Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
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Accession | NC_007643 |
Length | 4,352,825 |
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The map label for this gene is fecR [H]
Identifier: 83593708
GI number: 83593708
Start: 2765104
End: 2766093
Strand: Direct
Name: fecR [H]
Synonym: Rru_A2373
Alternate gene names: 83593708
Gene position: 2765104-2766093 (Clockwise)
Preceding gene: 83593707
Following gene: 83593709
Centisome position: 63.52
GC content: 70.51
Gene sequence:
>990_bases GTGGGACGCGATGGCTCAGACCAGGAGATGACAACGGCGACCTATACCCACGAAGACCCCGTGGTCGATGCGGCGCTGGA CTGGTTCACCCGGCTGAGGGCCGGAACGCCCGATGACGCCACCTTGCGCGCCTTTCGGGCCTGGAGGGACGGCGATCCCC GCCACGCGCGCGAGTTTCGCGCCCTGGAAGAGCTGTGGGGCGCCCCAACCTTTGCGAAGGCCGCCACTTTGGCCGGCGCG CGCCCGGCGGCGCCCGCGCGCCCCAGCCGCGCGCCCTGGCGGCGACGGCTGGCCTTCGCCGCCAGCCTCGCCCTCGTCTT GGCCGCCATCTGGCGCTCTCCCGATGCGGTGGTGGCGTGGCGCGCCGACTATCTGACCGCCACCGGCGAGCGCGAGCGGG TAACCCTGCCCGATGGCTCGACGATGATCCTCAACACCGCCTCGGCCGTCGCCCTCGATTTCGCCAAAGGAGAGCGGGCG ATCACCCTGCTGGCGGGCGAGGCCTTCTTCGATGTGCGCCACGACGCCGATCACCCCTTCACGGTGACCGGCCGCTTTGG CGAAGTCCGCGTCGAGGGTACGGCCTTTTCGGTGGAGATGAAGGACGATCGCGACGAGATCGTGCTCGAGCGCGGCGCGG TGGCGGTGCGCTGTGTAGGCGCCTCCGGGCAAGCCGCCGCTCTCCATCCGGGCGAGGCCGTCAGCGTGACGGCGACGGCC CTCTCGCCGGTCCGGCGCGCCGCTCCCGAGCACGATCTTGCTTGGCGTAACGGGCGCATCCGCTTTGACGAACGCCCGCT CGGCGCCGTCGTCGAGGACCTGCGACGCTACCACAAGGGACCGATTTTCGTTCTGAACGACGCGGCCGAAGGCACCGTCG TCAGCGGCAATTATCGCCTGGACGATATCGCCGGCGCCTTGCGCACCCTGGCGGCGGCGACCGGCGCCGAAGTGATCGAG CTTCCGGCGGGCGTGGTGATTTTGCGATAG
Upstream 100 bases:
>100_bases TTGCCGCGATGCCATGGCGCGGGTCGATAAAAAAGAGAACGGCGCGCGAGAGCGGTTAAAGTGAAGGACGACACGACGTG GTGACGGGGGATTTGGTCCG
Downstream 100 bases:
>100_bases AGTCGCATCTTTATTTTCCGACCTGCCGGCCCTTCGACGTCTTGCTAGCGAGGGCGAGGGGGTCGCATGGGGCGATCCCT TCCCCCTTGGGATGACAAGA
Product: putative FecR
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 329; Mature: 328
Protein sequence:
>329_residues MGRDGSDQEMTTATYTHEDPVVDAALDWFTRLRAGTPDDATLRAFRAWRDGDPRHAREFRALEELWGAPTFAKAATLAGA RPAAPARPSRAPWRRRLAFAASLALVLAAIWRSPDAVVAWRADYLTATGERERVTLPDGSTMILNTASAVALDFAKGERA ITLLAGEAFFDVRHDADHPFTVTGRFGEVRVEGTAFSVEMKDDRDEIVLERGAVAVRCVGASGQAAALHPGEAVSVTATA LSPVRRAAPEHDLAWRNGRIRFDERPLGAVVEDLRRYHKGPIFVLNDAAEGTVVSGNYRLDDIAGALRTLAAATGAEVIE LPAGVVILR
Sequences:
>Translated_329_residues MGRDGSDQEMTTATYTHEDPVVDAALDWFTRLRAGTPDDATLRAFRAWRDGDPRHAREFRALEELWGAPTFAKAATLAGA RPAAPARPSRAPWRRRLAFAASLALVLAAIWRSPDAVVAWRADYLTATGERERVTLPDGSTMILNTASAVALDFAKGERA ITLLAGEAFFDVRHDADHPFTVTGRFGEVRVEGTAFSVEMKDDRDEIVLERGAVAVRCVGASGQAAALHPGEAVSVTATA LSPVRRAAPEHDLAWRNGRIRFDERPLGAVVEDLRRYHKGPIFVLNDAAEGTVVSGNYRLDDIAGALRTLAAATGAEVIE LPAGVVILR >Mature_328_residues GRDGSDQEMTTATYTHEDPVVDAALDWFTRLRAGTPDDATLRAFRAWRDGDPRHAREFRALEELWGAPTFAKAATLAGAR PAAPARPSRAPWRRRLAFAASLALVLAAIWRSPDAVVAWRADYLTATGERERVTLPDGSTMILNTASAVALDFAKGERAI TLLAGEAFFDVRHDADHPFTVTGRFGEVRVEGTAFSVEMKDDRDEIVLERGAVAVRCVGASGQAAALHPGEAVSVTATAL SPVRRAAPEHDLAWRNGRIRFDERPLGAVVEDLRRYHKGPIFVLNDAAEGTVVSGNYRLDDIAGALRTLAAATGAEVIEL PAGVVILR
Specific function: Regulation of iron dicitrate transport. In the absence of citrate fecR inactivates fecI. FecR is probably a sensor that recognizes iron dicitrate in the periplasm [H]
COG id: COG3712
COG function: function code PT; Fe2+-dicitrate sensor, membrane component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790745, Length=192, Percent_Identity=31.25, Blast_Score=92, Evalue=5e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006860 - InterPro: IPR012373 [H]
Pfam domain/function: PF04773 FecR [H]
EC number: NA
Molecular weight: Translated: 35557; Mature: 35426
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRDGSDQEMTTATYTHEDPVVDAALDWFTRLRAGTPDDATLRAFRAWRDGDPRHAREFR CCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHH ALEELWGAPTFAKAATLAGARPAAPARPSRAPWRRRLAFAASLALVLAAIWRSPDAVVAW HHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEE RADYLTATGERERVTLPDGSTMILNTASAVALDFAKGERAITLLAGEAFFDVRHDADHPF EECEEEECCCCCEEECCCCCEEEEECCCCEEEEECCCCEEEEEEECCEEEEECCCCCCCE TVTGRFGEVRVEGTAFSVEMKDDRDEIVLERGAVAVRCVGASGQAAALHPGEAVSVTATA EEEECCCEEEEECEEEEEEECCCCCCEEEECCCEEEEEECCCCCEEEECCCCEEEEEHHH LSPVRRAAPEHDLAWRNGRIRFDERPLGAVVEDLRRYHKGPIFVLNDAAEGTVVSGNYRL HHHHHHCCCCCCCEECCCEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCEEEECCCCH DDIAGALRTLAAATGAEVIELPAGVVILR HHHHHHHHHHHHHCCCCEEECCCCEEEEC >Mature Secondary Structure GRDGSDQEMTTATYTHEDPVVDAALDWFTRLRAGTPDDATLRAFRAWRDGDPRHAREFR CCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHH ALEELWGAPTFAKAATLAGARPAAPARPSRAPWRRRLAFAASLALVLAAIWRSPDAVVAW HHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEE RADYLTATGERERVTLPDGSTMILNTASAVALDFAKGERAITLLAGEAFFDVRHDADHPF EECEEEECCCCCEEECCCCCEEEEECCCCEEEEECCCCEEEEEEECCEEEEECCCCCCCE TVTGRFGEVRVEGTAFSVEMKDDRDEIVLERGAVAVRCVGASGQAAALHPGEAVSVTATA EEEECCCEEEEECEEEEEEECCCCCCEEEECCCEEEEEECCCCCEEEECCCCEEEEEHHH LSPVRRAAPEHDLAWRNGRIRFDERPLGAVVEDLRRYHKGPIFVLNDAAEGTVVSGNYRL HHHHHHCCCCCCCEECCCEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCEEEECCCCH DDIAGALRTLAAATGAEVIELPAGVVILR HHHHHHHHHHHHHCCCCEEECCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2254251; 7610040; 9278503 [H]