| Definition | Staphylococcus aureus RF122, complete genome. |
|---|---|
| Accession | NC_007622 |
| Length | 2,742,531 |
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The map label for this gene is 82751105
Identifier: 82751105
GI number: 82751105
Start: 1499878
End: 1501203
Strand: Reverse
Name: 82751105
Synonym: SAB1373c
Alternate gene names: NA
Gene position: 1501203-1499878 (Counterclockwise)
Preceding gene: 82751106
Following gene: 82751104
Centisome position: 54.74
GC content: 28.81
Gene sequence:
>1326_bases ATGATAACCTTTAAAAATAATTTGAATTATAATCTGTATAGACAAAACTTATTAGGCGGAAATGTAGCAGGTATTTGGAA AGATAACAGCTTTTTCTTAGGTTTAAATTCATATCCAATTATGAATTATCATTATGTCACAGCCCAATTTAATAATTTTG AAAAAAACTTTTTAAGTGAAGATTTCAAAGTGAATTATCATTTAAGTGGTTACGGCATTCATTATAATGAAGCACTAGCG TCATTCTTAGGAGAAAGTTCAGAAAGATATGCTTTTACGCTGTTGTATCAAAATTTAAAAAGAAAAATCATATATGCGTC ACATGCACAAATTTCAGAACAACTAAAAAATTCAAATAGCTTAATATTACCTTTAAATTTAATCAATACATATTTTGAGG AAAAAGACTCTAAACATTATATTTGTGAAGATGATGTCATTCAATGGATTCCACTTAAATCTCTGTATCACCCAGACCGT GATGTTTTAATACCTTTACAAATGCTTGTTCTATTTGATAAAACGATATTTAAAGATGAAAAGCAGTTTACGAATAGTGG TGTTTCAACTGGTACAGCTAGTCATGAAACATTTGAAAAAAGTTTAACCAATTCTATTATTGAGATTTTACAAATAGATT CATACAATTTGTGGTGGTACGGATGCATTGAAGGAAAGGCGATTTCTGTAAATATTGCTGAAAAACTAAATGAATGGTTT AAACGGGAAAGCATTGTGCACAAATTTCTTGATAATTTTGATGTATCCTTCACTGATATTAGCTTTGATAAGCCAATTCA TGTTGTTGTCTGTGAGGTTAAATCTAAAGCTAAAGATTTAAGCTTGCCTAAATATGTTGTTGGAGTTCAAGGTGATACGA ACTTAGAACAGTGTATCTATAGAAGCTTATTAGAATGTGTTACCGTGTTAGAGTATACAATGACTGAAGTTTGGAGTAAT ACTACACATTTTAAGAACATCTCAGAAAATATTAAAAATCATCCTATTGATAATTTAGATGATAATGTTATGTATTATGC TAAATATGGTTTGAATTTTAATATGCATAAAAGAAAAATCACCTTCCAAAATATTAAAAACGCCAAAAATTTACATGAGA TCATCAATGAGTTAAAACATTTAAGTTATTATGCATGTTATTTAGATATTACGCCCGTGGAATTCTATAATAAAAATTTA GTTGTCGTTAGAACTTTTATACCTGAATTATTGACGATAGCTCTACCATCATATCCACCTTATCTGCATCCAAGATATAA AGAAATAGGGGGAATAATAAATGATATTCCACATCCTTTGGCATAG
Upstream 100 bases:
>100_bases AAGAGACAGTCTACTTGTTCGACATGTTCGACGATAAATAATGTTTTGTTTAAAGAGCAAAATATAAAGTCAGCTAATAT TTTAAAAAGGGTGTTAGAAA
Downstream 100 bases:
>100_bases CCTGATTGGTCTAATGTTTTTTCTAACTTGCTTCCCAGGTATATTGCTTATTTGCATTAGAAAAGTACCGTATTTTAAAT ACCCAACTGAATTTCACAAG
Product: streptolysin-associated protein SagD-like protein
Products: NA
Alternate protein names: Streptolysin S Biosynthesis Protein; Streptolysin S Biosynthesis Protein D; YcaO-Like Protein
Number of amino acids: Translated: 441; Mature: 441
Protein sequence:
>441_residues MITFKNNLNYNLYRQNLLGGNVAGIWKDNSFFLGLNSYPIMNYHYVTAQFNNFEKNFLSEDFKVNYHLSGYGIHYNEALA SFLGESSERYAFTLLYQNLKRKIIYASHAQISEQLKNSNSLILPLNLINTYFEEKDSKHYICEDDVIQWIPLKSLYHPDR DVLIPLQMLVLFDKTIFKDEKQFTNSGVSTGTASHETFEKSLTNSIIEILQIDSYNLWWYGCIEGKAISVNIAEKLNEWF KRESIVHKFLDNFDVSFTDISFDKPIHVVVCEVKSKAKDLSLPKYVVGVQGDTNLEQCIYRSLLECVTVLEYTMTEVWSN TTHFKNISENIKNHPIDNLDDNVMYYAKYGLNFNMHKRKITFQNIKNAKNLHEIINELKHLSYYACYLDITPVEFYNKNL VVVRTFIPELLTIALPSYPPYLHPRYKEIGGIINDIPHPLA
Sequences:
>Translated_441_residues MITFKNNLNYNLYRQNLLGGNVAGIWKDNSFFLGLNSYPIMNYHYVTAQFNNFEKNFLSEDFKVNYHLSGYGIHYNEALA SFLGESSERYAFTLLYQNLKRKIIYASHAQISEQLKNSNSLILPLNLINTYFEEKDSKHYICEDDVIQWIPLKSLYHPDR DVLIPLQMLVLFDKTIFKDEKQFTNSGVSTGTASHETFEKSLTNSIIEILQIDSYNLWWYGCIEGKAISVNIAEKLNEWF KRESIVHKFLDNFDVSFTDISFDKPIHVVVCEVKSKAKDLSLPKYVVGVQGDTNLEQCIYRSLLECVTVLEYTMTEVWSN TTHFKNISENIKNHPIDNLDDNVMYYAKYGLNFNMHKRKITFQNIKNAKNLHEIINELKHLSYYACYLDITPVEFYNKNL VVVRTFIPELLTIALPSYPPYLHPRYKEIGGIINDIPHPLA >Mature_441_residues MITFKNNLNYNLYRQNLLGGNVAGIWKDNSFFLGLNSYPIMNYHYVTAQFNNFEKNFLSEDFKVNYHLSGYGIHYNEALA SFLGESSERYAFTLLYQNLKRKIIYASHAQISEQLKNSNSLILPLNLINTYFEEKDSKHYICEDDVIQWIPLKSLYHPDR DVLIPLQMLVLFDKTIFKDEKQFTNSGVSTGTASHETFEKSLTNSIIEILQIDSYNLWWYGCIEGKAISVNIAEKLNEWF KRESIVHKFLDNFDVSFTDISFDKPIHVVVCEVKSKAKDLSLPKYVVGVQGDTNLEQCIYRSLLECVTVLEYTMTEVWSN TTHFKNISENIKNHPIDNLDDNVMYYAKYGLNFNMHKRKITFQNIKNAKNLHEIINELKHLSYYACYLDITPVEFYNKNL VVVRTFIPELLTIALPSYPPYLHPRYKEIGGIINDIPHPLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51433; Mature: 51433
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITFKNNLNYNLYRQNLLGGNVAGIWKDNSFFLGLNSYPIMNYHYVTAQFNNFEKNFLSE CEEECCCCCEEEEEHHCCCCCEEEEEECCCEEEECCCCCEEEEEEEEEEECCCHHHHCCC DFKVNYHLSGYGIHYNEALASFLGESSERYAFTLLYQNLKRKIIYASHAQISEQLKNSNS CCEEEEEEEECCEEHHHHHHHHHCCCCCCEEHHHHHHHHHHHEEEEHHHHHHHHHCCCCC LILPLNLINTYFEEKDSKHYICEDDVIQWIPLKSLYHPDRDVLIPLQMLVLFDKTIFKDE EEEEHHHHHHHHHCCCCCCEECCCCCEEEECCHHHCCCCCCHHHHHHHHHHHHHHHHCCH KQFTNSGVSTGTASHETFEKSLTNSIIEILQIDSYNLWWYGCIEGKAISVNIAEKLNEWF HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEEHHHHHHHHH KRESIVHKFLDNFDVSFTDISFDKPIHVVVCEVKSKAKDLSLPKYVVGVQGDTNLEQCIY HHHHHHHHHHHCCCCEEEEECCCCCEEEEEEEEHHCCCCCCCCEEEEECCCCCCHHHHHH RSLLECVTVLEYTMTEVWSNTTHFKNISENIKNHPIDNLDDNVMYYAKYGLNFNMHKRKI HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCEEEEHEEE TFQNIKNAKNLHEIINELKHLSYYACYLDITPVEFYNKNLVVVRTFIPELLTIALPSYPP EHHHHHCHHHHHHHHHHHHHCEEEEEEEEECCHHHHCCCEEEEHHHHHHHHHHHCCCCCC YLHPRYKEIGGIINDIPHPLA CCCCCHHHHCCHHHCCCCCCC >Mature Secondary Structure MITFKNNLNYNLYRQNLLGGNVAGIWKDNSFFLGLNSYPIMNYHYVTAQFNNFEKNFLSE CEEECCCCCEEEEEHHCCCCCEEEEEECCCEEEECCCCCEEEEEEEEEEECCCHHHHCCC DFKVNYHLSGYGIHYNEALASFLGESSERYAFTLLYQNLKRKIIYASHAQISEQLKNSNS CCEEEEEEEECCEEHHHHHHHHHCCCCCCEEHHHHHHHHHHHEEEEHHHHHHHHHCCCCC LILPLNLINTYFEEKDSKHYICEDDVIQWIPLKSLYHPDRDVLIPLQMLVLFDKTIFKDE EEEEHHHHHHHHHCCCCCCEECCCCCEEEECCHHHCCCCCCHHHHHHHHHHHHHHHHCCH KQFTNSGVSTGTASHETFEKSLTNSIIEILQIDSYNLWWYGCIEGKAISVNIAEKLNEWF HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEEHHHHHHHHH KRESIVHKFLDNFDVSFTDISFDKPIHVVVCEVKSKAKDLSLPKYVVGVQGDTNLEQCIY HHHHHHHHHHHCCCCEEEEECCCCCEEEEEEEEHHCCCCCCCCEEEEECCCCCCHHHHHH RSLLECVTVLEYTMTEVWSNTTHFKNISENIKNHPIDNLDDNVMYYAKYGLNFNMHKRKI HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCEEEEHEEE TFQNIKNAKNLHEIINELKHLSYYACYLDITPVEFYNKNLVVVRTFIPELLTIALPSYPP EHHHHHCHHHHHHHHHHHHHCEEEEEEEEECCHHHHCCCEEEEHHHHHHHHHHHCCCCCC YLHPRYKEIGGIINDIPHPLA CCCCCHHHHCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA