| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is feoB [H]
Identifier: 83593805
GI number: 83593805
Start: 2867984
End: 2870344
Strand: Direct
Name: feoB [H]
Synonym: Rru_A2470
Alternate gene names: 83593805
Gene position: 2867984-2870344 (Clockwise)
Preceding gene: 83593804
Following gene: 83593806
Centisome position: 65.89
GC content: 66.16
Gene sequence:
>2361_bases ATGAGCGCTTCCGTCGTTTGCGTCGTCGGCAATCCCAATTGCGGCAAGACGACCCTGTTCAACGCCCTGACCGGAGGACG CCAAAGCGTCGGCAACTGGCCGGGCGTCACCGTTGAGAAAAAGGTCGGCGCCTACCGCCACGGCGGCGAAGCCGTGACCA TCGTCGATTTGCCCGGCGTCTATTCGCTGACGCCGACTTCGTCGTCGTCCGAGGACGAGCGGGTGGCCCGCGATTACATC CTGTCGGGGGAAGCCGGCCTCGTCCTTAACATCGTCGATGCCTCCAACCTGGAACGAAACCTCTATCTGACCGCCCAGTT GCTGGAAATGCGGGTGCCGATGGTGGTCATCGTCAACATGATGGACATCGCCGCCTCGCGCCACCTTGATATCGACATCG ACGCGCTGTCCAAATCGCTCGACTGCAAGGTGGTGCCGATGGTGGCCAGCCGCCGCCGCGGCCTTGACGATCTGCGCGAG GTTATCGCCCAATCGATGGGACGAACCACCCCGCCGGCCGCCTCGGCCCCCTATCCGCCGGCGGTGAGCGAGGCGGTCGG CAGGATCGCCGCCACCCTGCCCGCCGATAGCCGCGCCGACCGGCGGTGGACGGCGTTGCAGCTTCTTGAAGGCGATTCCA CCTTGCTGCGCGACCTGCCCCCGGCGACGGCCCTGGCCCTGGAGAGCGACCTCAAACAGGCGGCGCAAAGCGGAACCGAA GACTTCGATATCCTGATCGCCGATGCCCGCTATGGCTTCGTCGGCGCCATCGCGCTCGGCGCCGTGATCCGCAAGGGCCA GATGTCGCGCACCCTGACCGACCGCATCGACAAGGTGGTGCTGCACCGGGTGCTGGGCATCCCGATCTTCCTGGCGATGA TGTATCTGATGTTCGTCTTCACCATCAATGTCGGCGGCGCCTTCATCGATTTCTTCGACCAGTTCGCCGGCACCTTGTTC GTTGACGGCTTTGGCCATCTGCTGGGCGGCGCCGGCGCCCCCGACTGGCTAACCGCGCTGCTGGCCAAGGGCGTTGGCGG CGGCGTGCAGACGGTCGCCACCTTCATTCCCGTCATCGGCTTTCTGTACCTGTTTTTGTCGGTTCTCGAAGACTCGGGTT ATATGGCCCGCGCCGCCTTCGTCATGGACCGCTTCATGCGCGGCATCGGCCTGCCCGGCAAGGCCTTCGTGCCGCTGATC GTCGGCTTTGGCTGCAATGTGCCCGCCGTGATGGCCACCCGCACCATGGACAGCCGGCGCGACCGACTGATCACGGTGAT GATGGCCCCCTTCATGTCCTGCGGCGCCCGTTTGCCGGTCTATGTGCTGTTCGCCGCCGCCTTCTTCCCCTCGGGCGGCC AGAACCTGGTTTTCGCGCTCTATCTGATCGGCATCCTGGTCGCCATCGCCACCGGCCTGTTGCTCAAGACCACCGCCCTG CGCGGCGAGGCCTCGCCCTTTGTCATGGAGATGCCGCCCTACCACTTGCCCACCGTTGCGGGCATCCTGCTGCGCACCTG GGATCGCCTGAAAAGCTTCATCCTGCGCGCCGGCAAGCTGGTGGTCGCCGTGGTCGTCGTCCTCAGCTTCCTCAATTCCT GGGGCACCGACGGCAGCTTCGGCAATGAGGACACCGATAAGTCCGTCCTCGCCGCGATCGGCAAGGCGATCGTTCCGGTC TTCGCGCCGATGGGCATTTCCGAAGAGAACTGGCCGGCCACCGTTGGCGTCTTCACCGGCATCTTCGCCAAGGAAGCCGT CGTCGGCACCCTGGATGCGCTTTATGGCACCATCGCCGAAGGCAATGCCGCCGCCGCCCAAGCCGAGGCCGATCCGGAGG CCGCCGCCACCGAAGAGCCCGAGGCTTTCGATCTGTGGGGCGGATTGGCCGGCGCCTTCGCCACCATTCCCGCCAATCTG AGCAATGTCGCCGGCGCCCTGGCCGATCCGCTTGGCATCGAGGTCGGCGATCTCAGCGACCGCTCGGCCGTGGCCGCCGA TCAGGAGATTTCAACCTCGTCGATCGATGCCATCGCCCTGCTGTTCGATGGGGCGATCGGCGCCTTCGCCTATCTGCTGA TGGTGCTGCTCTATATGCCCTGCGTCGCCGCCGTCTCGGCCATCTGGCGCGAAGTCGGCACCCGCTGGACGCTGTTCGCC GCCGCCTGGACCACCGGCATGGGCTATGGGGCCGCCGTGCTGACCTATCAGATCGGCACCTTCTCGCGCCATCCCGTCAG CTCGGCGGTGGATATCGCCGTGGTGCTGGCGGTGCTGGCGGCGGCAATCGCCCTGCTCCGTCTGGCCGGGCGGGGAAGCG CCGAGGCCGGGCCGATCAGCGCCGGCCAAACGGCATCGTGA
Upstream 100 bases:
>100_bases CGCGGCCGACCTCGCCTGACCCGATCGCGCACCGGGGGCCCCTTCCCGGGCCCCTTGTCCCGACCCCGCATCCTGGCCCC GTGTCCTGGAGAGACCACCT
Downstream 100 bases:
>100_bases TCGCCCTTCCCCCTTCTCCTTGGATCCTCTTCCCGCCAGCAAACGCGGGGAGAGGGGAGCTTGACCGATGATCCTGACCG AGCTTGGAAGCTACGTTCAA
Product: ferrous iron transport protein B
Products: Fe (II) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 786; Mature: 785
Protein sequence:
>786_residues MSASVVCVVGNPNCGKTTLFNALTGGRQSVGNWPGVTVEKKVGAYRHGGEAVTIVDLPGVYSLTPTSSSSEDERVARDYI LSGEAGLVLNIVDASNLERNLYLTAQLLEMRVPMVVIVNMMDIAASRHLDIDIDALSKSLDCKVVPMVASRRRGLDDLRE VIAQSMGRTTPPAASAPYPPAVSEAVGRIAATLPADSRADRRWTALQLLEGDSTLLRDLPPATALALESDLKQAAQSGTE DFDILIADARYGFVGAIALGAVIRKGQMSRTLTDRIDKVVLHRVLGIPIFLAMMYLMFVFTINVGGAFIDFFDQFAGTLF VDGFGHLLGGAGAPDWLTALLAKGVGGGVQTVATFIPVIGFLYLFLSVLEDSGYMARAAFVMDRFMRGIGLPGKAFVPLI VGFGCNVPAVMATRTMDSRRDRLITVMMAPFMSCGARLPVYVLFAAAFFPSGGQNLVFALYLIGILVAIATGLLLKTTAL RGEASPFVMEMPPYHLPTVAGILLRTWDRLKSFILRAGKLVVAVVVVLSFLNSWGTDGSFGNEDTDKSVLAAIGKAIVPV FAPMGISEENWPATVGVFTGIFAKEAVVGTLDALYGTIAEGNAAAAQAEADPEAAATEEPEAFDLWGGLAGAFATIPANL SNVAGALADPLGIEVGDLSDRSAVAADQEISTSSIDAIALLFDGAIGAFAYLLMVLLYMPCVAAVSAIWREVGTRWTLFA AAWTTGMGYGAAVLTYQIGTFSRHPVSSAVDIAVVLAVLAAAIALLRLAGRGSAEAGPISAGQTAS
Sequences:
>Translated_786_residues MSASVVCVVGNPNCGKTTLFNALTGGRQSVGNWPGVTVEKKVGAYRHGGEAVTIVDLPGVYSLTPTSSSSEDERVARDYI LSGEAGLVLNIVDASNLERNLYLTAQLLEMRVPMVVIVNMMDIAASRHLDIDIDALSKSLDCKVVPMVASRRRGLDDLRE VIAQSMGRTTPPAASAPYPPAVSEAVGRIAATLPADSRADRRWTALQLLEGDSTLLRDLPPATALALESDLKQAAQSGTE DFDILIADARYGFVGAIALGAVIRKGQMSRTLTDRIDKVVLHRVLGIPIFLAMMYLMFVFTINVGGAFIDFFDQFAGTLF VDGFGHLLGGAGAPDWLTALLAKGVGGGVQTVATFIPVIGFLYLFLSVLEDSGYMARAAFVMDRFMRGIGLPGKAFVPLI VGFGCNVPAVMATRTMDSRRDRLITVMMAPFMSCGARLPVYVLFAAAFFPSGGQNLVFALYLIGILVAIATGLLLKTTAL RGEASPFVMEMPPYHLPTVAGILLRTWDRLKSFILRAGKLVVAVVVVLSFLNSWGTDGSFGNEDTDKSVLAAIGKAIVPV FAPMGISEENWPATVGVFTGIFAKEAVVGTLDALYGTIAEGNAAAAQAEADPEAAATEEPEAFDLWGGLAGAFATIPANL SNVAGALADPLGIEVGDLSDRSAVAADQEISTSSIDAIALLFDGAIGAFAYLLMVLLYMPCVAAVSAIWREVGTRWTLFA AAWTTGMGYGAAVLTYQIGTFSRHPVSSAVDIAVVLAVLAAAIALLRLAGRGSAEAGPISAGQTAS >Mature_785_residues SASVVCVVGNPNCGKTTLFNALTGGRQSVGNWPGVTVEKKVGAYRHGGEAVTIVDLPGVYSLTPTSSSSEDERVARDYIL SGEAGLVLNIVDASNLERNLYLTAQLLEMRVPMVVIVNMMDIAASRHLDIDIDALSKSLDCKVVPMVASRRRGLDDLREV IAQSMGRTTPPAASAPYPPAVSEAVGRIAATLPADSRADRRWTALQLLEGDSTLLRDLPPATALALESDLKQAAQSGTED FDILIADARYGFVGAIALGAVIRKGQMSRTLTDRIDKVVLHRVLGIPIFLAMMYLMFVFTINVGGAFIDFFDQFAGTLFV DGFGHLLGGAGAPDWLTALLAKGVGGGVQTVATFIPVIGFLYLFLSVLEDSGYMARAAFVMDRFMRGIGLPGKAFVPLIV GFGCNVPAVMATRTMDSRRDRLITVMMAPFMSCGARLPVYVLFAAAFFPSGGQNLVFALYLIGILVAIATGLLLKTTALR GEASPFVMEMPPYHLPTVAGILLRTWDRLKSFILRAGKLVVAVVVVLSFLNSWGTDGSFGNEDTDKSVLAAIGKAIVPVF APMGISEENWPATVGVFTGIFAKEAVVGTLDALYGTIAEGNAAAAQAEADPEAAATEEPEAFDLWGGLAGAFATIPANLS NVAGALADPLGIEVGDLSDRSAVAADQEISTSSIDAIALLFDGAIGAFAYLLMVLLYMPCVAAVSAIWREVGTRWTLFAA AWTTGMGYGAAVLTYQIGTFSRHPVSSAVDIAVVLAVLAAAIALLRLAGRGSAEAGPISAGQTAS
Specific function: Fe(2+) uptake system, probably driven by GTP [H]
COG id: COG0370
COG function: function code P; Fe2+ transport system protein B
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the feoB (TC 9.A.8) family [H]
Homologues:
Organism=Escherichia coli, GI1789813, Length=772, Percent_Identity=45.7253886010363, Blast_Score=612, Evalue=1e-176,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003373 - InterPro: IPR011640 - InterPro: IPR011619 - InterPro: IPR011642 - InterPro: IPR006073 [H]
Pfam domain/function: PF07664 FeoB_C; PF02421 FeoB_N; PF07670 Gate [H]
EC number: NA
Molecular weight: Translated: 82582; Mature: 82450
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSASVVCVVGNPNCGKTTLFNALTGGRQSVGNWPGVTVEKKVGAYRHGGEAVTIVDLPGV CCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCEEEHHCCCCCCCCCEEEEEECCCC YSLTPTSSSSEDERVARDYILSGEAGLVLNIVDASNLERNLYLTAQLLEMRVPMVVIVNM EEECCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHH MDIAASRHLDIDIDALSKSLDCKVVPMVASRRRGLDDLREVIAQSMGRTTPPAASAPYPP HHHHHCCCCCEEHHHHCCCCCCEEEHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCC AVSEAVGRIAATLPADSRADRRWTALQLLEGDSTLLRDLPPATALALESDLKQAAQSGTE HHHHHHHHHHHCCCCCCCCCCHHHHHEEECCCHHHHHHCCCHHHHHHHHHHHHHHHCCCC DFDILIADARYGFVGAIALGAVIRKGQMSRTLTDRIDKVVLHRVLGIPIFLAMMYLMFVF CEEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TINVGGAFIDFFDQFAGTLFVDGFGHLLGGAGAPDWLTALLAKGVGGGVQTVATFIPVIG HHHCCHHHHHHHHHHHHHEEECCHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHH FLYLFLSVLEDSGYMARAAFVMDRFMRGIGLPGKAFVPLIVGFGCNVPAVMATRTMDSRR HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHH DRLITVMMAPFMSCGARLPVYVLFAAAFFPSGGQNLVFALYLIGILVAIATGLLLKTTAL HHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH RGEASPFVMEMPPYHLPTVAGILLRTWDRLKSFILRAGKLVVAVVVVLSFLNSWGTDGSF CCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GNEDTDKSVLAAIGKAIVPVFAPMGISEENWPATVGVFTGIFAKEAVVGTLDALYGTIAE CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC GNAAAAQAEADPEAAATEEPEAFDLWGGLAGAFATIPANLSNVAGALADPLGIEVGDLSD CCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEECCCCC RSAVAADQEISTSSIDAIALLFDGAIGAFAYLLMVLLYMPCVAAVSAIWREVGTRWTLFA CHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEH AAWTTGMGYGAAVLTYQIGTFSRHPVSSAVDIAVVLAVLAAAIALLRLAGRGSAEAGPIS HHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC AGQTAS CCCCCC >Mature Secondary Structure SASVVCVVGNPNCGKTTLFNALTGGRQSVGNWPGVTVEKKVGAYRHGGEAVTIVDLPGV CCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCEEEHHCCCCCCCCCEEEEEECCCC YSLTPTSSSSEDERVARDYILSGEAGLVLNIVDASNLERNLYLTAQLLEMRVPMVVIVNM EEECCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHH MDIAASRHLDIDIDALSKSLDCKVVPMVASRRRGLDDLREVIAQSMGRTTPPAASAPYPP HHHHHCCCCCEEHHHHCCCCCCEEEHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCC AVSEAVGRIAATLPADSRADRRWTALQLLEGDSTLLRDLPPATALALESDLKQAAQSGTE HHHHHHHHHHHCCCCCCCCCCHHHHHEEECCCHHHHHHCCCHHHHHHHHHHHHHHHCCCC DFDILIADARYGFVGAIALGAVIRKGQMSRTLTDRIDKVVLHRVLGIPIFLAMMYLMFVF CEEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TINVGGAFIDFFDQFAGTLFVDGFGHLLGGAGAPDWLTALLAKGVGGGVQTVATFIPVIG HHHCCHHHHHHHHHHHHHEEECCHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHH FLYLFLSVLEDSGYMARAAFVMDRFMRGIGLPGKAFVPLIVGFGCNVPAVMATRTMDSRR HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHH DRLITVMMAPFMSCGARLPVYVLFAAAFFPSGGQNLVFALYLIGILVAIATGLLLKTTAL HHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH RGEASPFVMEMPPYHLPTVAGILLRTWDRLKSFILRAGKLVVAVVVVLSFLNSWGTDGSF CCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GNEDTDKSVLAAIGKAIVPVFAPMGISEENWPATVGVFTGIFAKEAVVGTLDALYGTIAE CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC GNAAAAQAEADPEAAATEEPEAFDLWGGLAGAFATIPANLSNVAGALADPLGIEVGDLSD CCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEECCCCC RSAVAADQEISTSSIDAIALLFDGAIGAFAYLLMVLLYMPCVAAVSAIWREVGTRWTLFA CHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEH AAWTTGMGYGAAVLTYQIGTFSRHPVSSAVDIAVVLAVLAAAIALLRLAGRGSAEAGPIS HHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC AGQTAS CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Fe (II) [Periplasm] [C]
Specific reaction: Fe (II) [Periplasm] = Fe (II) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA