Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
---|---|
Accession | NC_007643 |
Length | 4,352,825 |
Click here to switch to the map view.
The map label for this gene is ycdQ [C]
Identifier: 83593683
GI number: 83593683
Start: 2722265
End: 2727778
Strand: Direct
Name: ycdQ [C]
Synonym: Rru_A2348
Alternate gene names: 83593683
Gene position: 2722265-2727778 (Clockwise)
Preceding gene: 83593678
Following gene: 83593684
Centisome position: 62.54
GC content: 70.95
Gene sequence:
>5514_bases ATGCCCGATACGCCCGCATTCACCCTTGTCGCCCACCTTGAAGCCGGTGACTGGGACGCCCTTCGGCGGGCGCTTTCCCA AAAGGAAACCCCCGCGAGCCTTCTCACCCAAACCTTGGCCGAGGGCCGCTGCCCCGAAACCCCTCCCCCGCCGGGCGGAG CGTTTTTGCCAAGCTATTCCCTGAAAAGAAGCCTGGGCGACCCGAGTGCCGTCGTTGCCCGCCTGTGTCAGATCGCCCGC GAGACCCGGGCCGCCGGCAATGACCCGCTGGCGGCGGACCTCTACCGCACGGCCCTGGCCTTCGACCCCAGATGCGCCGA GGCGTCGCTGGCGTTGGCCTGGGACAGCTACGCCCGGGGCGACCGCTGCGGCGCCGTGGACCGGGCCGAACGGGCGGTCC AGGCGACCCCCAACGATGCCGAGGCCGCGACCACGCTCGGCTGGCTGTACTGGGAAGCCGGCCGGGGAGAGGCGGCGACG CGGACGCTGTGTGCGGCGGTTGACCGCCACCCGCGACAGGCGACGGCTTATTGGTATTTGGGGCATATCTGCGCCCGCCA GGGGCGACTGGCCGAGGCCGAGCGCCTGTTGCGCCACGCCCTGGCCCTGGCGGCCGACACCGACGCGCCCAACGGCGAGA TCGCCGCCAGCCTGTCTTGGGTGCTGGCTGATCTCGGGCGCCTTGACGAGGCCCTGACCCTCGCCCACGACACCGCCCGA CGCGATCCCGCGCCGCGCCACCTCGCCCACCTTGGGCGGCTGCTGACGCAAAAAGGGGAATACGAGGCGGCCCTGGTCCT GCTTGACCGGGCCACGGCGGAGAGGCCCGGTGATTGGGCCGCGACGGCCGACCTCGCCACCGCGCTTAGCCGCACCGGCC GTGGCAGGGAGGCCTTGACCCTGATCGAAACCGCCCTTGCCGCCGCTCCCGACGAGCGCCGGCTGGCCCTGCGACAGGCG ACGCTGTTGCGCGACGGCGGCGCCCATCCCCAGGCCGCCCTGATCGCCGCGCAGATCGTCGAGCGCTGGCCGGACTGGGG CGAAGGGTGGTTTCTGCGCGGCCAGATCAAGCGCGACGACGGCCAGGATGAAGAGGCGCTGGACTGCTTCGCCCGGGCGC AGGCATGCGATCCCTCGTTGATCGCCGCCATCTTGGAACGCTCGCGTCTGTTGCTGCGGCTGGGTCGGGCCGAGGCGGCG GCCGGGCTGATGGAGGATCTGTTGCGCGAGGCGCCCGGCCATCCCGCCGCCCGCAAGCACTTGGCCTGGGCCCTGATCGG CCAGCGCAAGGGCGCGATCGCCCGTCCGCAGATCCACATCTTGTTGCAAAGCGCGCCGCGGGCCGCCGAGTTGTGGACGG CCCTGTCAACGGCGCTCCACCAGATGGGCCGGCTGACCACCGCCCGCCTTGCCGCCCGCCGGGCCAGACGCCTCGCGCCA ACCGACTGCGACGCCCTGCGCCATGGCGCCGCTTTGGAACTGGAGGCGGGCGATCTTTCGGCGACGTCGGAACTGTGCCA CCGGTTGCTGCATCTGGCCCCGACCTTGCCCGCCGCCCACATCATGGCCGGTTTCGCCCATCAAGCCTCGGGCCGGCTGG TCGCGGCCGAGCGCCATGCCGAACAGGCGATCGCCCTGGCCCCCAAGGACGCGGAGGCCTGGAGGTGCCTTGGCCATCTG CGCCATCACCAGAACCGGCTGGCCGAGGCCGAGGAGGCTTTGCACAACGCCCACGCGCTGGCGCCCGGACGCGGGGACGT GCTGGGGCAACTCGCCTGGGTTCTGGTGATGGACGACCGCCTGCCCGAAGCCTTGATCGTCATGCGCAAGGCCTGCGACC TGACGCCCGAGAGCGCCGAGCGGGCGCTGGAACAGGCCGAGATGCTGGCCCTGGCCGGCCGCCCCGCCGAGGCGATCATC GCCGCCACCCGGGCCCGGGATCTCGGTCCCTCGCCGCTGGCCGCCCAAGCCTTGCTGGCCAGGATCCACCTCAGTCGGGG GCATATCGAGGCGGGCGACGGCGATACGGCTTGGGCAGAGGCCGCCCGGTGCGCCGCCACCTTGCTTTACCGCGACCCCA GCCACCTCGCCGCCGCCCATGTCGCCGTACGGCTGGCCGCCGCCGGCCAACCGCGCGCCGCCGATCTGGTGGCGCTGCTG CCAAGCGCCCTGCATCGCCGCGTCCTGCGCGAAGGCCTGGAATGGGTGACCGGCTTTGGCAATGCCCGGGAGGCGACGCG CCTGACCCGGGCGACCCGGGCGGCCTTTCCCGAAGATCGCGACCTGACCATCGCCTGCCTTTATCTGGAAACCATGGCCG GACAGGCGCCCGCCGCCGACACCGCCCGCCAATTGCGGCAGTGGGGCCTGGAGCACGCCCAGTCCTGGGGCCCCCTGCCG CCCCGCCCCCGGCTGGCCGCCACGCCCGGTCGCCCCCTCCACGTCGCCTATCTCGCCTCGCGCTATCACCATGCCCTGCT GAGCGGCATTCTCGCGACGCATGATCGCGCCGTTGTCGTGCCCCATCTCTATACCGATGACGCCGAGGCTCTACCGCCCG ATCTGCGCTCGCGGGTCATCGTCCACCCGCTGGGCGGTGTCGATCTGGCGGCGTCCTGTGCCGCCAATGGCATCGATGTC GTCGTCGATACCGTCGGCCTGCACCCCTTTCACGGGCAGGCCGAGGTCCTGCGCTTCCTGCGCCGCCGCCTCGCGCCATC GCAATGGGGCTGGTTTGGCGGTTGGGGGCCGGGAAGCGGCCTTTTCGATGGTCTGATCACCGATACCGTCGCCCTGCCCG CCGCCGCCGACCATCACGACGAGGATATCCTGGCCCTCGCCGGGGGCCAGTGGAGCTGGACGCCGCCCGCCGTCGCCCCG GCCATCGGCCCTTTGCCCTCGGCGCAAACCGGCATCATCACCTTCGGCTGCGCGGTGCGCGGCTTCCGCATCAGCCGAAG CTGCCTGGAAACCTGGGCCGATCTGCTGGCCGGCATGGACAACGCGCGCCTGATGATTCTGGGGCGTCAGGCCCATGACT GGGAATTCCGCGCCGGCTTCTCCCGTCTTCTCCAGGCGTGCGGCATCGCGCCCGAGCGCGTGGTCTATCGCTTTCAGCAA GCTTACGCCGACCATCTGCACAGCTTCGCCGGCATCGACATCGCCCTTGACACCTTCCCGGCCAATGGCGGCCTGTGCCT TGCCGACGCCTTGTGGATGGGCGTGCCGGTGGTCACCTTGGCCGGAACGGGTCTGCTGGCCGAACGCCAGGGGGCCTCGC TTCTCGCCGCGGCGGATTGTGGCGACTGGATCGCCCGCAGCCCCGCCGACTATCTGGCGATCGCCCGCAAGCTGGCCGGC GATCGACAGGACCTGGCCCTGATCCGGCACACCCTGCGCGACCGGCTCGGCGCCTCGCCCTTGCTCGATGCGCGCCGCAT CACCAGCCAGTTGGAAGCGGCTTGGTTGAAGGCGCGCGACGCCATGGCCGGGATCACCGCCGCTCCCGATCTCAAAAGCC GCTCTCAGGCGCTTGCCAAGCGGGATCTGGCGGTCTGGCTTGGGCGCGAGCGCTCGCTGACTCTGCCACCTTCGCAAGGC GCCGATGACGCGCCCGATCTCTCGGTGGTCATCGTCCTTTACAATCAGGCGGGGCTTAGTCTGCGAACCCTGATCGCCCT GGCCGATCAGCAGGGGGTTCGCTTCGAGACCATCATCGTCGACAACGCGTCGACGGATGAAACGCCGGCCCTGCTGGCCC GGGTGCGCGGCGCCACCCTTTTGCGCAACGAAGACAACATCGGCTTTCTGCGCGCGGCCAATCAGGGGGCGGCCGTGGCG CGCGGCAAGCACATCGTCTTCTTGAACAATGACGTCTTCCTCCATCGCGACGCCCTCGCCGCCGCCCTGCGCCGCCTGCG CGCGGACCCCTCCATCGGCGTAGTCGGTGGCCGGGTGGTGCTGATCGACGGCAGCCTTCAAGAGGCGGGCTGCATGGTTT TCAACGATGGCTCGACCGCCGGCTATGGGCGTGGCGAGGATCCCAACCTTGCGGAATTCCGCTTCCTGCGCGAGGTCGAT TACGTCTCGGGGGCCTTCCTGATGCTGCCCCGGGCCCTGTGGCGGGCGCTTGGCGGCTTCGAGCCAGCCTTGGCGCCAGC CTATTACGAGGATACCGACCTGTGCCTCAGGGTTCATCGCGCCGGCTTCCGGGTGGTCTATGATCCCGCCGTCGTCCTCA CCCATGTGGAGGGGGGCAGCACCGTCACCTCGGACGCCGCCGCCGCCATGATCCGCCGCAACCGCGGCGCCTTCCTGGCC CGCCACGCCGAGGCCTTGCGCTCCCGCCCGTCACCGGCGGCCGCGCGGCCCTTGCGCGATCGCTGGGCGCCCGCGCCGGC GCCCCGGGTTCTGGTCATCGACAACGGCGTGCCCCATAGCGCCGGGGGCGCGGGCAATCCCCGGGCCCGCCTGATGATCG AGGCCCTGGCGGGCTGTCATGTCACCTTCTTTCCCATGTGGGTCCGCGAAAGCGACTGGGCGGCCGTTTATCGGACCCTT GGCGCCGAGGTCGAGGTTATGCTCGATCAGCATGCGACCACGCTGGAAGACTTCCTCGACCACCGCCAGGGACTCTATGA TGTGCTGGTGGTCAGCCGCCCGCCCAACATGGCGATCGTCAAGGCCATCGGCCGCCGCCGCCCCGACCTGTTGAAGGGGA TGAGGCTGGTTTATGACGCCGAGGCGCTGTTCGCCCTGCGTGACATCGCCCAGGCGGCGATCACCGCCCGCCCGCTCCCC CGCACCGAGGCCCGCCGGCGCCTGCGCGACGAACTCGACCTTGCCGCCGGCGCCGATACGGTTCTCGCCGTTTCCCGACG CGAAGCCCGGCTGTTTTCCGCCGGAGGAGCGGCCAAGGTTCATCTCGTCAGCCACGCCCTGCCCGCCCATCCCGCCCCGC CGGGACGGGACGGACGCTCGGGATTCCTGTTCCTGGGCGCCCTGACGCCGGGGAGTCCCAACGAGGATAGCCTTGTTTGG CTGGTCGAGAGCGTTCTGCCGGCTCTGGCCCGACGCCTACCCCGACCGCCGCCGCATCTTAGCATCCTCGGCGAATGCCG CTCCTCGCGCATCGCCGCCCTGGCCGGCGAACAGGTTCGCTTGGTCGGACGGGTGGAAGACCCGGCGCCCTGGTATGATC AGGCGGCGGTCTTCGTCGCCCCGACCCGCTTTGCCGCCGGCATCCCCCTCAAAGTGATCGAGGCCGCCGCCGCCGGGCTG CCGGTGGTGGCGACGCCCTTGCTGGCGCGGCAATTGGGCTGGAGCACCGGGGATTACCTCTTGGCCGCCGGCGATGCCGA GGGCTTCGCCGCCGCCATGGCGGCCCTTTACACGGACGGCGCGCTGTGGCGACGCATCCGCGATGGCGCCCTGGCCCGGG TGAGCACCGAGAACGCCCCCGACCGTTTCCGCGACACGCTGCGCGAGGCCGTTCTGGGGAGGGGGATCGGATGA
Upstream 100 bases:
>100_bases AGGTGATAACGCGATTGGAGAGACCTCCCGCGACTTTGGGAGGCTTTCGTCTTCCCTGGCATTGAGAAATCCCCTCATCC CCCTAGGATTCCGAAGACTT
Downstream 100 bases:
>100_bases TCGAGCCGCCGCATTTGACCCATCCCTGGCCCTTGCCGCTCCGCCGCCTGCTTATCGAAGGCAGGCGGGCGCTGCGCCTG GGCGACAGGGAGGGCGCGGC
Product: glycosyl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 1837; Mature: 1836
Protein sequence:
>1837_residues MPDTPAFTLVAHLEAGDWDALRRALSQKETPASLLTQTLAEGRCPETPPPPGGAFLPSYSLKRSLGDPSAVVARLCQIAR ETRAAGNDPLAADLYRTALAFDPRCAEASLALAWDSYARGDRCGAVDRAERAVQATPNDAEAATTLGWLYWEAGRGEAAT RTLCAAVDRHPRQATAYWYLGHICARQGRLAEAERLLRHALALAADTDAPNGEIAASLSWVLADLGRLDEALTLAHDTAR RDPAPRHLAHLGRLLTQKGEYEAALVLLDRATAERPGDWAATADLATALSRTGRGREALTLIETALAAAPDERRLALRQA TLLRDGGAHPQAALIAAQIVERWPDWGEGWFLRGQIKRDDGQDEEALDCFARAQACDPSLIAAILERSRLLLRLGRAEAA AGLMEDLLREAPGHPAARKHLAWALIGQRKGAIARPQIHILLQSAPRAAELWTALSTALHQMGRLTTARLAARRARRLAP TDCDALRHGAALELEAGDLSATSELCHRLLHLAPTLPAAHIMAGFAHQASGRLVAAERHAEQAIALAPKDAEAWRCLGHL RHHQNRLAEAEEALHNAHALAPGRGDVLGQLAWVLVMDDRLPEALIVMRKACDLTPESAERALEQAEMLALAGRPAEAII AATRARDLGPSPLAAQALLARIHLSRGHIEAGDGDTAWAEAARCAATLLYRDPSHLAAAHVAVRLAAAGQPRAADLVALL PSALHRRVLREGLEWVTGFGNAREATRLTRATRAAFPEDRDLTIACLYLETMAGQAPAADTARQLRQWGLEHAQSWGPLP PRPRLAATPGRPLHVAYLASRYHHALLSGILATHDRAVVVPHLYTDDAEALPPDLRSRVIVHPLGGVDLAASCAANGIDV VVDTVGLHPFHGQAEVLRFLRRRLAPSQWGWFGGWGPGSGLFDGLITDTVALPAAADHHDEDILALAGGQWSWTPPAVAP AIGPLPSAQTGIITFGCAVRGFRISRSCLETWADLLAGMDNARLMILGRQAHDWEFRAGFSRLLQACGIAPERVVYRFQQ AYADHLHSFAGIDIALDTFPANGGLCLADALWMGVPVVTLAGTGLLAERQGASLLAAADCGDWIARSPADYLAIARKLAG DRQDLALIRHTLRDRLGASPLLDARRITSQLEAAWLKARDAMAGITAAPDLKSRSQALAKRDLAVWLGRERSLTLPPSQG ADDAPDLSVVIVLYNQAGLSLRTLIALADQQGVRFETIIVDNASTDETPALLARVRGATLLRNEDNIGFLRAANQGAAVA RGKHIVFLNNDVFLHRDALAAALRRLRADPSIGVVGGRVVLIDGSLQEAGCMVFNDGSTAGYGRGEDPNLAEFRFLREVD YVSGAFLMLPRALWRALGGFEPALAPAYYEDTDLCLRVHRAGFRVVYDPAVVLTHVEGGSTVTSDAAAAMIRRNRGAFLA RHAEALRSRPSPAAARPLRDRWAPAPAPRVLVIDNGVPHSAGGAGNPRARLMIEALAGCHVTFFPMWVRESDWAAVYRTL GAEVEVMLDQHATTLEDFLDHRQGLYDVLVVSRPPNMAIVKAIGRRRPDLLKGMRLVYDAEALFALRDIAQAAITARPLP RTEARRRLRDELDLAAGADTVLAVSRREARLFSAGGAAKVHLVSHALPAHPAPPGRDGRSGFLFLGALTPGSPNEDSLVW LVESVLPALARRLPRPPPHLSILGECRSSRIAALAGEQVRLVGRVEDPAPWYDQAAVFVAPTRFAAGIPLKVIEAAAAGL PVVATPLLARQLGWSTGDYLLAAGDAEGFAAAMAALYTDGALWRRIRDGALARVSTENAPDRFRDTLREAVLGRGIG
Sequences:
>Translated_1837_residues MPDTPAFTLVAHLEAGDWDALRRALSQKETPASLLTQTLAEGRCPETPPPPGGAFLPSYSLKRSLGDPSAVVARLCQIAR ETRAAGNDPLAADLYRTALAFDPRCAEASLALAWDSYARGDRCGAVDRAERAVQATPNDAEAATTLGWLYWEAGRGEAAT RTLCAAVDRHPRQATAYWYLGHICARQGRLAEAERLLRHALALAADTDAPNGEIAASLSWVLADLGRLDEALTLAHDTAR RDPAPRHLAHLGRLLTQKGEYEAALVLLDRATAERPGDWAATADLATALSRTGRGREALTLIETALAAAPDERRLALRQA TLLRDGGAHPQAALIAAQIVERWPDWGEGWFLRGQIKRDDGQDEEALDCFARAQACDPSLIAAILERSRLLLRLGRAEAA AGLMEDLLREAPGHPAARKHLAWALIGQRKGAIARPQIHILLQSAPRAAELWTALSTALHQMGRLTTARLAARRARRLAP TDCDALRHGAALELEAGDLSATSELCHRLLHLAPTLPAAHIMAGFAHQASGRLVAAERHAEQAIALAPKDAEAWRCLGHL RHHQNRLAEAEEALHNAHALAPGRGDVLGQLAWVLVMDDRLPEALIVMRKACDLTPESAERALEQAEMLALAGRPAEAII AATRARDLGPSPLAAQALLARIHLSRGHIEAGDGDTAWAEAARCAATLLYRDPSHLAAAHVAVRLAAAGQPRAADLVALL PSALHRRVLREGLEWVTGFGNAREATRLTRATRAAFPEDRDLTIACLYLETMAGQAPAADTARQLRQWGLEHAQSWGPLP PRPRLAATPGRPLHVAYLASRYHHALLSGILATHDRAVVVPHLYTDDAEALPPDLRSRVIVHPLGGVDLAASCAANGIDV VVDTVGLHPFHGQAEVLRFLRRRLAPSQWGWFGGWGPGSGLFDGLITDTVALPAAADHHDEDILALAGGQWSWTPPAVAP AIGPLPSAQTGIITFGCAVRGFRISRSCLETWADLLAGMDNARLMILGRQAHDWEFRAGFSRLLQACGIAPERVVYRFQQ AYADHLHSFAGIDIALDTFPANGGLCLADALWMGVPVVTLAGTGLLAERQGASLLAAADCGDWIARSPADYLAIARKLAG DRQDLALIRHTLRDRLGASPLLDARRITSQLEAAWLKARDAMAGITAAPDLKSRSQALAKRDLAVWLGRERSLTLPPSQG ADDAPDLSVVIVLYNQAGLSLRTLIALADQQGVRFETIIVDNASTDETPALLARVRGATLLRNEDNIGFLRAANQGAAVA RGKHIVFLNNDVFLHRDALAAALRRLRADPSIGVVGGRVVLIDGSLQEAGCMVFNDGSTAGYGRGEDPNLAEFRFLREVD YVSGAFLMLPRALWRALGGFEPALAPAYYEDTDLCLRVHRAGFRVVYDPAVVLTHVEGGSTVTSDAAAAMIRRNRGAFLA RHAEALRSRPSPAAARPLRDRWAPAPAPRVLVIDNGVPHSAGGAGNPRARLMIEALAGCHVTFFPMWVRESDWAAVYRTL GAEVEVMLDQHATTLEDFLDHRQGLYDVLVVSRPPNMAIVKAIGRRRPDLLKGMRLVYDAEALFALRDIAQAAITARPLP RTEARRRLRDELDLAAGADTVLAVSRREARLFSAGGAAKVHLVSHALPAHPAPPGRDGRSGFLFLGALTPGSPNEDSLVW LVESVLPALARRLPRPPPHLSILGECRSSRIAALAGEQVRLVGRVEDPAPWYDQAAVFVAPTRFAAGIPLKVIEAAAAGL PVVATPLLARQLGWSTGDYLLAAGDAEGFAAAMAALYTDGALWRRIRDGALARVSTENAPDRFRDTLREAVLGRGIG >Mature_1836_residues PDTPAFTLVAHLEAGDWDALRRALSQKETPASLLTQTLAEGRCPETPPPPGGAFLPSYSLKRSLGDPSAVVARLCQIARE TRAAGNDPLAADLYRTALAFDPRCAEASLALAWDSYARGDRCGAVDRAERAVQATPNDAEAATTLGWLYWEAGRGEAATR TLCAAVDRHPRQATAYWYLGHICARQGRLAEAERLLRHALALAADTDAPNGEIAASLSWVLADLGRLDEALTLAHDTARR DPAPRHLAHLGRLLTQKGEYEAALVLLDRATAERPGDWAATADLATALSRTGRGREALTLIETALAAAPDERRLALRQAT LLRDGGAHPQAALIAAQIVERWPDWGEGWFLRGQIKRDDGQDEEALDCFARAQACDPSLIAAILERSRLLLRLGRAEAAA GLMEDLLREAPGHPAARKHLAWALIGQRKGAIARPQIHILLQSAPRAAELWTALSTALHQMGRLTTARLAARRARRLAPT DCDALRHGAALELEAGDLSATSELCHRLLHLAPTLPAAHIMAGFAHQASGRLVAAERHAEQAIALAPKDAEAWRCLGHLR HHQNRLAEAEEALHNAHALAPGRGDVLGQLAWVLVMDDRLPEALIVMRKACDLTPESAERALEQAEMLALAGRPAEAIIA ATRARDLGPSPLAAQALLARIHLSRGHIEAGDGDTAWAEAARCAATLLYRDPSHLAAAHVAVRLAAAGQPRAADLVALLP SALHRRVLREGLEWVTGFGNAREATRLTRATRAAFPEDRDLTIACLYLETMAGQAPAADTARQLRQWGLEHAQSWGPLPP RPRLAATPGRPLHVAYLASRYHHALLSGILATHDRAVVVPHLYTDDAEALPPDLRSRVIVHPLGGVDLAASCAANGIDVV VDTVGLHPFHGQAEVLRFLRRRLAPSQWGWFGGWGPGSGLFDGLITDTVALPAAADHHDEDILALAGGQWSWTPPAVAPA IGPLPSAQTGIITFGCAVRGFRISRSCLETWADLLAGMDNARLMILGRQAHDWEFRAGFSRLLQACGIAPERVVYRFQQA YADHLHSFAGIDIALDTFPANGGLCLADALWMGVPVVTLAGTGLLAERQGASLLAAADCGDWIARSPADYLAIARKLAGD RQDLALIRHTLRDRLGASPLLDARRITSQLEAAWLKARDAMAGITAAPDLKSRSQALAKRDLAVWLGRERSLTLPPSQGA DDAPDLSVVIVLYNQAGLSLRTLIALADQQGVRFETIIVDNASTDETPALLARVRGATLLRNEDNIGFLRAANQGAAVAR GKHIVFLNNDVFLHRDALAAALRRLRADPSIGVVGGRVVLIDGSLQEAGCMVFNDGSTAGYGRGEDPNLAEFRFLREVDY VSGAFLMLPRALWRALGGFEPALAPAYYEDTDLCLRVHRAGFRVVYDPAVVLTHVEGGSTVTSDAAAAMIRRNRGAFLAR HAEALRSRPSPAAARPLRDRWAPAPAPRVLVIDNGVPHSAGGAGNPRARLMIEALAGCHVTFFPMWVRESDWAAVYRTLG AEVEVMLDQHATTLEDFLDHRQGLYDVLVVSRPPNMAIVKAIGRRRPDLLKGMRLVYDAEALFALRDIAQAAITARPLPR TEARRRLRDELDLAAGADTVLAVSRREARLFSAGGAAKVHLVSHALPAHPAPPGRDGRSGFLFLGALTPGSPNEDSLVWL VESVLPALARRLPRPPPHLSILGECRSSRIAALAGEQVRLVGRVEDPAPWYDQAAVFVAPTRFAAGIPLKVIEAAAAGLP VVATPLLARQLGWSTGDYLLAAGDAEGFAAAMAALYTDGALWRRIRDGALARVSTENAPDRFRDTLREAVLGRGIG
Specific function: Unknown
COG id: COG3914
COG function: function code O; Predicted O-linked N-acetylglucosamine transferase, SPINDLY family
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI32307150, Length=439, Percent_Identity=22.5512528473804, Blast_Score=94, Evalue=2e-18, Organism=Homo sapiens, GI32307148, Length=447, Percent_Identity=22.1476510067114, Blast_Score=93, Evalue=2e-18, Organism=Caenorhabditis elegans, GI115532692, Length=369, Percent_Identity=23.3062330623306, Blast_Score=84, Evalue=7e-16, Organism=Caenorhabditis elegans, GI115532690, Length=369, Percent_Identity=23.3062330623306, Blast_Score=84, Evalue=8e-16, Organism=Drosophila melanogaster, GI17647755, Length=433, Percent_Identity=22.4018475750577, Blast_Score=88, Evalue=7e-17, Organism=Drosophila melanogaster, GI24585827, Length=433, Percent_Identity=22.4018475750577, Blast_Score=88, Evalue=7e-17, Organism=Drosophila melanogaster, GI24585829, Length=433, Percent_Identity=22.4018475750577, Blast_Score=88, Evalue=7e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 197393; Mature: 197262
Theoretical pI: Translated: 7.55; Mature: 7.55
Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDTPAFTLVAHLEAGDWDALRRALSQKETPASLLTQTLAEGRCPETPPPPGGAFLPSYS CCCCCCEEEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHH LKRSLGDPSAVVARLCQIARETRAAGNDPLAADLYRTALAFDPRCAEASLALAWDSYARG HHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEHHHCCC DRCGAVDRAERAVQATPNDAEAATTLGWLYWEAGRGEAATRTLCAAVDRHPRQATAYWYL CCCCCHHHHHHHHCCCCCCHHHHHHHHEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHH GHICARQGRLAEAERLLRHALALAADTDAPNGEIAASLSWVLADLGRLDEALTLAHDTAR HHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC RDPAPRHLAHLGRLLTQKGEYEAALVLLDRATAERPGDWAATADLATALSRTGRGREALT CCCCHHHHHHHHHHHHCCCCCCEEEEEEEHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHH LIETALAAAPDERRLALRQATLLRDGGAHPQAALIAAQIVERWPDWGEGWFLRGQIKRDD HHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCC GQDEEALDCFARAQACDPSLIAAILERSRLLLRLGRAEAAAGLMEDLLREAPGHPAARKH CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH LAWALIGQRKGAIARPQIHILLQSAPRAAELWTALSTALHQMGRLTTARLAARRARRLAP HHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC TDCDALRHGAALELEAGDLSATSELCHRLLHLAPTLPAAHIMAGFAHQASGRLVAAERHA CCHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEHHHH EQAIALAPKDAEAWRCLGHLRHHQNRLAEAEEALHNAHALAPGRGDVLGQLAWVLVMDDR HHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHEEEEECCC LPEALIVMRKACDLTPESAERALEQAEMLALAGRPAEAIIAATRARDLGPSPLAAQALLA CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHH RIHLSRGHIEAGDGDTAWAEAARCAATLLYRDPSHLAAAHVAVRLAAAGQPRAADLVALL HHHHCCCCEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHH PSALHRRVLREGLEWVTGFGNAREATRLTRATRAAFPEDRDLTIACLYLETMAGQAPAAD HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHCCCCCCHH TARQLRQWGLEHAQSWGPLPPRPRLAATPGRPLHVAYLASRYHHALLSGILATHDRAVVV HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCEEEE PHLYTDDAEALPPDLRSRVIVHPLGGVDLAASCAANGIDVVVDTVGLHPFHGQAEVLRFL EEEECCCCCCCCHHHHCCEEEECCCCCHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHH RRRLAPSQWGWFGGWGPGSGLFDGLITDTVALPAAADHHDEDILALAGGQWSWTPPAVAP HHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCC AIGPLPSAQTGIITFGCAVRGFRISRSCLETWADLLAGMDNARLMILGRQAHDWEFRAGF CCCCCCCCCCCEEEEEHHHHCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHH SRLLQACGIAPERVVYRFQQAYADHLHSFAGIDIALDTFPANGGLCLADALWMGVPVVTL HHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHCCCHHHH AGTGLLAERQGASLLAAADCGDWIARSPADYLAIARKLAGDRQDLALIRHTLRDRLGASP CCCCCEECCCCCCEEEECCCCHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC LLDARRITSQLEAAWLKARDAMAGITAAPDLKSRSQALAKRDLAVWLGRERSLTLPPSQG CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHEECCCCCEECCCCCC ADDAPDLSVVIVLYNQAGLSLRTLIALADQQGVRFETIIVDNASTDETPALLARVRGATL CCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHCCCCE LRNEDNIGFLRAANQGAAVARGKHIVFLNNDVFLHRDALAAALRRLRADPSIGVVGGRVV EECCCCCEEEEECCCCCCEECCCEEEEECCCEEEEHHHHHHHHHHHCCCCCEEEECCEEE LIDGSLQEAGCMVFNDGSTAGYGRGEDPNLAEFRFLREVDYVSGAFLMLPRALWRALGGF EEECCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EPALAPAYYEDTDLCLRVHRAGFRVVYDPAVVLTHVEGGSTVTSDAAAAMIRRNRGAFLA CCCCCCCCCCCHHHHHHHHHCCCEEEECCEEEEEEECCCCCCHHHHHHHHHHHCCCHHHH RHAEALRSRPSPAAARPLRDRWAPAPAPRVLVIDNGVPHSAGGAGNPRARLMIEALAGCH HHHHHHHCCCCCCCCCCHHHHCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCE VTFFPMWVRESDWAAVYRTLGAEVEVMLDQHATTLEDFLDHRQGLYDVLVVSRPPNMAIV EEEEEEEECCCHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHH KAIGRRRPDLLKGMRLVYDAEALFALRDIAQAAITARPLPRTEARRRLRDELDLAAGADT HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCH VLAVSRREARLFSAGGAAKVHLVSHALPAHPAPPGRDGRSGFLFLGALTPGSPNEDSLVW HEEHHHHHHHHCCCCCCEEEEEEHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHH LVESVLPALARRLPRPPPHLSILGECRSSRIAALAGEQVRLVGRVEDPAPWYDQAAVFVA HHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHCCCEEEEEEECCCCCCCCCCCEEEEE PTRFAAGIPLKVIEAAAAGLPVVATPLLARQLGWSTGDYLLAAGDAEGFAAAMAALYTDG CHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHCH ALWRRIRDGALARVSTENAPDRFRDTLREAVLGRGIG HHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure PDTPAFTLVAHLEAGDWDALRRALSQKETPASLLTQTLAEGRCPETPPPPGGAFLPSYS CCCCCEEEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHH LKRSLGDPSAVVARLCQIARETRAAGNDPLAADLYRTALAFDPRCAEASLALAWDSYARG HHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEHHHCCC DRCGAVDRAERAVQATPNDAEAATTLGWLYWEAGRGEAATRTLCAAVDRHPRQATAYWYL CCCCCHHHHHHHHCCCCCCHHHHHHHHEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHH GHICARQGRLAEAERLLRHALALAADTDAPNGEIAASLSWVLADLGRLDEALTLAHDTAR HHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC RDPAPRHLAHLGRLLTQKGEYEAALVLLDRATAERPGDWAATADLATALSRTGRGREALT CCCCHHHHHHHHHHHHCCCCCCEEEEEEEHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHH LIETALAAAPDERRLALRQATLLRDGGAHPQAALIAAQIVERWPDWGEGWFLRGQIKRDD HHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCC GQDEEALDCFARAQACDPSLIAAILERSRLLLRLGRAEAAAGLMEDLLREAPGHPAARKH CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH LAWALIGQRKGAIARPQIHILLQSAPRAAELWTALSTALHQMGRLTTARLAARRARRLAP HHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC TDCDALRHGAALELEAGDLSATSELCHRLLHLAPTLPAAHIMAGFAHQASGRLVAAERHA CCHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEHHHH EQAIALAPKDAEAWRCLGHLRHHQNRLAEAEEALHNAHALAPGRGDVLGQLAWVLVMDDR HHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHEEEEECCC LPEALIVMRKACDLTPESAERALEQAEMLALAGRPAEAIIAATRARDLGPSPLAAQALLA CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHH RIHLSRGHIEAGDGDTAWAEAARCAATLLYRDPSHLAAAHVAVRLAAAGQPRAADLVALL HHHHCCCCEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHH PSALHRRVLREGLEWVTGFGNAREATRLTRATRAAFPEDRDLTIACLYLETMAGQAPAAD HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHCCCCCCHH TARQLRQWGLEHAQSWGPLPPRPRLAATPGRPLHVAYLASRYHHALLSGILATHDRAVVV HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCEEEE PHLYTDDAEALPPDLRSRVIVHPLGGVDLAASCAANGIDVVVDTVGLHPFHGQAEVLRFL EEEECCCCCCCCHHHHCCEEEECCCCCHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHH RRRLAPSQWGWFGGWGPGSGLFDGLITDTVALPAAADHHDEDILALAGGQWSWTPPAVAP HHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCC AIGPLPSAQTGIITFGCAVRGFRISRSCLETWADLLAGMDNARLMILGRQAHDWEFRAGF CCCCCCCCCCCEEEEEHHHHCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHH SRLLQACGIAPERVVYRFQQAYADHLHSFAGIDIALDTFPANGGLCLADALWMGVPVVTL HHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHCCCHHHH AGTGLLAERQGASLLAAADCGDWIARSPADYLAIARKLAGDRQDLALIRHTLRDRLGASP CCCCCEECCCCCCEEEECCCCHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC LLDARRITSQLEAAWLKARDAMAGITAAPDLKSRSQALAKRDLAVWLGRERSLTLPPSQG CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHEECCCCCEECCCCCC ADDAPDLSVVIVLYNQAGLSLRTLIALADQQGVRFETIIVDNASTDETPALLARVRGATL CCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHCCCCE LRNEDNIGFLRAANQGAAVARGKHIVFLNNDVFLHRDALAAALRRLRADPSIGVVGGRVV EECCCCCEEEEECCCCCCEECCCEEEEECCCEEEEHHHHHHHHHHHCCCCCEEEECCEEE LIDGSLQEAGCMVFNDGSTAGYGRGEDPNLAEFRFLREVDYVSGAFLMLPRALWRALGGF EEECCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EPALAPAYYEDTDLCLRVHRAGFRVVYDPAVVLTHVEGGSTVTSDAAAAMIRRNRGAFLA CCCCCCCCCCCHHHHHHHHHCCCEEEECCEEEEEEECCCCCCHHHHHHHHHHHCCCHHHH RHAEALRSRPSPAAARPLRDRWAPAPAPRVLVIDNGVPHSAGGAGNPRARLMIEALAGCH HHHHHHHCCCCCCCCCCHHHHCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCE VTFFPMWVRESDWAAVYRTLGAEVEVMLDQHATTLEDFLDHRQGLYDVLVVSRPPNMAIV EEEEEEEECCCHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHH KAIGRRRPDLLKGMRLVYDAEALFALRDIAQAAITARPLPRTEARRRLRDELDLAAGADT HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCH VLAVSRREARLFSAGGAAKVHLVSHALPAHPAPPGRDGRSGFLFLGALTPGSPNEDSLVW HEEHHHHHHHHCCCCCCEEEEEEHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHH LVESVLPALARRLPRPPPHLSILGECRSSRIAALAGEQVRLVGRVEDPAPWYDQAAVFVA HHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHCCCEEEEEEECCCCCCCCCCCEEEEE PTRFAAGIPLKVIEAAAAGLPVVATPLLARQLGWSTGDYLLAAGDAEGFAAAMAALYTDG CHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHCH ALWRRIRDGALARVSTENAPDRFRDTLREAVLGRGIG HHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]