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The map label for this gene is glgC

Identifier: 83593581

GI number: 83593581

Start: 2608135

End: 2609406

Strand: Direct

Name: glgC

Synonym: Rru_A2246

Alternate gene names: 83593581

Gene position: 2608135-2609406 (Clockwise)

Preceding gene: 83593571

Following gene: 83593585

Centisome position: 59.92

GC content: 61.95

Gene sequence:

>1272_bases
ATGGACCAGATTACCGAATTTCAACTCGACATCAATCGGGCGTTGAAGGAAACGCTCGCCTTGGTCCTGGCGGGAGGCCG
CGGTTCGCGTTTGCGCGATCTGACCAATCGGGAATCAAAGCCCGCCGTTCCCTTTGGCGGCAAATACCGCATCATCGATT
TCCCGCTTTCGAACTGCATGAATTCCGGGATCCGCCGCATGTGCGTGATTACCCAGTACCGGGCCCATACCCTGATCCAT
CACATCCAGCGCGGCTGGGGCTTCCTGCGCGCCGAAATCGGCGAGTTCGTCGAGCTGTGGCCGGCCCAGCAGCAGACCGA
CAAGGAGAGCTGGTATCTGGGAACCGCCGACGCCGTCCACCAGAACCTTGATCTGATCCGCATGCATGATCCGCGCTTCG
TGCTGATCCTGGCGGGCGATCACATCTACAAGCAAGATTACTCGAAGCTTCTCGCCCACCACATCGCCCGGGGATCGGAT
TGCACGGTCGCTTGCGTCGACGTTCCGCGCGAAGAGGCCACCGGCTATGGCTGCGTCGAGGTCGACAACGACGACAACAT
CGTCCACTTCCTTGAAAAGCCGGCCAATCCGCCGGGCATCCCCGGCCGCCCCGACCGCGCCTTCGCCTCGATGGGCATCT
ATATCTTCAATGCCGATTTCCTCTACGAAATCCTTGAATCCGATGCGCTGAACGAAGCCAGCCAGCATGACTTCGGCCGC
GACATCATTCCCTCGCAGGTCGGCAAGGCGCGCATCGTCGCCCACCGCTTTTCCCAATCCTGCGTCTATTCGGTCGGCCG
CCGCGAACCCTATTGGCGCGACGTCGGCACCGTCGACGCGTACTGGTCGGCCAATATCGATCTGGTCAGCGTCACCCCGG
CCCTGGATCTGTACGACGCCGACTGGCCGATCTGGACCTATCAGATGCAGCGGCCGCCGGCGAAGTTCGTTTTCGACACC
GACGAGCGCCGGGGCATGGCCAAGGACAGCCTGGTTTCGGCGGGCTGCATCGTCTCGGGCGGCGCCGTGACCGGCTCCTT
GCTGTTCAACGACGTGCGGGTGAATTCCTATAGCTCGGTCATCGATACGGTGATCTTGCCGATGGGCGACATCGGCCGCC
ATGCCCGCCTGACCAAATGCATCCTCGATACCGGTTGTCGCATTCCCGAAGGGCTGGTCATCGGCGAGGATCCGATCCTC
GACGCCAAGCGCTTCCACGTCACCGAACAGGGCATCACCCTGGTCACGCCAGACCGCCTCGCCCTGCTCTAA

Upstream 100 bases:

>100_bases
GTGTTTTTAAAGGAAATGCCCGTGTCTTCCATTTGTCCGGTGCAAGCCTGGGGCGATCCTTCTATAGTCCGTTTCGAGTG
AAAATCATCAGGATACCGCC

Downstream 100 bases:

>100_bases
AATATCCGTGATGTTCAAGCGTGTTTTGGCATCCAAGGACGCCCTGCCTTAAGCAGGGCGTCCGTGAGTACGACCATCTT
TCGCATGGTAGCGGTTACGG

Product: glucose-1-phosphate adenylyltransferase

Products: NA

Alternate protein names: ADP-glucose pyrophosphorylase; ADPGlc PPase; ADP-glucose synthase

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MDQITEFQLDINRALKETLALVLAGGRGSRLRDLTNRESKPAVPFGGKYRIIDFPLSNCMNSGIRRMCVITQYRAHTLIH
HIQRGWGFLRAEIGEFVELWPAQQQTDKESWYLGTADAVHQNLDLIRMHDPRFVLILAGDHIYKQDYSKLLAHHIARGSD
CTVACVDVPREEATGYGCVEVDNDDNIVHFLEKPANPPGIPGRPDRAFASMGIYIFNADFLYEILESDALNEASQHDFGR
DIIPSQVGKARIVAHRFSQSCVYSVGRREPYWRDVGTVDAYWSANIDLVSVTPALDLYDADWPIWTYQMQRPPAKFVFDT
DERRGMAKDSLVSAGCIVSGGAVTGSLLFNDVRVNSYSSVIDTVILPMGDIGRHARLTKCILDTGCRIPEGLVIGEDPIL
DAKRFHVTEQGITLVTPDRLALL

Sequences:

>Translated_423_residues
MDQITEFQLDINRALKETLALVLAGGRGSRLRDLTNRESKPAVPFGGKYRIIDFPLSNCMNSGIRRMCVITQYRAHTLIH
HIQRGWGFLRAEIGEFVELWPAQQQTDKESWYLGTADAVHQNLDLIRMHDPRFVLILAGDHIYKQDYSKLLAHHIARGSD
CTVACVDVPREEATGYGCVEVDNDDNIVHFLEKPANPPGIPGRPDRAFASMGIYIFNADFLYEILESDALNEASQHDFGR
DIIPSQVGKARIVAHRFSQSCVYSVGRREPYWRDVGTVDAYWSANIDLVSVTPALDLYDADWPIWTYQMQRPPAKFVFDT
DERRGMAKDSLVSAGCIVSGGAVTGSLLFNDVRVNSYSSVIDTVILPMGDIGRHARLTKCILDTGCRIPEGLVIGEDPIL
DAKRFHVTEQGITLVTPDRLALL
>Mature_423_residues
MDQITEFQLDINRALKETLALVLAGGRGSRLRDLTNRESKPAVPFGGKYRIIDFPLSNCMNSGIRRMCVITQYRAHTLIH
HIQRGWGFLRAEIGEFVELWPAQQQTDKESWYLGTADAVHQNLDLIRMHDPRFVLILAGDHIYKQDYSKLLAHHIARGSD
CTVACVDVPREEATGYGCVEVDNDDNIVHFLEKPANPPGIPGRPDRAFASMGIYIFNADFLYEILESDALNEASQHDFGR
DIIPSQVGKARIVAHRFSQSCVYSVGRREPYWRDVGTVDAYWSANIDLVSVTPALDLYDADWPIWTYQMQRPPAKFVFDT
DERRGMAKDSLVSAGCIVSGGAVTGSLLFNDVRVNSYSSVIDTVILPMGDIGRHARLTKCILDTGCRIPEGLVIGEDPIL
DAKRFHVTEQGITLVTPDRLALL

Specific function: Glycogen biosynthesis; first step. [C]

COG id: COG0448

COG function: function code G; ADP-glucose pyrophosphorylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family

Homologues:

Organism=Escherichia coli, GI1789837, Length=407, Percent_Identity=57.4938574938575, Blast_Score=504, Evalue=1e-144,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GLGC_RHORT (Q2RS49)

Other databases:

- EMBL:   CP000230
- RefSeq:   YP_427333.1
- ProteinModelPortal:   Q2RS49
- SMR:   Q2RS49
- STRING:   Q2RS49
- GeneID:   3835674
- GenomeReviews:   CP000230_GR
- KEGG:   rru:Rru_A2246
- NMPDR:   fig|1085.1.peg.3723
- eggNOG:   COG0448
- HOGENOM:   HBG703946
- OMA:   GTVDAYW
- PhylomeDB:   Q2RS49
- ProtClustDB:   PRK00725
- BioCyc:   RRUB269796:RRU_A2246-MONOMER
- HAMAP:   MF_00624
- InterPro:   IPR005836
- InterPro:   IPR011831
- InterPro:   IPR023049
- InterPro:   IPR005835
- InterPro:   IPR011004
- TIGRFAMs:   TIGR02091

Pfam domain/function: PF00483 NTP_transferase; SSF51161 Trimer_LpxA_like

EC number: =2.7.7.27

Molecular weight: Translated: 47376; Mature: 47376

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: PS00808 ADP_GLC_PYROPHOSPH_1; PS00809 ADP_GLC_PYROPHOSPH_2; PS00810 ADP_GLC_PYROPHOSPH_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQITEFQLDINRALKETLALVLAGGRGSRLRDLTNRESKPAVPFGGKYRIIDFPLSNCM
CCCCHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHCCCCCCCCCCCCEEEEEECCHHHHH
NSGIRRMCVITQYRAHTLIHHIQRGWGFLRAEIGEFVELWPAQQQTDKESWYLGTADAVH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCHHHHH
QNLDLIRMHDPRFVLILAGDHIYKQDYSKLLAHHIARGSDCTVACVDVPREEATGYGCVE
CCCCEEEECCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHCCCCEEEE
VDNDDNIVHFLEKPANPPGIPGRPDRAFASMGIYIFNADFLYEILESDALNEASQHDFGR
ECCCCCEEEEEECCCCCCCCCCCCCHHHHHCCEEEEEHHHHHHHHHHHHCCHHHHHCCCC
DIIPSQVGKARIVAHRFSQSCVYSVGRREPYWRDVGTVDAYWSANIDLVSVTPALDLYDA
CCCHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCEEEEEECCCCEEECC
DWPIWTYQMQRPPAKFVFDTDERRGMAKDSLVSAGCIVSGGAVTGSLLFNDVRVNSYSSV
CCCEEEEEECCCCCCEEEECHHHCCCCHHHHHHCCCEEECCCEEEEEEEEEEECCHHHHH
IDTVILPMGDIGRHARLTKCILDTGCRIPEGLVIGEDPILDAKRFHVTEQGITLVTPDRL
HHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCEEECCCCCCCCHHEEEECCCEEEECCCHH
ALL
HCC
>Mature Secondary Structure
MDQITEFQLDINRALKETLALVLAGGRGSRLRDLTNRESKPAVPFGGKYRIIDFPLSNCM
CCCCHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHCCCCCCCCCCCCEEEEEECCHHHHH
NSGIRRMCVITQYRAHTLIHHIQRGWGFLRAEIGEFVELWPAQQQTDKESWYLGTADAVH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCHHHHH
QNLDLIRMHDPRFVLILAGDHIYKQDYSKLLAHHIARGSDCTVACVDVPREEATGYGCVE
CCCCEEEECCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHCCCCEEEE
VDNDDNIVHFLEKPANPPGIPGRPDRAFASMGIYIFNADFLYEILESDALNEASQHDFGR
ECCCCCEEEEEECCCCCCCCCCCCCHHHHHCCEEEEEHHHHHHHHHHHHCCHHHHHCCCC
DIIPSQVGKARIVAHRFSQSCVYSVGRREPYWRDVGTVDAYWSANIDLVSVTPALDLYDA
CCCHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCEEEEEECCCCEEECC
DWPIWTYQMQRPPAKFVFDTDERRGMAKDSLVSAGCIVSGGAVTGSLLFNDVRVNSYSSV
CCCEEEEEECCCCCCEEEECHHHCCCCHHHHHHCCCEEECCCEEEEEEEEEEECCHHHHH
IDTVILPMGDIGRHARLTKCILDTGCRIPEGLVIGEDPILDAKRFHVTEQGITLVTPDRL
HHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCEEECCCCCCCCHHEEEECCCEEEECCCHH
ALL
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA