| Definition | Staphylococcus aureus RF122, complete genome. |
|---|---|
| Accession | NC_007622 |
| Length | 2,742,531 |
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The map label for this gene is ypjH [H]
Identifier: 82751057
GI number: 82751057
Start: 1451005
End: 1452147
Strand: Reverse
Name: ypjH [H]
Synonym: SAB1322c
Alternate gene names: 82751057
Gene position: 1452147-1451005 (Counterclockwise)
Preceding gene: 82751058
Following gene: 82751056
Centisome position: 52.95
GC content: 32.81
Gene sequence:
>1143_bases ATGAAGATAGGTATAACATGTTACCCGTCCATGGGTGGTTCTGGAATTATTGCCACAGAATTAGGAATTAAATTAGCAGA GCGAGGTCACGAAGTACATTTTATCACTTCAAATATCCCGTTTAGAATAAGAAAACCACTACCGAATATGATTTTTCATC AAGTTGAAGTGAATCAATATGCAGTATTTCAATATCCACCGTATGATATTACGTTAAGTACTAAAATCGCTGAAGTTATT AAAGAATATGATCTTGATTTGTTGCATATGCACTATGCTGTACCTCATGCAATTTGTGGTATTTTAGCTCGTGAGATGTC AGGTAAAGATATAAAAATTATGACAACGCTACACGGTACTGATATTACTGTTTTGGGCTATGATCATTCACTCCAAGGTG CAATTAAATTTGGTATTGAAAAAAGTGATATTGTAACAAGTGTGAGTAAATCTTTAGCGCAAGAAACACATGAAATTATT GAAACTAACAAAGAGATTATACCGATTTATAATTTTGTACGTGAAAATGAGTTTCCAACTAAACATAACACAAAATTAAA ATCACAATTTGGTATAGCACCAGATGAAAAAGTGTTAATACATGTATCGAATTTTAGACAAGTAAAACGCATAGATACTA TTATAGAAACATTTGCAAAAGTACGTGAAAAGATACCTAGTAAATTAATTTTACTTGGAGATGGTCCTGAATTAGTGCCA ATGCGTCAATTGACGAAAGAGTTAAACGTAGAAGAGGATGTTTTATTTTTAGGGAAACAAGATTGCGTAAGTGAATTTTA CCAATTATCTGACTTAGTATTATTATTAAGTGAAAAAGAAAGCTTTGGACTAACTTTACTTGAGGCTATGAAAACAGGCG TCGTTCCAATTGGTTCAAATGCCGGTGGAATTAAAGAGGTTATTAAACATGGTGAAACTGGATTTGTCGTAGATGTGGGT GATTGTGATTCAGCGAGTGACTATGCAATCCGATTACTTGAAGATAAGGTGTTATACAACAAACTTCAGAAAAACATGCT AGCAGATATTGCTGAACGTTTTGGATCAGAACTCATTACAGATCAATATGAGTATTATTATCAAAAAATGCTAAATGAGC ATAACAAAAGTAAAGGCGAGTAA
Upstream 100 bases:
>100_bases CAACATTACTATAAACTTAAATTGTAAAATTAAATTTAAACAATTATCTACGCATCGAGAATAATAGAAAAAGAAATAGA AAGAAAGGATGGGCAAGCGA
Downstream 100 bases:
>100_bases TAATATGGATAAATCATTATTTGAACAGGCAAGGCCTATATTAGAACAAATTCAAGACAATGGTTTTGAAGCATATTATG TAGGTGGCTCTGTAAGAGAT
Product: glycosyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 380; Mature: 380
Protein sequence:
>380_residues MKIGITCYPSMGGSGIIATELGIKLAERGHEVHFITSNIPFRIRKPLPNMIFHQVEVNQYAVFQYPPYDITLSTKIAEVI KEYDLDLLHMHYAVPHAICGILAREMSGKDIKIMTTLHGTDITVLGYDHSLQGAIKFGIEKSDIVTSVSKSLAQETHEII ETNKEIIPIYNFVRENEFPTKHNTKLKSQFGIAPDEKVLIHVSNFRQVKRIDTIIETFAKVREKIPSKLILLGDGPELVP MRQLTKELNVEEDVLFLGKQDCVSEFYQLSDLVLLLSEKESFGLTLLEAMKTGVVPIGSNAGGIKEVIKHGETGFVVDVG DCDSASDYAIRLLEDKVLYNKLQKNMLADIAERFGSELITDQYEYYYQKMLNEHNKSKGE
Sequences:
>Translated_380_residues MKIGITCYPSMGGSGIIATELGIKLAERGHEVHFITSNIPFRIRKPLPNMIFHQVEVNQYAVFQYPPYDITLSTKIAEVI KEYDLDLLHMHYAVPHAICGILAREMSGKDIKIMTTLHGTDITVLGYDHSLQGAIKFGIEKSDIVTSVSKSLAQETHEII ETNKEIIPIYNFVRENEFPTKHNTKLKSQFGIAPDEKVLIHVSNFRQVKRIDTIIETFAKVREKIPSKLILLGDGPELVP MRQLTKELNVEEDVLFLGKQDCVSEFYQLSDLVLLLSEKESFGLTLLEAMKTGVVPIGSNAGGIKEVIKHGETGFVVDVG DCDSASDYAIRLLEDKVLYNKLQKNMLADIAERFGSELITDQYEYYYQKMLNEHNKSKGE >Mature_380_residues MKIGITCYPSMGGSGIIATELGIKLAERGHEVHFITSNIPFRIRKPLPNMIFHQVEVNQYAVFQYPPYDITLSTKIAEVI KEYDLDLLHMHYAVPHAICGILAREMSGKDIKIMTTLHGTDITVLGYDHSLQGAIKFGIEKSDIVTSVSKSLAQETHEII ETNKEIIPIYNFVRENEFPTKHNTKLKSQFGIAPDEKVLIHVSNFRQVKRIDTIIETFAKVREKIPSKLILLGDGPELVP MRQLTKELNVEEDVLFLGKQDCVSEFYQLSDLVLLLSEKESFGLTLLEAMKTGVVPIGSNAGGIKEVIKHGETGFVVDVG DCDSASDYAIRLLEDKVLYNKLQKNMLADIAERFGSELITDQYEYYYQKMLNEHNKSKGE
Specific function: Adds A Galactose Goup To A Glucose Group Of Lps. [C]
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 - InterPro: IPR016040 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: 2.4.1.- [C]
Molecular weight: Translated: 42853; Mature: 42853
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIGITCYPSMGGSGIIATELGIKLAERGHEVHFITSNIPFRIRKPLPNMIFHQVEVNQY CEEEEEEECCCCCCEEEEHHHHHHHHHCCCEEEEEECCCCEEECCCCHHHHHEEEECCCE AVFQYPPYDITLSTKIAEVIKEYDLDLLHMHYAVPHAICGILAREMSGKDIKIMTTLHGT EEEEECCCCEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCC DITVLGYDHSLQGAIKFGIEKSDIVTSVSKSLAQETHEIIETNKEIIPIYNFVRENEFPT EEEEEECCCCCCCHHEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHCCCCCC KHNTKLKSQFGIAPDEKVLIHVSNFRQVKRIDTIIETFAKVREKIPSKLILLGDGPELVP CCCCCHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCH MRQLTKELNVEEDVLFLGKQDCVSEFYQLSDLVLLLSEKESFGLTLLEAMKTGVVPIGSN HHHHHHHCCCCHHHEEECCHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHCCCEEECCC AGGIKEVIKHGETGFVVDVGDCDSASDYAIRLLEDKVLYNKLQKNMLADIAERFGSELIT CCHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH DQYEYYYQKMLNEHNKSKGE HHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKIGITCYPSMGGSGIIATELGIKLAERGHEVHFITSNIPFRIRKPLPNMIFHQVEVNQY CEEEEEEECCCCCCEEEEHHHHHHHHHCCCEEEEEECCCCEEECCCCHHHHHEEEECCCE AVFQYPPYDITLSTKIAEVIKEYDLDLLHMHYAVPHAICGILAREMSGKDIKIMTTLHGT EEEEECCCCEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCC DITVLGYDHSLQGAIKFGIEKSDIVTSVSKSLAQETHEIIETNKEIIPIYNFVRENEFPT EEEEEECCCCCCCHHEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHCCCCCC KHNTKLKSQFGIAPDEKVLIHVSNFRQVKRIDTIIETFAKVREKIPSKLILLGDGPELVP CCCCCHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCH MRQLTKELNVEEDVLFLGKQDCVSEFYQLSDLVLLLSEKESFGLTLLEAMKTGVVPIGSN HHHHHHHCCCCHHHEEECCHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHCCCEEECCC AGGIKEVIKHGETGFVVDVGDCDSASDYAIRLLEDKVLYNKLQKNMLADIAERFGSELIT CCHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH DQYEYYYQKMLNEHNKSKGE HHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Glycosyltransferases; Hexosyltransferases [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8760912; 9384377 [H]