Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
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Accession | NC_007643 |
Length | 4,352,825 |
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The map label for this gene is 83593571
Identifier: 83593571
GI number: 83593571
Start: 2596824
End: 2597645
Strand: Direct
Name: 83593571
Synonym: Rru_A2236
Alternate gene names: NA
Gene position: 2596824-2597645 (Clockwise)
Preceding gene: 83593568
Following gene: 83593581
Centisome position: 59.66
GC content: 66.55
Gene sequence:
>822_bases ATGAAGATCGTCGTGCATGTGGATGGCGGAGAAGCTTGGCCGCGCCGCGCCGAAGCCGCGGCGCGCATCGTGTCGACCAG GGGGGGCGGACGGGTGCTCGGCCTGTTCGGCCAAACGGCAAGCGCCCTGCCCAGTTACTCCATTCATGGCGACAAGGAGG GCATCGACCGCGACGCCCAGCCCCAGCGCGACCGCTTTGAAAGCCTGATGGCAAATTATCCCGACGTTTCGGCCGAATGG CACACCATCCATTCCCTGAACCCGGGCTTCATCGTCAGCGAAATCACCGCCAACGCCCAATTCGCCGATCTGACGGTGCT GGGTCAGGTCGATCCCCGCGCCATCCCCGAACGCCTGCCCAACGATCTGGCCGAGCAGGTGGTGTTGAACTGCGGGCGGC CGATCTTGCTCATCCCCTATGCCGGAACCTTCGAGTATACGTTCGAGCGGGTGGTGATCGCCTATAACGACAGCCGGGAA TCCAGCCGCGCCGTCGGCGACGCCCTGCCCTTCCTCGACGGGGCCGAGGCGCGGGTCATCGTTATCCGCCATTCCCCCGA ACCGACCGAGGGGGATAGCTGGCGCTGGCGCGAGCTTGCCCGCCGGCTGGAGGAACACGGCCTGCGCCGGGTCGTCGTCG AAACCCCGGTGCTGAACCAGATCGGGGTGGCCGATTTCCTGCTTTCCCAGGCCGCCGACAGCGCCGCCCAGCTTCTGGTC ATGGGCGCTTACGGCAAGCTGGGCCTGCCCCGCATGCTGCGCGGCAGCGTCACCCGCGACATCCTGCGCCAGATGACCCT GCCGGTGTTCCTCGGCCATTAA
Upstream 100 bases:
>100_bases TCACGCTTGCGCCACGCTGACCAGTCTCTCCCTCGGGTAAAATCGGCTCGAAGCCAGGAACCGGGGTCGGGGAGCGGGAT AGGGATCGGAGGAGACGGGC
Downstream 100 bases:
>100_bases AACCAAGGCCTTCGTCCGAGGGGGACCGACAAGGGCCGCCCTCGGGCGCGGACTCACAGATAGCCCAAAGCCCGCGGCAG CCACAGGGTGAGTTCGGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: UspA Domain Protein; Universal Stress Protein; Universal Stress Protein UspA; Universal Stress Protein Family Protein; Universal Stress Protein Family; Universal Stress Protein Family Domain Protein
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MKIVVHVDGGEAWPRRAEAAARIVSTRGGGRVLGLFGQTASALPSYSIHGDKEGIDRDAQPQRDRFESLMANYPDVSAEW HTIHSLNPGFIVSEITANAQFADLTVLGQVDPRAIPERLPNDLAEQVVLNCGRPILLIPYAGTFEYTFERVVIAYNDSRE SSRAVGDALPFLDGAEARVIVIRHSPEPTEGDSWRWRELARRLEEHGLRRVVVETPVLNQIGVADFLLSQAADSAAQLLV MGAYGKLGLPRMLRGSVTRDILRQMTLPVFLGH
Sequences:
>Translated_273_residues MKIVVHVDGGEAWPRRAEAAARIVSTRGGGRVLGLFGQTASALPSYSIHGDKEGIDRDAQPQRDRFESLMANYPDVSAEW HTIHSLNPGFIVSEITANAQFADLTVLGQVDPRAIPERLPNDLAEQVVLNCGRPILLIPYAGTFEYTFERVVIAYNDSRE SSRAVGDALPFLDGAEARVIVIRHSPEPTEGDSWRWRELARRLEEHGLRRVVVETPVLNQIGVADFLLSQAADSAAQLLV MGAYGKLGLPRMLRGSVTRDILRQMTLPVFLGH >Mature_273_residues MKIVVHVDGGEAWPRRAEAAARIVSTRGGGRVLGLFGQTASALPSYSIHGDKEGIDRDAQPQRDRFESLMANYPDVSAEW HTIHSLNPGFIVSEITANAQFADLTVLGQVDPRAIPERLPNDLAEQVVLNCGRPILLIPYAGTFEYTFERVVIAYNDSRE SSRAVGDALPFLDGAEARVIVIRHSPEPTEGDSWRWRELARRLEEHGLRRVVVETPVLNQIGVADFLLSQAADSAAQLLV MGAYGKLGLPRMLRGSVTRDILRQMTLPVFLGH
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30084; Mature: 30084
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIVVHVDGGEAWPRRAEAAARIVSTRGGGRVLGLFGQTASALPSYSIHGDKEGIDRDAQ CEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEECCHHHHCCCCCCCCCCCCCCCCCC PQRDRFESLMANYPDVSAEWHTIHSLNPGFIVSEITANAQFADLTVLGQVDPRAIPERLP CHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEEECCCEEEEEEEEECCCCHHHHHHCH NDLAEQVVLNCGRPILLIPYAGTFEYTFERVVIAYNDSRESSRAVGDALPFLDGAEARVI HHHHHHHHHHCCCCEEEEECCCCEEEEEEEEEEEECCCCCHHHHHHHHCCCCCCCCEEEE VIRHSPEPTEGDSWRWRELARRLEEHGLRRVVVETPVLNQIGVADFLLSQAADSAAQLLV EEECCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHEEEE MGAYGKLGLPRMLRGSVTRDILRQMTLPVFLGH EECCCCCCCCHHHHHHHHHHHHHHHCCCCEECC >Mature Secondary Structure MKIVVHVDGGEAWPRRAEAAARIVSTRGGGRVLGLFGQTASALPSYSIHGDKEGIDRDAQ CEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEECCHHHHCCCCCCCCCCCCCCCCCC PQRDRFESLMANYPDVSAEWHTIHSLNPGFIVSEITANAQFADLTVLGQVDPRAIPERLP CHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEEECCCEEEEEEEEECCCCHHHHHHCH NDLAEQVVLNCGRPILLIPYAGTFEYTFERVVIAYNDSRESSRAVGDALPFLDGAEARVI HHHHHHHHHHCCCCEEEEECCCCEEEEEEEEEEEECCCCCHHHHHHHHCCCCCCCCEEEE VIRHSPEPTEGDSWRWRELARRLEEHGLRRVVVETPVLNQIGVADFLLSQAADSAAQLLV EEECCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHEEEE MGAYGKLGLPRMLRGSVTRDILRQMTLPVFLGH EECCCCCCCCHHHHHHHHHHHHHHHCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA