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The map label for this gene is yohK [H]

Identifier: 83593762

GI number: 83593762

Start: 2827107

End: 2827832

Strand: Direct

Name: yohK [H]

Synonym: Rru_A2427

Alternate gene names: 83593762

Gene position: 2827107-2827832 (Clockwise)

Preceding gene: 83593761

Following gene: 83593763

Centisome position: 64.95

GC content: 66.25

Gene sequence:

>726_bases
ATGAACGGCCTTCCCGGCGAAATCCACGACCTGTGGGTCTATCTGCACGCGACGCCGCTGTTCTGGCTGACCGTCACCTT
GCTCGCCTATCTGATCGGGCTGGGGCTGCACAGCGTCGCCCGCCTCAATCCGCTGGTCAATCCGGTGGCCATCGCCGTTT
TGTTGCTTGTCGGCCTGCTGAAGATCACCGGAACGGACTATCACGACTATTTCTCCGGGGCCCAGTTCGTTCACTTTCTG
CTCGGTCCGGCGACGGTGGCGCTGGCCGTTCCGCTGTTTGAAAACATCGGCAAGGTGCGTCAGGCGCTGATCCCGATGGG
GATCGCCCTGGTCGTCGGCTCGACGGTGGCGGCGGGTTCGGCGATGGGGCTGGCCGCCCTGACCGGCGCCACGCCCGAGG
TGTTGCTGTCGATGGCGCCGAAATCGGCGACGACACCGATCGCCATGGGCATCAGCGAGAGCATTGGCGGCCTGCCCGAA
CTGACGGCGGTGATGGTGATCCTGACCGGCGTGCTGGGCGCGGTGATCGTCACCCCTTTGATGACTCTCCTTGGCATCAA
GGATATGCGGGCGCGGGGCTTCGCCGCCGGGGTCGCCGCCCATGGCCTGGGCACGGCGCGCGCCTTCCAGGTCGACCCGC
TGGCCGGCACCTTCGCCGGCATCGGCATGGGCATGAACGGCCTGATGACCACCCTGGTGGTCGCGGTGCTGGTGGGATTC
TTCTAG

Upstream 100 bases:

>100_bases
TGTTTGGCAGTACCGCCCTGGCCCTGATCGCCACCGCCCTGACCTTCCGCGCCGTCTGCAAGATCATGGAGCGCTCGAAG
GCCAAGAAGGAGGGCGGGCG

Downstream 100 bases:

>100_bases
CAGAACTTGCGCCCAGACCGACGGATGGCGCACAGTTTCGCCATGACGGCCGGTTACTCAGATCGTCCTTTTCCCAAAGC
CAAGGATTTCGCCGCCGATG

Product: LrgB-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MNGLPGEIHDLWVYLHATPLFWLTVTLLAYLIGLGLHSVARLNPLVNPVAIAVLLLVGLLKITGTDYHDYFSGAQFVHFL
LGPATVALAVPLFENIGKVRQALIPMGIALVVGSTVAAGSAMGLAALTGATPEVLLSMAPKSATTPIAMGISESIGGLPE
LTAVMVILTGVLGAVIVTPLMTLLGIKDMRARGFAAGVAAHGLGTARAFQVDPLAGTFAGIGMGMNGLMTTLVVAVLVGF
F

Sequences:

>Translated_241_residues
MNGLPGEIHDLWVYLHATPLFWLTVTLLAYLIGLGLHSVARLNPLVNPVAIAVLLLVGLLKITGTDYHDYFSGAQFVHFL
LGPATVALAVPLFENIGKVRQALIPMGIALVVGSTVAAGSAMGLAALTGATPEVLLSMAPKSATTPIAMGISESIGGLPE
LTAVMVILTGVLGAVIVTPLMTLLGIKDMRARGFAAGVAAHGLGTARAFQVDPLAGTFAGIGMGMNGLMTTLVVAVLVGF
F
>Mature_241_residues
MNGLPGEIHDLWVYLHATPLFWLTVTLLAYLIGLGLHSVARLNPLVNPVAIAVLLLVGLLKITGTDYHDYFSGAQFVHFL
LGPATVALAVPLFENIGKVRQALIPMGIALVVGSTVAAGSAMGLAALTGATPEVLLSMAPKSATTPIAMGISESIGGLPE
LTAVMVILTGVLGAVIVTPLMTLLGIKDMRARGFAAGVAAHGLGTARAFQVDPLAGTFAGIGMGMNGLMTTLVVAVLVGF
F

Specific function: Unknown

COG id: COG1346

COG function: function code M; Putative effector of murein hydrolase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yohK (E.coli)/ywbG (IPA-22R) (B.subtilis) family [H]

Homologues:

Organism=Escherichia coli, GI1788464, Length=215, Percent_Identity=38.6046511627907, Blast_Score=149, Evalue=1e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005261
- InterPro:   IPR007300 [H]

Pfam domain/function: PF04172 LrgB [H]

EC number: NA

Molecular weight: Translated: 24692; Mature: 24692

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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C
>Mature Secondary Structure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C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503; 2575702 [H]