| Definition | Staphylococcus aureus RF122, complete genome. |
|---|---|
| Accession | NC_007622 |
| Length | 2,742,531 |
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The map label for this gene is ebh [H]
Identifier: 82751026
GI number: 82751026
Start: 1408971
End: 1410803
Strand: Reverse
Name: ebh [H]
Synonym: SAB1290c
Alternate gene names: 82751026
Gene position: 1410803-1408971 (Counterclockwise)
Preceding gene: 82751027
Following gene: 82751025
Centisome position: 51.44
GC content: 36.39
Gene sequence:
>1833_bases TTGACGCCTGATACAGTAACACAAGCAGTTACAACTATGAATCAAGCGAAAGATGCATTAAACGGTGATGAAAAATTAGC GCAAGCGAAACAGGATGCTTTAGCAAATCTTGATACGTTACGCGATTTAAATCAACCACAACGTGATGCGTTACGTAATC AAATCAACCAAGCACAAGCGTTAGCTACAGTTGAACAAACTAAACAAAATGCACAAAATGTGAATACAGCAATGGGTAAC TTGAAACAAGGTATTGCGAATAAAGATACCGTCAAAGCAAGTGAGAACTATCATGATGCTGATGCCGATAAGCAAACAGC ATATACAAATGCAGTGTCTCAAGCGGAAGGTATTATCAATCAAACGACAAATCCAACGCTTAACCCAGATGAAATAACAC GTGCATTAACTCAAGTCACTGATGCTAAAAATGGCTTAAACGGTGAAGCTAAATTGGCAACTGAAAAGCAAAATGCTAAA GATGCTGTCAATGCAATGACGCATTTAAACGATGCTCAAAAACAAGCATTAAAAGGTCAAATCGATCAATCGCCTGAAAT TGCGACAGTGAACCAAGTTAAACAAACAGCAACGAGCCTAGATCAAGCAATGAATCAATTATCACAAGCTATTAATGATA AGACTCAAACATTAGCGGACGGTAATTACTTAAATGCAGATCCTGACAAACAAAATGCGTATAAACAGGCAGTAGCAAAA GCTGAAGCATTATTGAATAAACAAAGTGGTACTAATGAAGTACAAGCCCAAGTTGAAAGCATCACTAATGAAGTGAACGC AGCGAAACAAGCATTAAATGGTAATGATAATTTAGCGAATGCTAAGCAACAAGTGAAACAACAACTGGCGAATCTAACAC ACTTAAATGATGCACAAAAACAATCAGTTGAAAGTCAAATTACTCAAGCGTTAGATCATGCAATGGAATTATTAAGAAAT AGTATTGCGGATAACCAAGCGACATTAGCGTCTGAAGATTATCATGATGCAACTGCGCAAAGACAAAATGACTATAACCA AGCTGTAACAGCTGCTAAAAACATCATTAATCAAACAACGTCACCTACGATGATTCCAGATGAAGTTAATCGTGCAACTA CACAAGTGAATAACACGAAAGTTGCATTAGATGGTGATGAAAACCTTGTAGCAGCTAAACAACAAGCAAACAACAGACTT AATCAATTAGATCATTTGAATAATGCGCAAAAGCAACAGTTACAATCACAAATTACGCAATCATCTGATATTGCTACAGT TAATGGTCACAAGCAAACAGCAGAATCTTTAAATACAGCAATGGGTAACTTAATTAATGCGATTGCAGATCATCAAGCCG TTGAACAACGTGGTAACTTCATCAATGCTGATACTGATAAACAAACTGCTTATACTACAGCGGTAAATGAAGCAGAAGCA TTGATTAACAAACAAACTGGTCAAAATGCGAACCAATCAGAAGTAGAACAAGCTATTACTAAAGTTCAAACTACACTTCA AGCGTTAAATGGAGATCATAATTTACAAGTTGCTAAAACAAATGCGACGCAAGCAATTGATGCTTTAACAAGCTTAAATG ATCCTCAAAAAACAGCATTAAAAGACCAAGTTACTGCTGCAACTTTAGTAACTGCAGTTCATCAAATTGAACAAAATGCG AATACGCTTAACCTAGCAATGCATGGCTTAAGAGAAAGTATTCAAGATAACGCAGCAACTAAAGCAAATAGCAAATATAT CAACGAAGATCAACCAGAGCAACAAAACTACGATCAAGCAGTGCAAGCTGCAAATAACATTATCAATGAGTAA
Upstream 100 bases:
>100_bases GTACTGCAACGATTAAAAATGGCACAGCAATGCCTACTAATTTAGCTGGTGGTAGCACAACCAAGCGCAACAAATCGCAA ATGGCACACCAACACCTGTA
Downstream 100 bases:
>100_bases ACAGCGACATTAGATAATAATGCGATTAATCAAGCAGCGACAACGGTGAATACAACGAAAGCAGCATTACATGGTGATGT GAAGTTACAAAATGATAAAG
Product: truncated cell surface fibronectin-binding protein
Products: NA
Alternate protein names: ECM-binding protein homolog [H]
Number of amino acids: Translated: 610; Mature: 609
Protein sequence:
>610_residues MTPDTVTQAVTTMNQAKDALNGDEKLAQAKQDALANLDTLRDLNQPQRDALRNQINQAQALATVEQTKQNAQNVNTAMGN LKQGIANKDTVKASENYHDADADKQTAYTNAVSQAEGIINQTTNPTLNPDEITRALTQVTDAKNGLNGEAKLATEKQNAK DAVNAMTHLNDAQKQALKGQIDQSPEIATVNQVKQTATSLDQAMNQLSQAINDKTQTLADGNYLNADPDKQNAYKQAVAK AEALLNKQSGTNEVQAQVESITNEVNAAKQALNGNDNLANAKQQVKQQLANLTHLNDAQKQSVESQITQALDHAMELLRN SIADNQATLASEDYHDATAQRQNDYNQAVTAAKNIINQTTSPTMIPDEVNRATTQVNNTKVALDGDENLVAAKQQANNRL NQLDHLNNAQKQQLQSQITQSSDIATVNGHKQTAESLNTAMGNLINAIADHQAVEQRGNFINADTDKQTAYTTAVNEAEA LINKQTGQNANQSEVEQAITKVQTTLQALNGDHNLQVAKTNATQAIDALTSLNDPQKTALKDQVTAATLVTAVHQIEQNA NTLNLAMHGLRESIQDNAATKANSKYINEDQPEQQNYDQAVQAANNIINE
Sequences:
>Translated_610_residues MTPDTVTQAVTTMNQAKDALNGDEKLAQAKQDALANLDTLRDLNQPQRDALRNQINQAQALATVEQTKQNAQNVNTAMGN LKQGIANKDTVKASENYHDADADKQTAYTNAVSQAEGIINQTTNPTLNPDEITRALTQVTDAKNGLNGEAKLATEKQNAK DAVNAMTHLNDAQKQALKGQIDQSPEIATVNQVKQTATSLDQAMNQLSQAINDKTQTLADGNYLNADPDKQNAYKQAVAK AEALLNKQSGTNEVQAQVESITNEVNAAKQALNGNDNLANAKQQVKQQLANLTHLNDAQKQSVESQITQALDHAMELLRN SIADNQATLASEDYHDATAQRQNDYNQAVTAAKNIINQTTSPTMIPDEVNRATTQVNNTKVALDGDENLVAAKQQANNRL NQLDHLNNAQKQQLQSQITQSSDIATVNGHKQTAESLNTAMGNLINAIADHQAVEQRGNFINADTDKQTAYTTAVNEAEA LINKQTGQNANQSEVEQAITKVQTTLQALNGDHNLQVAKTNATQAIDALTSLNDPQKTALKDQVTAATLVTAVHQIEQNA NTLNLAMHGLRESIQDNAATKANSKYINEDQPEQQNYDQAVQAANNIINE >Mature_609_residues TPDTVTQAVTTMNQAKDALNGDEKLAQAKQDALANLDTLRDLNQPQRDALRNQINQAQALATVEQTKQNAQNVNTAMGNL KQGIANKDTVKASENYHDADADKQTAYTNAVSQAEGIINQTTNPTLNPDEITRALTQVTDAKNGLNGEAKLATEKQNAKD AVNAMTHLNDAQKQALKGQIDQSPEIATVNQVKQTATSLDQAMNQLSQAINDKTQTLADGNYLNADPDKQNAYKQAVAKA EALLNKQSGTNEVQAQVESITNEVNAAKQALNGNDNLANAKQQVKQQLANLTHLNDAQKQSVESQITQALDHAMELLRNS IADNQATLASEDYHDATAQRQNDYNQAVTAAKNIINQTTSPTMIPDEVNRATTQVNNTKVALDGDENLVAAKQQANNRLN QLDHLNNAQKQQLQSQITQSSDIATVNGHKQTAESLNTAMGNLINAIADHQAVEQRGNFINADTDKQTAYTTAVNEAEAL INKQTGQNANQSEVEQAITKVQTTLQALNGDHNLQVAKTNATQAIDALTSLNDPQKTALKDQVTAATLVTAVHQIEQNAN TLNLAMHGLRESIQDNAATKANSKYINEDQPEQQNYDQAVQAANNIINE
Specific function: Promotes bacterial attachment to both soluble and immobilized forms of fibronectin (Fn), in a dose-dependent and saturable manner [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 49 FIVAR domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011439 - InterPro: IPR011490 - InterPro: IPR020840 - InterPro: IPR002988 - InterPro: IPR005877 - InterPro: IPR009063 [H]
Pfam domain/function: PF07564 DUF1542; PF07554 FIVAR; PF01468 GA; PF04650 YSIRK_signal [H]
EC number: NA
Molecular weight: Translated: 65989; Mature: 65858
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPDTVTQAVTTMNQAKDALNGDEKLAQAKQDALANLDTLRDLNQPQRDALRNQINQAQA CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH LATVEQTKQNAQNVNTAMGNLKQGIANKDTVKASENYHDADADKQTAYTNAVSQAEGIIN HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH QTTNPTLNPDEITRALTQVTDAKNGLNGEAKLATEKQNAKDAVNAMTHLNDAQKQALKGQ CCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC IDQSPEIATVNQVKQTATSLDQAMNQLSQAINDKTQTLADGNYLNADPDKQNAYKQAVAK CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH AEALLNKQSGTNEVQAQVESITNEVNAAKQALNGNDNLANAKQQVKQQLANLTHLNDAQK HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHH QSVESQITQALDHAMELLRNSIADNQATLASEDYHDATAQRQNDYNQAVTAAKNIINQTT HHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC SPTMIPDEVNRATTQVNNTKVALDGDENLVAAKQQANNRLNQLDHLNNAQKQQLQSQITQ CCCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHC SSDIATVNGHKQTAESLNTAMGNLINAIADHQAVEQRGNFINADTDKQTAYTTAVNEAEA CCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHH LINKQTGQNANQSEVEQAITKVQTTLQALNGDHNLQVAKTNATQAIDALTSLNDPQKTAL HHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHCCCHHHHHH KDQVTAATLVTAVHQIEQNANTLNLAMHGLRESIQDNAATKANSKYINEDQPEQQNYDQA HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH VQAANNIINE HHHHHHHCCC >Mature Secondary Structure TPDTVTQAVTTMNQAKDALNGDEKLAQAKQDALANLDTLRDLNQPQRDALRNQINQAQA CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH LATVEQTKQNAQNVNTAMGNLKQGIANKDTVKASENYHDADADKQTAYTNAVSQAEGIIN HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH QTTNPTLNPDEITRALTQVTDAKNGLNGEAKLATEKQNAKDAVNAMTHLNDAQKQALKGQ CCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC IDQSPEIATVNQVKQTATSLDQAMNQLSQAINDKTQTLADGNYLNADPDKQNAYKQAVAK CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH AEALLNKQSGTNEVQAQVESITNEVNAAKQALNGNDNLANAKQQVKQQLANLTHLNDAQK HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHH QSVESQITQALDHAMELLRNSIADNQATLASEDYHDATAQRQNDYNQAVTAAKNIINQTT HHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC SPTMIPDEVNRATTQVNNTKVALDGDENLVAAKQQANNRLNQLDHLNNAQKQQLQSQITQ CCCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHC SSDIATVNGHKQTAESLNTAMGNLINAIADHQAVEQRGNFINADTDKQTAYTTAVNEAEA CCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHH LINKQTGQNANQSEVEQAITKVQTTLQALNGDHNLQVAKTNATQAIDALTSLNDPQKTAL HHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHCCCHHHHHH KDQVTAATLVTAVHQIEQNANTLNLAMHGLRESIQDNAATKANSKYINEDQPEQQNYDQA HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH VQAANNIINE HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA