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The map label for this gene is 83593817

Identifier: 83593817

GI number: 83593817

Start: 2884644

End: 2885027

Strand: Direct

Name: 83593817

Synonym: Rru_A2482

Alternate gene names: NA

Gene position: 2884644-2885027 (Clockwise)

Preceding gene: 83593816

Following gene: 83593818

Centisome position: 66.27

GC content: 63.8

Gene sequence:

>384_bases
ATGGGTATTTTGAAGCCAATTCGGACGCCGGCGGACCACGCCGCCGCTCTTGCCCGCCTTGAGGCCTTGATGGACGCGGA
GCCCGGAACAGCCGAAGGGGAAGACCTCGATGTCCTTGCCGACCTGATCGAGCATTACGAATCCAAGCAGGTTCCGATCG
GCTATCCCCCCCCTCATGCCGCCATCGCCTTTCGAATGGAGCAAGCCGGCCTGTCGCCCCAGGACCTTGTTCCGCTTATC
GGCAGTCAGGCCGAAGTTCTGGAGGTTTTGGCGGGAACGCGCCCCCTCACCCTGGCGATGGCCCGGGCGCTTCATATCCA
CTTGGGCATCCCGGCCGAAGTTTTGCTTCAGCAGCAGGAGGAGCGACCGGCCCTCGCCCCCTGA

Upstream 100 bases:

>100_bases
CGACTTGTTGTAAAAATAAATTACGCTTATCGCATTGTCTATATTTGGTTTATTGGAACCCATGCCGAATACGACGAGAT
CAATGTCGAAGAGGTGTAAA

Downstream 100 bases:

>100_bases
CGCGAGAGGAGGATGCGAGGCCGGGCACATCGGCTTCCCTCATGGCGTTTGACACGGTTTCCTTCGCGCGCCTTTGCCCC
CACAGTGGGGCTCTCGTCTA

Product: transcription regulator

Products: NA

Alternate protein names: Transcription Regulator With HTH Domain; Helix-Turn-Helix Domain-Containing Protein; Transcription Regulator; Transcriptional Regulator XRE Family; Transcription Regulator With HTH Domain Protein; XRE Family Transcriptional Regulator; Helix-Turn-Helix Domain Protein; Transcription Regulator Containing HTH Domain; Transcriptional Regulator Xre Family; Transcritional Regulatior Protein; Transcription Regulator Containing Helix Turn Helix Domain; HTH_3 Family Transcriptional Regulator Protein; HTH-Type Transcriptional Regulator YgjM; Transcription Regulator Protein; Transcriptional Regulator Protein

Number of amino acids: Translated: 127; Mature: 126

Protein sequence:

>127_residues
MGILKPIRTPADHAAALARLEALMDAEPGTAEGEDLDVLADLIEHYESKQVPIGYPPPHAAIAFRMEQAGLSPQDLVPLI
GSQAEVLEVLAGTRPLTLAMARALHIHLGIPAEVLLQQQEERPALAP

Sequences:

>Translated_127_residues
MGILKPIRTPADHAAALARLEALMDAEPGTAEGEDLDVLADLIEHYESKQVPIGYPPPHAAIAFRMEQAGLSPQDLVPLI
GSQAEVLEVLAGTRPLTLAMARALHIHLGIPAEVLLQQQEERPALAP
>Mature_126_residues
GILKPIRTPADHAAALARLEALMDAEPGTAEGEDLDVLADLIEHYESKQVPIGYPPPHAAIAFRMEQAGLSPQDLVPLIG
SQAEVLEVLAGTRPLTLAMARALHIHLGIPAEVLLQQQEERPALAP

Specific function: Unknown

COG id: COG5499

COG function: function code K; Predicted transcription regulator containing HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13560; Mature: 13429

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGILKPIRTPADHAAALARLEALMDAEPGTAEGEDLDVLADLIEHYESKQVPIGYPPPHA
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCH
AIAFRMEQAGLSPQDLVPLIGSQAEVLEVLAGTRPLTLAMARALHIHLGIPAEVLLQQQE
HHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHH
ERPALAP
CCCCCCC
>Mature Secondary Structure 
GILKPIRTPADHAAALARLEALMDAEPGTAEGEDLDVLADLIEHYESKQVPIGYPPPHA
CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCH
AIAFRMEQAGLSPQDLVPLIGSQAEVLEVLAGTRPLTLAMARALHIHLGIPAEVLLQQQE
HHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHH
ERPALAP
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA