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The map label for this gene is fecI [C]

Identifier: 83593707

GI number: 83593707

Start: 2764423

End: 2765067

Strand: Direct

Name: fecI [C]

Synonym: Rru_A2372

Alternate gene names: 83593707

Gene position: 2764423-2765067 (Clockwise)

Preceding gene: 83593706

Following gene: 83593708

Centisome position: 63.51

GC content: 63.57

Gene sequence:

>645_bases
ATGCTATGGCCGTACCGAAAATGCGAAGCGTTTGCATTTCAGCCCCGGGAACCCCTTCCCGGGATGGGATGCTCCTCCCG
TTCCGTAAGGCGAAAGCGTATTGTGTCGGCTGTCCTGAATGCCGTTTTCGAGAGCTATCGGCGCTCGCTCCTGGGGAAAT
TGACGCGGATCGTCCAGGACCGGCAGATCGCCGAGGATTTGACCCAGGAAACTTACCTGCGGGTGCGGCGGGCGGCGGAA
AGCGGGCCGATCGATCATATCGAGGCGTTCTTGCACCGGACGGCGCGCAATCTCGCCCTGGATCATCTGCGGCGGACCAA
GCGGCGGGCGGGAATGGGGAGCAGCGCGGTCGAGGACGGCGCGATCGATGATCTGGCCGATGACCGCCCCTCGGCCGAGG
AGGCGCTGATCGAGCGTCAGACTCTAACGGTGTTGAGCGAGGCGATGGCCCGCCTTCCCCAGCGGGCCCGCTTGGTTCTG
ACCCTCAGCCGGGTCGAGGACTGGCCCAACACCAAGATCGCCGCCCATCTCGGCATTTCCGAACGCACCGTTTTCAACGA
CCTGAAGCTCGCCCTCGGCCATTGCCGCGATGCCATGGCGCGGGTCGATAAAAAAGAGAACGGCGCGCGAGAGCGGTTAA
AGTGA

Upstream 100 bases:

>100_bases
ACCCTGGGACAAACGGCCACCGTCAGCGCCTGACCGCGCCAAGCGCGCGGGCCCCCTCCCCGCCCCCGCCGGGGTGACGG
GTTGCCATCCCCTTTCCCAG

Downstream 100 bases:

>100_bases
AGGACGACACGACGTGGTGACGGGGGATTTGGTCCGGTGGGACGCGATGGCTCAGACCAGGAGATGACAACGGCGACCTA
TACCCACGAAGACCCCGTGG

Product: sigma-24 (FecI)

Products: NA

Alternate protein names: Sigma-; ECF Subfamily RNA Polymerase Sigma Factor; RNA Polymerase Sigma Factor; RNA Polymerase Sigma-24 Subunit ECF Subfamily; RNA Polymerase Sigma Factor FecI; Fec I Like Protein; RNA Polymerase Sigma-70 Family Protein; RNA Polymerase Sigma Factor Sigma-70 Family; Sigma-70 Family RNA Polymerase Sigma Factor; ECF Family Sigma Factor; RNA Polymerase ECF-Type Sigma Factor; RNA Polymerase Sigma-70 Factor; RNA Polymerase Sigma-24 Subunit Ecf Subfamily; FecI-Like Protein; RNA Polymerase ECF-Subfamily Sigma-70 Factor; RNA Polymerase Sigma-70 Factor ECF Subfamily; Transcriptional Regulator LuxR Family; RNA Polymerase Sigma-24 Factor; DNA-Directed RNA Polymerase Sigma-E/Sigma-24/FecI; Extracytoplasmic-Function Sigma-70 Factor PvdS; RNA Polymerase Sigma Factor Protein; DNA-Directed RNA Polymeracialized Sigma Subunit; ECF Subfamily RNA Polymerase Sigma-70 Factor; RNA Polymerase Sigma-70 Factor FecI; ECF Sigma Factor; ECF-Sigma Factor; RNA Polymerase Sigma Subunit Ecf Family; Anti-FecI Sigma Factor FecR; RNA Polymerase Sigma Factor FecI Family

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MLWPYRKCEAFAFQPREPLPGMGCSSRSVRRKRIVSAVLNAVFESYRRSLLGKLTRIVQDRQIAEDLTQETYLRVRRAAE
SGPIDHIEAFLHRTARNLALDHLRRTKRRAGMGSSAVEDGAIDDLADDRPSAEEALIERQTLTVLSEAMARLPQRARLVL
TLSRVEDWPNTKIAAHLGISERTVFNDLKLALGHCRDAMARVDKKENGARERLK

Sequences:

>Translated_214_residues
MLWPYRKCEAFAFQPREPLPGMGCSSRSVRRKRIVSAVLNAVFESYRRSLLGKLTRIVQDRQIAEDLTQETYLRVRRAAE
SGPIDHIEAFLHRTARNLALDHLRRTKRRAGMGSSAVEDGAIDDLADDRPSAEEALIERQTLTVLSEAMARLPQRARLVL
TLSRVEDWPNTKIAAHLGISERTVFNDLKLALGHCRDAMARVDKKENGARERLK
>Mature_214_residues
MLWPYRKCEAFAFQPREPLPGMGCSSRSVRRKRIVSAVLNAVFESYRRSLLGKLTRIVQDRQIAEDLTQETYLRVRRAAE
SGPIDHIEAFLHRTARNLALDHLRRTKRRAGMGSSAVEDGAIDDLADDRPSAEEALIERQTLTVLSEAMARLPQRARLVL
TLSRVEDWPNTKIAAHLGISERTVFNDLKLALGHCRDAMARVDKKENGARERLK

Specific function: Sigma Factors Are Initiation Factors That Promote The Attachment Of RNA Polymerase To Specific Initiation Sites And Are Then Released. This Sigma Factor Regulates The Fec Genes For Iron Dicitrate Transport (Probable). [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24312; Mature: 24312

Theoretical pI: Translated: 10.59; Mature: 10.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLWPYRKCEAFAFQPREPLPGMGCSSRSVRRKRIVSAVLNAVFESYRRSLLGKLTRIVQD
CCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RQIAEDLTQETYLRVRRAAESGPIDHIEAFLHRTARNLALDHLRRTKRRAGMGSSAVEDG
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCC
AIDDLADDRPSAEEALIERQTLTVLSEAMARLPQRARLVLTLSRVEDWPNTKIAAHLGIS
CHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCEEHCCCCH
ERTVFNDLKLALGHCRDAMARVDKKENGARERLK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCC
>Mature Secondary Structure
MLWPYRKCEAFAFQPREPLPGMGCSSRSVRRKRIVSAVLNAVFESYRRSLLGKLTRIVQD
CCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RQIAEDLTQETYLRVRRAAESGPIDHIEAFLHRTARNLALDHLRRTKRRAGMGSSAVEDG
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCC
AIDDLADDRPSAEEALIERQTLTVLSEAMARLPQRARLVLTLSRVEDWPNTKIAAHLGIS
CHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCEEHCCCCH
ERTVFNDLKLALGHCRDAMARVDKKENGARERLK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA