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The map label for this gene is ydhP [H]

Identifier: 83593875

GI number: 83593875

Start: 2953394

End: 2954560

Strand: Direct

Name: ydhP [H]

Synonym: Rru_A2540

Alternate gene names: 83593875

Gene position: 2953394-2954560 (Clockwise)

Preceding gene: 83593874

Following gene: 83593877

Centisome position: 67.85

GC content: 64.7

Gene sequence:

>1167_bases
ATGCCCATAGCCGTGGTTGCGCTGACCTTTGCCACTTTTGGTATCTGTACCAGCGAATATGTCATCATGGGCCTGTTGCC
CGAAATCGCCGGCGATCTGGCGATCAGCATTCCCCAGGCCGGGCTTCTGGTTTCGCTTTATGCGCTTGGCGTCGTCGTCG
GCGCCCCGGTTCTGGCGGTGCTCACCACATCCTGGCCCAGGCGCAAAACGCTGATCGGCTTGTCGCTGGTTTTTCTGATC
GGCAATCTTCTCTGCGCCATCGCCCCGACCTATGGGCTGCTGATGATCGCCCGGGTGATCACCGCGCTGTGCCACGGCAC
CTATTTCGGCATCGCCTCGGTGGTGGCGAGTGGATTGGTCGCCCCCGAGCGCCGGGCGCGGGCGATCGCCCTGGTCTTCA
TGGGCGTCACCTTGGCCAATATGCTGGGCGTGCCCTTCGGCACCGCCGTTGGTCAGGCCCTGGGCTGGCGGGCGACCTTC
CTGGGCATTTGCGCCATCAATCTCGTGGCCATCCTCGCCCAGGTCTTGTGGATCCCCAAGGCCCTGCCCACCCGCCCCTC
AAGCCTGGGGGCCGAGTTCCGCAGCCTGATCGATCGTCGGGTGGCGCTGTCGCTGCTGCTGTCGATGCTCAGTTCGGTCA
GCCTGTTCATCGTCTTCACCTATATCACGCCGATCCTGCGCGCCGTGACCGGGGTGTCGCCCCAGGGGGTGACCTATATT
CTGTTGCTCTATGGGGTTGGCCTGTCGATCGGCAGCGTCATCGGCGGCCGCCTGGGCGATCGCAGCCTGATGGGCGCGCT
CGGCTGGTTGATGATCGGACTGACCGCCATTCTGGCCACCTTGCCGTTCACCCTGGGCCTACCGGTCTATGCGGTGGCCA
GCCTGTTCCTGTGGAGCGTGCTGACCTTCGCCATCTGTCCGATGCTTCAAACCCTGGTGATCGATCACGCCAAGGGCGCC
CCCAACCTCGCCTCGACCTTCAATCAAAGCGCCTTCAACCTGGGCAACGCCATCGGCGCCTGGGTTGGCGGCCTGCTGCT
CAACGCCGGCGTCACCCTTGACGCTCTGCCCTTCGCCAGCACCCTTGTCGCCGCCTTCGCCTGCCTGATCATCGTCGTGC
TCAAGGGGGCCGATCGCCGGGCCTTGGTGGTGCCGGCCCAAAGCTAG

Upstream 100 bases:

>100_bases
CCGCCGTCGCCGCCTCCGCACTCCGGCTCCTGAGTCCCCCGCCCGTCCCTCCCCCGCCTGATCGCTTTTTTCAGTGCTTG
TTGCCAAAAAGATCGTCTCG

Downstream 100 bases:

>100_bases
TTACCCCAATCGCCGGGCATAAGCCCGGGTCAGCGGGTCGCCGACAGGGGTAGGGGCGAACAGATCGGCCGGCTCGGCGC
CAACCAGGGCCAGCAGACGC

Product: major facilitator superfamily protein MFS_1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 387

Protein sequence:

>388_residues
MPIAVVALTFATFGICTSEYVIMGLLPEIAGDLAISIPQAGLLVSLYALGVVVGAPVLAVLTTSWPRRKTLIGLSLVFLI
GNLLCAIAPTYGLLMIARVITALCHGTYFGIASVVASGLVAPERRARAIALVFMGVTLANMLGVPFGTAVGQALGWRATF
LGICAINLVAILAQVLWIPKALPTRPSSLGAEFRSLIDRRVALSLLLSMLSSVSLFIVFTYITPILRAVTGVSPQGVTYI
LLLYGVGLSIGSVIGGRLGDRSLMGALGWLMIGLTAILATLPFTLGLPVYAVASLFLWSVLTFAICPMLQTLVIDHAKGA
PNLASTFNQSAFNLGNAIGAWVGGLLLNAGVTLDALPFASTLVAAFACLIIVVLKGADRRALVVPAQS

Sequences:

>Translated_388_residues
MPIAVVALTFATFGICTSEYVIMGLLPEIAGDLAISIPQAGLLVSLYALGVVVGAPVLAVLTTSWPRRKTLIGLSLVFLI
GNLLCAIAPTYGLLMIARVITALCHGTYFGIASVVASGLVAPERRARAIALVFMGVTLANMLGVPFGTAVGQALGWRATF
LGICAINLVAILAQVLWIPKALPTRPSSLGAEFRSLIDRRVALSLLLSMLSSVSLFIVFTYITPILRAVTGVSPQGVTYI
LLLYGVGLSIGSVIGGRLGDRSLMGALGWLMIGLTAILATLPFTLGLPVYAVASLFLWSVLTFAICPMLQTLVIDHAKGA
PNLASTFNQSAFNLGNAIGAWVGGLLLNAGVTLDALPFASTLVAAFACLIIVVLKGADRRALVVPAQS
>Mature_387_residues
PIAVVALTFATFGICTSEYVIMGLLPEIAGDLAISIPQAGLLVSLYALGVVVGAPVLAVLTTSWPRRKTLIGLSLVFLIG
NLLCAIAPTYGLLMIARVITALCHGTYFGIASVVASGLVAPERRARAIALVFMGVTLANMLGVPFGTAVGQALGWRATFL
GICAINLVAILAQVLWIPKALPTRPSSLGAEFRSLIDRRVALSLLLSMLSSVSLFIVFTYITPILRAVTGVSPQGVTYIL
LLYGVGLSIGSVIGGRLGDRSLMGALGWLMIGLTAILATLPFTLGLPVYAVASLFLWSVLTFAICPMLQTLVIDHAKGAP
NLASTFNQSAFNLGNAIGAWVGGLLLNAGVTLDALPFASTLVAAFACLIIVVLKGADRRALVVPAQS

Specific function: Unknown

COG id: COG2814

COG function: function code G; Arabinose efflux permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787947, Length=365, Percent_Identity=41.0958904109589, Blast_Score=243, Evalue=2e-65,
Organism=Escherichia coli, GI1786595, Length=383, Percent_Identity=31.8537859007833, Blast_Score=197, Evalue=1e-51,
Organism=Escherichia coli, GI1787808, Length=261, Percent_Identity=33.7164750957854, Blast_Score=107, Evalue=1e-24,
Organism=Escherichia coli, GI145693198, Length=357, Percent_Identity=26.6106442577031, Blast_Score=94, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 40344; Mature: 40213

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIAVVALTFATFGICTSEYVIMGLLPEIAGDLAISIPQAGLLVSLYALGVVVGAPVLAV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHH
LTTSWPRRKTLIGLSLVFLIGNLLCAIAPTYGLLMIARVITALCHGTYFGIASVVASGLV
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
APERRARAIALVFMGVTLANMLGVPFGTAVGQALGWRATFLGICAINLVAILAQVLWIPK
CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ALPTRPSSLGAEFRSLIDRRVALSLLLSMLSSVSLFIVFTYITPILRAVTGVSPQGVTYI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
LLLYGVGLSIGSVIGGRLGDRSLMGALGWLMIGLTAILATLPFTLGLPVYAVASLFLWSV
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
LTFAICPMLQTLVIDHAKGAPNLASTFNQSAFNLGNAIGAWVGGLLLNAGVTLDALPFAS
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
TLVAAFACLIIVVLKGADRRALVVPAQS
HHHHHHHHHHHHHHCCCCCCEEEECCCC
>Mature Secondary Structure 
PIAVVALTFATFGICTSEYVIMGLLPEIAGDLAISIPQAGLLVSLYALGVVVGAPVLAV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHH
LTTSWPRRKTLIGLSLVFLIGNLLCAIAPTYGLLMIARVITALCHGTYFGIASVVASGLV
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
APERRARAIALVFMGVTLANMLGVPFGTAVGQALGWRATFLGICAINLVAILAQVLWIPK
CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ALPTRPSSLGAEFRSLIDRRVALSLLLSMLSSVSLFIVFTYITPILRAVTGVSPQGVTYI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
LLLYGVGLSIGSVIGGRLGDRSLMGALGWLMIGLTAILATLPFTLGLPVYAVASLFLWSV
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
LTFAICPMLQTLVIDHAKGAPNLASTFNQSAFNLGNAIGAWVGGLLLNAGVTLDALPFAS
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
TLVAAFACLIIVVLKGADRRALVVPAQS
HHHHHHHHHHHHHHCCCCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]