Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
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Accession | NC_007643 |
Length | 4,352,825 |
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The map label for this gene is fhuA [H]
Identifier: 83593709
GI number: 83593709
Start: 2766206
End: 2768674
Strand: Direct
Name: fhuA [H]
Synonym: Rru_A2374
Alternate gene names: 83593709
Gene position: 2766206-2768674 (Clockwise)
Preceding gene: 83593708
Following gene: 83593710
Centisome position: 63.55
GC content: 63.47
Gene sequence:
>2469_bases ATGACGATCGGTTTGGGGGCGGCGCGGCGCGGGACCACGATGACGGGGCGCAGGGGCGCGCGCCCGCTGGCCTCGCTTTT GGCTTCGACCATCCTGGGCTGGTCCCTTGCGTCGCCGGCCTCCGAGGTCTGGGCCCAGCAGCCGCAAGCCATCGATCAGC ACGCGATCCGTTTCCAGATCCCGGCTCAGCCGCTGGCCTCGGCCATCGACGCCTTCATCGACCAAAGCGGTTGGCAGATC AGCTATTCGACCGCCGTCGCGCGCGACAAGACCTCGAGCGCCGTCGCCGGCGAGATGACGCCCGCCGAGGCTTTGCGCCG CCTTGTCAGCGGCACGGGCCTTGCGGTCCGCCTCACCGGAGCGGACGCCGCCGCCCTTTTTGATCCTCTGCCCCAGGGCG ACGACCAGAAGACCGGCGCCCTCACCCTTGACACCCTCACCGTGGAAGGTGCTGGCATCGATCCCGGCGTCGGCCTGGGC GGCGGGGTGGTGACACGGGGCTATGTCGCCGAAGCCGCCCGCATCGGCACCAAGACCGATACGGACCTGAAAAAGGTCCC CCAATCCATCGCCGTGGTGTCACGCCAGGAGTTGGAAGACCGCGACGCGCAAAGCTTGGTAGAGGCGGTTGGCTATTCCT CGGGCGTGCGAACCGGCGTCTATGGCTTCGATCCCCGCTTCGATACCATCCACGTGCGCGGCTTCAATGTGTCGAGCGAA GGGTTCTATCGCGATGGCCTGCGCGACCTGGGCGGCAGTTTCTCGGTGTTCCGCAAGGAACCCTATGGCTTCGAGGCGGT CAGCGTTCTCAAGGGGCCAAGCTCGACGCTGTATGGCGGCGGGTCGCCCGGCGGCATCATCGACGTGGTATCCAAGCGCC CAACGGAACAGGCCTTTAACGAAATCGAGATTCAGGCGGGCACCCGCGATCATCGACAGATCAACCTCGATACCTCCGGC CCCGTCCTTGAAAACGATACCGTCCTTTATCGCCTGACCGGGTTGTACCGCGAGGCCGACACCCAATACCTCGCCGCCCC CAACGACCGGTTCTATGTCGCCCCCGCCGTCACCTTGCGCTCGGATGACCGCGATACCCACCTCACCTTGCTCACCGAAT ACACCGATCTGACCACCGGGGGCGCGGCGGGCTATTACACCTCGCCGGATCTGAAAACCCGCATAGAAACCGGTGATCCG GCTTGGGGCGATTTCGATCAGATGCAGTGGCGGGTCGGATACGAGTTCGAACACCGCTTCAACGACGTCCTCGCCCTCCG CCAGAACATGCGCTATTCGAACATCAAGGCGGATATGCGCTGGACCGGCATCAACGATATTTCCGACGATGGCGCCACCG CCACCCGCAGCACCGGGCGGATCCGCGACGAGGCCTGGACCATCGGCGTCGATACCCATGCCCAGGCCGATTTCGCCACT GGCCCGCTCTCCCATACCGTTCTTGGCGGCGTGGATGTCAGCTACATCGACAGCGATTACAAATACGGGGCGGGAACCGC GCCCGACCTGAACCTGATCACCGGCAATTATGGCCAACAAGCGATCGAGGGACCGGCGACGCTTGACCTCATCCGCAATA CCGTCCGCCAGCGGCAGACGGGCCTCTACCTTCAAGATCAGATCGAAATCGACCGGGTGGTTCTGACCTTTGGCGGGCGT TACGACTGGCTGAGAAGCCAAGCCAAGAACCGGCTCGATCTTTCAAGCAGTACCGAGCACTACGACGATAACTTCTCCTA TCGGGTTGGGCTGACCTATCTTTTCGACAATGGCATCAGCCCCTATGTCAGCTACGCCACGTCTTTCGCCCCGACCACCG GAACAAGCGCCAGCGGCGCGGCCTTTGAACCGACCACGGGCGAACAGGTCGAGGTCGGCGTCAAATACATCCCCGACAGC CTGCCGCTTTCGATCAATGCCGCGCTGTTCAAGATCCGTCAGGAAAACGTCCTGGCCTCCGACCCCGATAATGTCTACTT CCAGATCCAGCGCGGCGAGGTCGAATCCACCGGCTTCGAGATCCAGGCGACGACCCGTCCGATCGACGGCCTCGATCTCA CCGCCTCCTATACCTACCTCGACATGGAAATCGCCGCCGGCGACAACGCGGGCAAGATCCCCTCGGGCATCCCCCATCAC CAGATCACCGCCTGGGCCAATTACGTGTTTCAAAGCGGCTTGGCCAAGGGGCTGACGCTGGGCGCGGGTAGCCGCTTCTA TGGCGAAAGCTGGGGCAATGATACCAACACGGTGAAGAACGACGCCCGCGTGCTGGTCGATGCCGCCATCGGCTATGATT TCAGCGCCCTCAGCCCGCAATTGCGCGGCGTCTCCGCCCAGATCAACGGCAAGAACCTCTTCGACAACCGCGCGGTTACC TTCGCCTCCAACCTGAGCTACCGCGAGGAAGGACGCGAGGTCGTCGGGTCGCTGCGCTACCGGTTCTAA
Upstream 100 bases:
>100_bases ATTTTCCGACCTGCCGGCCCTTCGACGTCTTGCTAGCGAGGGCGAGGGGGTCGCATGGGGCGATCCCTTCCCCCTTGGGA TGACAAGAAGGGATGCGAGC
Downstream 100 bases:
>100_bases GCGATGGCGAGACGATGCGCTTTGATTTAGGCTGGGGTTTTATGTCGCGTAATGCAGGAGATGCCGTCGATGAGCCGCCA GTTCGCGGGCCGGGCGTTTA
Product: TonB-dependent siderophore receptor
Products: NA
Alternate protein names: Ferric hydroxamate receptor; Ferric hydroxamate uptake [H]
Number of amino acids: Translated: 822; Mature: 821
Protein sequence:
>822_residues MTIGLGAARRGTTMTGRRGARPLASLLASTILGWSLASPASEVWAQQPQAIDQHAIRFQIPAQPLASAIDAFIDQSGWQI SYSTAVARDKTSSAVAGEMTPAEALRRLVSGTGLAVRLTGADAAALFDPLPQGDDQKTGALTLDTLTVEGAGIDPGVGLG GGVVTRGYVAEAARIGTKTDTDLKKVPQSIAVVSRQELEDRDAQSLVEAVGYSSGVRTGVYGFDPRFDTIHVRGFNVSSE GFYRDGLRDLGGSFSVFRKEPYGFEAVSVLKGPSSTLYGGGSPGGIIDVVSKRPTEQAFNEIEIQAGTRDHRQINLDTSG PVLENDTVLYRLTGLYREADTQYLAAPNDRFYVAPAVTLRSDDRDTHLTLLTEYTDLTTGGAAGYYTSPDLKTRIETGDP AWGDFDQMQWRVGYEFEHRFNDVLALRQNMRYSNIKADMRWTGINDISDDGATATRSTGRIRDEAWTIGVDTHAQADFAT GPLSHTVLGGVDVSYIDSDYKYGAGTAPDLNLITGNYGQQAIEGPATLDLIRNTVRQRQTGLYLQDQIEIDRVVLTFGGR YDWLRSQAKNRLDLSSSTEHYDDNFSYRVGLTYLFDNGISPYVSYATSFAPTTGTSASGAAFEPTTGEQVEVGVKYIPDS LPLSINAALFKIRQENVLASDPDNVYFQIQRGEVESTGFEIQATTRPIDGLDLTASYTYLDMEIAAGDNAGKIPSGIPHH QITAWANYVFQSGLAKGLTLGAGSRFYGESWGNDTNTVKNDARVLVDAAIGYDFSALSPQLRGVSAQINGKNLFDNRAVT FASNLSYREEGREVVGSLRYRF
Sequences:
>Translated_822_residues MTIGLGAARRGTTMTGRRGARPLASLLASTILGWSLASPASEVWAQQPQAIDQHAIRFQIPAQPLASAIDAFIDQSGWQI SYSTAVARDKTSSAVAGEMTPAEALRRLVSGTGLAVRLTGADAAALFDPLPQGDDQKTGALTLDTLTVEGAGIDPGVGLG GGVVTRGYVAEAARIGTKTDTDLKKVPQSIAVVSRQELEDRDAQSLVEAVGYSSGVRTGVYGFDPRFDTIHVRGFNVSSE GFYRDGLRDLGGSFSVFRKEPYGFEAVSVLKGPSSTLYGGGSPGGIIDVVSKRPTEQAFNEIEIQAGTRDHRQINLDTSG PVLENDTVLYRLTGLYREADTQYLAAPNDRFYVAPAVTLRSDDRDTHLTLLTEYTDLTTGGAAGYYTSPDLKTRIETGDP AWGDFDQMQWRVGYEFEHRFNDVLALRQNMRYSNIKADMRWTGINDISDDGATATRSTGRIRDEAWTIGVDTHAQADFAT GPLSHTVLGGVDVSYIDSDYKYGAGTAPDLNLITGNYGQQAIEGPATLDLIRNTVRQRQTGLYLQDQIEIDRVVLTFGGR YDWLRSQAKNRLDLSSSTEHYDDNFSYRVGLTYLFDNGISPYVSYATSFAPTTGTSASGAAFEPTTGEQVEVGVKYIPDS LPLSINAALFKIRQENVLASDPDNVYFQIQRGEVESTGFEIQATTRPIDGLDLTASYTYLDMEIAAGDNAGKIPSGIPHH QITAWANYVFQSGLAKGLTLGAGSRFYGESWGNDTNTVKNDARVLVDAAIGYDFSALSPQLRGVSAQINGKNLFDNRAVT FASNLSYREEGREVVGSLRYRF >Mature_821_residues TIGLGAARRGTTMTGRRGARPLASLLASTILGWSLASPASEVWAQQPQAIDQHAIRFQIPAQPLASAIDAFIDQSGWQIS YSTAVARDKTSSAVAGEMTPAEALRRLVSGTGLAVRLTGADAAALFDPLPQGDDQKTGALTLDTLTVEGAGIDPGVGLGG GVVTRGYVAEAARIGTKTDTDLKKVPQSIAVVSRQELEDRDAQSLVEAVGYSSGVRTGVYGFDPRFDTIHVRGFNVSSEG FYRDGLRDLGGSFSVFRKEPYGFEAVSVLKGPSSTLYGGGSPGGIIDVVSKRPTEQAFNEIEIQAGTRDHRQINLDTSGP VLENDTVLYRLTGLYREADTQYLAAPNDRFYVAPAVTLRSDDRDTHLTLLTEYTDLTTGGAAGYYTSPDLKTRIETGDPA WGDFDQMQWRVGYEFEHRFNDVLALRQNMRYSNIKADMRWTGINDISDDGATATRSTGRIRDEAWTIGVDTHAQADFATG PLSHTVLGGVDVSYIDSDYKYGAGTAPDLNLITGNYGQQAIEGPATLDLIRNTVRQRQTGLYLQDQIEIDRVVLTFGGRY DWLRSQAKNRLDLSSSTEHYDDNFSYRVGLTYLFDNGISPYVSYATSFAPTTGTSASGAAFEPTTGEQVEVGVKYIPDSL PLSINAALFKIRQENVLASDPDNVYFQIQRGEVESTGFEIQATTRPIDGLDLTASYTYLDMEIAAGDNAGKIPSGIPHHQ ITAWANYVFQSGLAKGLTLGAGSRFYGESWGNDTNTVKNDARVLVDAAIGYDFSALSPQLRGVSAQINGKNLFDNRAVTF ASNLSYREEGREVVGSLRYRF
Specific function: This receptor binds the ferrichrome-iron ligand. It interacts with the tonB protein, which is responsible for energy coupling of the ferrichrome-promoted iron transport system. Acts as a receptor for bacteriophage T5 as well as T1, phi80 and colicin M. Bi
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1786344, Length=775, Percent_Identity=32.258064516129, Blast_Score=377, Evalue=1e-105, Organism=Escherichia coli, GI1787024, Length=699, Percent_Identity=25.6080114449213, Blast_Score=111, Evalue=2e-25, Organism=Escherichia coli, GI1787344, Length=734, Percent_Identity=22.8882833787466, Blast_Score=88, Evalue=3e-18, Organism=Escherichia coli, GI1790743, Length=790, Percent_Identity=22.7848101265823, Blast_Score=77, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 89064; Mature: 88932
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIGLGAARRGTTMTGRRGARPLASLLASTILGWSLASPASEVWAQQPQAIDQHAIRFQI CEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHCCCEEEEEC PAQPLASAIDAFIDQSGWQISYSTAVARDKTSSAVAGEMTPAEALRRLVSGTGLAVRLTG CCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECC ADAAALFDPLPQGDDQKTGALTLDTLTVEGAGIDPGVGLGGGVVTRGYVAEAARIGTKTD CCHHHHHCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC TDLKKVPQSIAVVSRQELEDRDAQSLVEAVGYSSGVRTGVYGFDPRFDTIHVRGFNVSSE CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCC GFYRDGLRDLGGSFSVFRKEPYGFEAVSVLKGPSSTLYGGGSPGGIIDVVSKRPTEQAFN CCHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCEEEECCCCCHHHHHC EIEIQAGTRDHRQINLDTSGPVLENDTVLYRLTGLYREADTQYLAAPNDRFYVAPAVTLR EEEEEECCCCCEEEEECCCCCEECCCEEEEEEEHHHHHCCCCEEECCCCCEEEEEEEEEE SDDRDTHLTLLTEYTDLTTGGAAGYYTSPDLKTRIETGDPAWGDFDQMQWRVGYEFEHRF CCCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHEEEEECCCHHHHH NDVLALRQNMRYSNIKADMRWTGINDISDDGATATRSTGRIRDEAWTIGVDTHAQADFAT HHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCC GPLSHTVLGGVDVSYIDSDYKYGAGTAPDLNLITGNYGQQAIEGPATLDLIRNTVRQRQT CCCCHHEECCCEEEEECCCCCCCCCCCCCCEEEECCCCCHHHCCCHHHHHHHHHHHHHHC GLYLQDQIEIDRVVLTFGGRYDWLRSQAKNRLDLSSSTEHYDDNFSYRVGLTYLFDNGIS CCEEEECCCEEEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEECCCCC PYVSYATSFAPTTGTSASGAAFEPTTGEQVEVGVKYIPDSLPLSINAALFKIRQENVLAS HHHHHHHHCCCCCCCCCCCCEECCCCCCEEEEEEEECCCCCCEEECHHHEEEECCCCCCC DPDNVYFQIQRGEVESTGFEIQATTRPIDGLDLTASYTYLDMEIAAGDNAGKIPSGIPHH CCCCEEEEEECCCCCCCCEEEEEECCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCH QITAWANYVFQSGLAKGLTLGAGSRFYGESWGNDTNTVKNDARVLVDAAIGYDFSALSPQ HHHHHHHHHHHHHHHHCEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHCCHH LRGVSAQINGKNLFDNRAVTFASNLSYREEGREVVGSLRYRF HCCEEEEECCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure TIGLGAARRGTTMTGRRGARPLASLLASTILGWSLASPASEVWAQQPQAIDQHAIRFQI EECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHCCCEEEEEC PAQPLASAIDAFIDQSGWQISYSTAVARDKTSSAVAGEMTPAEALRRLVSGTGLAVRLTG CCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECC ADAAALFDPLPQGDDQKTGALTLDTLTVEGAGIDPGVGLGGGVVTRGYVAEAARIGTKTD CCHHHHHCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC TDLKKVPQSIAVVSRQELEDRDAQSLVEAVGYSSGVRTGVYGFDPRFDTIHVRGFNVSSE CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCC GFYRDGLRDLGGSFSVFRKEPYGFEAVSVLKGPSSTLYGGGSPGGIIDVVSKRPTEQAFN CCHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCEEEECCCCCHHHHHC EIEIQAGTRDHRQINLDTSGPVLENDTVLYRLTGLYREADTQYLAAPNDRFYVAPAVTLR EEEEEECCCCCEEEEECCCCCEECCCEEEEEEEHHHHHCCCCEEECCCCCEEEEEEEEEE SDDRDTHLTLLTEYTDLTTGGAAGYYTSPDLKTRIETGDPAWGDFDQMQWRVGYEFEHRF CCCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHEEEEECCCHHHHH NDVLALRQNMRYSNIKADMRWTGINDISDDGATATRSTGRIRDEAWTIGVDTHAQADFAT HHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCC GPLSHTVLGGVDVSYIDSDYKYGAGTAPDLNLITGNYGQQAIEGPATLDLIRNTVRQRQT CCCCHHEECCCEEEEECCCCCCCCCCCCCCEEEECCCCCHHHCCCHHHHHHHHHHHHHHC GLYLQDQIEIDRVVLTFGGRYDWLRSQAKNRLDLSSSTEHYDDNFSYRVGLTYLFDNGIS CCEEEECCCEEEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEECCCCC PYVSYATSFAPTTGTSASGAAFEPTTGEQVEVGVKYIPDSLPLSINAALFKIRQENVLAS HHHHHHHHCCCCCCCCCCCCEECCCCCCEEEEEEEECCCCCCEEECHHHEEEECCCCCCC DPDNVYFQIQRGEVESTGFEIQATTRPIDGLDLTASYTYLDMEIAAGDNAGKIPSGIPHH CCCCEEEEEECCCCCCCCEEEEEECCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCH QITAWANYVFQSGLAKGLTLGAGSRFYGESWGNDTNTVKNDARVLVDAAIGYDFSALSPQ HHHHHHHHHHHHHHHHCEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHCCHH LRGVSAQINGKNLFDNRAVTFASNLSYREEGREVVGSLRYRF HCCEEEEECCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3079747; 8202364; 9278503; 2823072; 7515827; 8617231; 9856937; 9865695; 10850805 [H]