
AGGATTTCGACGAACCGGGCGTCTTCGTCAGCTTCGAAGAGCGCCCGGTCGATATCATCGACAATGTCGCATCGCTGGGC
TTCCACCTTGACGATTTGATCGAGGAGGGCCGGGTGGTTATCGAACATATCGCCGTCGACCCTTCGGAAGTCGCCGAAAT
CGGCGATTACGATCTCGAGGGCCTGTTTCTCCGCCTGGAATTGGCCATCGACACCATCGGCGCCAAACGGGTGGTTCTTG
ATACCATCGAAAGCCTGTTCTCGGCCTTTTCCAATCCGGCCATCCTGCGCGCCGAGATCCGCCGCCTGTTCGACTGGCTC
AAGGAAAAGGGGATGACCACCGTCATCACCGGCGAGCGCGGCGAAGGCTCGCTAACCCGCCAGGGCCTGGAAGAATATGT
GTCCGATTGCGTCTTGCTGCTCGATCACCGGGTCGAGAACCAGATTTCAACCCGCCGCCTGCGCATCGTCAAATATCGCG
GCACCAATCACGGCACCAATGAATATCCCTTCCTCATCGACGAGGATGGGTTCAGCGTTCTTCCCGTCTCCGCCCTGGGC
TTAAGCCATAAGATCTATGACGAGCGGATCTCCACGGGCGTGGCCGATCTCGACGCGATGCTGAGCGGCGGCGGCTTCCA
CCGGGGATCAAGCATCCTGGTCTCGGGTGTCGCCGGATCGGGCAAATCATCGCTCGCCGCCAGTTTTGTCGATGCGACCT
GCCGGGCCGGCGAAAGCGTGATCTATTTCTCCTTCGAGGAATCGCACGAGCAAGCGACCCGCAACATGAAATCGATCGGT
ATCGATCTTGGCCAATGGATGGCGAGCGGGCAACTGAAGTACATCGCGACGCGACCGACCTTCTATAGCCTGGAAATGCA
TCTGGCGATCGTCTTGCGCGAGGTGATCAAACTGAAGCCAAGCTTGGTCATTCTCGATCCGATTTCCGCCTTCACCGAAA
GCGGCGAGCGCCTGGAGGTCCAGGGCATGCTGCTGCGGATCGTCGACTTCCTGAAGTCGCGCGGCGTGACCGGGGTTTTC
ACCCATTTGATGCAAAGCGGCGACAACCTTATAAAAACCGATGCCGGGCTTTCATCGTTGATGGACGCCTGGATCCTTTT
GCTGAATCGGGAAGTGAACGGCGAATTCAATCGAGAGCTTTATCTTCTCAAGGCGCGCGGCATGGAGCATTCCAATCAGG
TCCGCGAATTCGTGATGAGCCGATCGGGTATCTCGTTGCTGCCCCCCTATATTGGGGAAGGCGGGGCGCTGACCGGCTCG
GCCCGCAAGATCGAGGAGGCCCGTCAGGCGCGGCTGGAAACCGAGCGGCGGATCGAGGCGGCGCGGCTCAAGCGCGAGAT
CGAGCAACGACATCGGCGCAATCGCGCCCAGATCGACCTGCTTCAGGCCGAATCCGCCGCCGATCAGATCGAACTCGATA
CCCTTAAAAAGCGCGAAGAGGACTACCTGAGACAGATCGAACAAGACAAACGCGATTTGGAGAAAAGTCGACGCGTCTCC
TAG

Upstream 100 bases:

>100_bases
CCCCTTTACCTCATCAACCAAACTGATCTCTTGTTCCGTTTTTTTTGTTGGTTTAGACCCCCCCCATTCGCGCACAGACG
GATAAGGTAACGGATAAGCA

Downstream 100 bases:

>100_bases
ATCTGGCTTGATGGAATCGCGTTCGACGAGCCCCGGTCAACGCGGTTCGAGGTGGGGTGGAGGGAGGCTTGGGATATGGA
CATGACGATGAATAGCCCAC

Product: circadian clock protein KaiC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 560; Mature: 559

Protein sequence:

>560_residues
MSGPAGIRKSRTGIAGFDELTLGGLPTGRPTLVCGSAGCGKTLFAATFLVHGVKDFDEPGVFVSFEERPVDIIDNVASLG
FHLDDLIEEGRVVIEHIAVDPSEVAEIGDYDLEGLFLRLELAIDTIGAKRVVLDTIESLFSAFSNPAILRAEIRRLFDWL
KEKGMTTVITGERGEGSLTRQGLEEYVSDCVLLLDHRVENQISTRRLRIVKYRGTNHGTNEYPFLIDEDGFSVLPVSALG
LSHKIYDERISTGVADLDAMLSGGGFHRGSSILVSGVAGSGKSSLAASFVDATCRAGESVIYFSFEESHEQATRNMKSIG
IDLGQWMASGQLKYIATRPTFYSLEMHLAIVLREVIKLKPSLVILDPISAFTESGERLEVQGMLLRIVDFLKSRGVTGVF
THLMQSGDNLIKTDAGLSSLMDAWILLLNREVNGEFNRELYLLKARGMEHSNQVREFVMSRSGISLLPPYIGEGGALTGS
ARKIEEARQARLETERRIEAARLKREIEQRHRRNRAQIDLLQAESAADQIELDTLKKREEDYLRQIEQDKRDLEKSRRVS

Sequences:

>Translated_560_residues
MSGPAGIRKSRTGIAGFDELTLGGLPTGRPTLVCGSAGCGKTLFAATFLVHGVKDFDEPGVFVSFEERPVDIIDNVASLG
FHLDDLIEEGRVVIEHIAVDPSEVAEIGDYDLEGLFLRLELAIDTIGAKRVVLDTIESLFSAFSNPAILRAEIRRLFDWL
KEKGMTTVITGERGEGSLTRQGLEEYVSDCVLLLDHRVENQISTRRLRIVKYRGTNHGTNEYPFLIDEDGFSVLPVSALG
LSHKIYDERISTGVADLDAMLSGGGFHRGSSILVSGVAGSGKSSLAASFVDATCRAGESVIYFSFEESHEQATRNMKSIG
IDLGQWMASGQLKYIATRPTFYSLEMHLAIVLREVIKLKPSLVILDPISAFTESGERLEVQGMLLRIVDFLKSRGVTGVF
THLMQSGDNLIKTDAGLSSLMDAWILLLNREVNGEFNRELYLLKARGMEHSNQVREFVMSRSGISLLPPYIGEGGALTGS
ARKIEEARQARLETERRIEAARLKREIEQRHRRNRAQIDLLQAESAADQIELDTLKKREEDYLRQIEQDKRDLEKSRRVS
>Mature_559_residues
SGPAGIRKSRTGIAGFDELTLGGLPTGRPTLVCGSAGCGKTLFAATFLVHGVKDFDEPGVFVSFEERPVDIIDNVASLGF
HLDDLIEEGRVVIEHIAVDPSEVAEIGDYDLEGLFLRLELAIDTIGAKRVVLDTIESLFSAFSNPAILRAEIRRLFDWLK
EKGMTTVITGERGEGSLTRQGLEEYVSDCVLLLDHRVENQISTRRLRIVKYRGTNHGTNEYPFLIDEDGFSVLPVSALGL
SHKIYDERISTGVADLDAMLSGGGFHRGSSILVSGVAGSGKSSLAASFVDATCRAGESVIYFSFEESHEQATRNMKSIGI
DLGQWMASGQLKYIATRPTFYSLEMHLAIVLREVIKLKPSLVILDPISAFTESGERLEVQGMLLRIVDFLKSRGVTGVFT
HLMQSGDNLIKTDAGLSSLMDAWILLLNREVNGEFNRELYLLKARGMEHSNQVREFVMSRSGISLLPPYIGEGGALTGSA
RKIEEARQARLETERRIEAARLKREIEQRHRRNRAQIDLLQAESAADQIELDTLKKREEDYLRQIEQDKRDLEKSRRVS

Specific function: Unknown

COG id: COG0467

COG function: function code T; RecA-superfamily ATPases implicated in signal transduction

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 kaiC domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR014774
- InterPro:   IPR010624 [H]

Pfam domain/function: PF06745 KaiC [H]

EC number: NA

Molecular weight: Translated: 62105; Mature: 61973

Theoretical pI: Translated: 5.46; Mature: 5.46

Prosite motif: PS51146 KAIC ; PS50162 RECA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGPAGIRKSRTGIAGFDELTLGGLPTGRPTLVCGSAGCGKTLFAATFLVHGVKDFDEPG
CCCCCCCCCCCCCCCCCCCCEECCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCC
VFVSFEERPVDIIDNVASLGFHLDDLIEEGRVVIEHIAVDPSEVAEIGDYDLEGLFLRLE
EEEEECCCCHHHHHHHHHHCCCHHHHHHCCCEEEHHHCCCHHHHHHCCCCCCCCEEEEEE
LAIDTIGAKRVVLDTIESLFSAFSNPAILRAEIRRLFDWLKEKGMTTVITGERGEGSLTR
EEHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHH
QGLEEYVSDCVLLLDHRVENQISTRRLRIVKYRGTNHGTNEYPFLIDEDGFSVLPVSALG
HHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCCCCCCCEEECCCCCCEEEHHHHC
LSHKIYDERISTGVADLDAMLSGGGFHRGSSILVSGVAGSGKSSLAASFVDATCRAGESV
CHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCEE
IYFSFEESHEQATRNMKSIGIDLGQWMASGQLKYIATRPTFYSLEMHLAIVLREVIKLKP
EEEEEHHHHHHHHHHHHHHCCCHHHHHHCCCEEEEEECCEEEEHHHHHHHHHHHHHHCCC
SLVILDPISAFTESGERLEVQGMLLRIVDFLKSRGVTGVFTHLMQSGDNLIKTDAGLSSL
CEEEECCHHHHHCCCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEECCCCHHHH
MDAWILLLNREVNGEFNRELYLLKARGMEHSNQVREFVMSRSGISLLPPYIGEGGALTGS
HHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
ARKIEEARQARLETERRIEAARLKREIEQRHRRNRAQIDLLQAESAADQIELDTLKKREE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHCCCCHHHHHHHHHHHH
DYLRQIEQDKRDLEKSRRVS
HHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SGPAGIRKSRTGIAGFDELTLGGLPTGRPTLVCGSAGCGKTLFAATFLVHGVKDFDEPG
CCCCCCCCCCCCCCCCCCCEECCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCC
VFVSFEERPVDIIDNVASLGFHLDDLIEEGRVVIEHIAVDPSEVAEIGDYDLEGLFLRLE
EEEEECCCCHHHHHHHHHHCCCHHHHHHCCCEEEHHHCCCHHHHHHCCCCCCCCEEEEEE
LAIDTIGAKRVVLDTIESLFSAFSNPAILRAEIRRLFDWLKEKGMTTVITGERGEGSLTR
EEHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHH
QGLEEYVSDCVLLLDHRVENQISTRRLRIVKYRGTNHGTNEYPFLIDEDGFSVLPVSALG
HHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCCCCCCCEEECCCCCCEEEHHHHC
LSHKIYDERISTGVADLDAMLSGGGFHRGSSILVSGVAGSGKSSLAASFVDATCRAGESV
CHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCEE
IYFSFEESHEQATRNMKSIGIDLGQWMASGQLKYIATRPTFYSLEMHLAIVLREVIKLKP
EEEEEHHHHHHHHHHHHHHCCCHHHHHHCCCEEEEEECCEEEEHHHHHHHHHHHHHHCCC
SLVILDPISAFTESGERLEVQGMLLRIVDFLKSRGVTGVFTHLMQSGDNLIKTDAGLSSL
CEEEECCHHHHHCCCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEECCCCHHHH
MDAWILLLNREVNGEFNRELYLLKARGMEHSNQVREFVMSRSGISLLPPYIGEGGALTGS
HHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
ARKIEEARQARLETERRIEAARLKREIEQRHRRNRAQIDLLQAESAADQIELDTLKKREE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHCCCCHHHHHHHHHHHH
DYLRQIEQDKRDLEKSRRVS
HHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]