Definition | Staphylococcus aureus RF122, complete genome. |
---|---|
Accession | NC_007622 |
Length | 2,742,531 |
Click here to switch to the map view.
The map label for this gene is gph [C]
Identifier: 82750263
GI number: 82750263
Start: 569118
End: 569801
Strand: Direct
Name: gph [C]
Synonym: SAB0506
Alternate gene names: 82750263
Gene position: 569118-569801 (Clockwise)
Preceding gene: 82750262
Following gene: 82750266
Centisome position: 20.75
GC content: 34.06
Gene sequence:
>684_bases ATGGAATGGATATTATTTGATAAAGATGGTACGTTAATTGAATTTGATAGAAGTTGGGAAAAAATAGGGGTAAGATTAGT ACAATCATTGCTTGAGACTTTCCCAGTACATAATAAAGAAGCTGCTTTAAGACAACTCGGTGTCATTAAAGAATCTATTG ATCCAAAATCAGTGATGGGTTCAGGATCTTTACAACAAATTATTCAGGCATTTAATGATGTGACTGGACAAGATACAACC GACTGGTCCAAGTCAACAAGTCAAAAGTTGGTAGATGAACGTATTCCTGAAATTAATTGGGTAGAAGGTGTTAAAGAAGC ACTTATCGATTTGAAAGCAAAAGGCTATCAACTAGGTATTGTTACGAGTGATACTAAAAAAGGTGTAGAACAATTTTTAG CACATACCAATGCTACCTCATTGTTCGATTTGATCATTTCTACCGAAGCGGATGCCTATGAGAAGCCAAATCCTAAAGTA TTATCGCCTTTATTTGAGCAATATAATGTAGATCCTCAGAAAGTAGCTATAGTAGGAGACACTGCTAATGATATGAAGAC AGCAAGTAATGCAAATTTAGGTATGGCAATAGGTGTATTAACAGGTATTGCAACAAAAGAAGAATTACATGAAGCTGATA TTATTTTAAATAGTGCGGCAGATATTATAGAAGCTTTAAATTAA
Upstream 100 bases:
>100_bases ATATTTAAAAAGAACAATACTACTAGTTCATTTTCAGGGAAATAACGAACATCATAGAATCAGCATAATACGAAATAAAT AAATAGGAGTATTGATATTA
Downstream 100 bases:
>100_bases AAAGAAAGACATAGTGTATATGTGAATTAATGTATTCGATAGAATTGATAAAATAATCGATGATTTCTATGGAAGTTACA TTGAATTAAAGCACATACAC
Product: hypothetical protein
Products: glycolate; phosphate
Alternate protein names: Phosphoglycolate Phosphatase; Phosphatase; Haloacid Dehalogenase-Like Hydrolase; Hydrolase; HAD Superfamily Hydrolase; Haloacid Dehalogenase/Epoxide Hydrolase Family Protein; Phosphoglycolate Phosphatase Protein; Phosphoglycolate Phosphatase Bacterial; Hydrolase Haloacid Dehalogenase-Like Family; HAD-Superfamily Hydrolase; Haloacid Dehalogenase Domain Protein Hydrolase; Pyrophosphatase PpaX; IndB Protein; HAD Superfamily Phosphatase
Number of amino acids: Translated: 227; Mature: 227
Protein sequence:
>227_residues MEWILFDKDGTLIEFDRSWEKIGVRLVQSLLETFPVHNKEAALRQLGVIKESIDPKSVMGSGSLQQIIQAFNDVTGQDTT DWSKSTSQKLVDERIPEINWVEGVKEALIDLKAKGYQLGIVTSDTKKGVEQFLAHTNATSLFDLIISTEADAYEKPNPKV LSPLFEQYNVDPQKVAIVGDTANDMKTASNANLGMAIGVLTGIATKEELHEADIILNSAADIIEALN
Sequences:
>Translated_227_residues MEWILFDKDGTLIEFDRSWEKIGVRLVQSLLETFPVHNKEAALRQLGVIKESIDPKSVMGSGSLQQIIQAFNDVTGQDTT DWSKSTSQKLVDERIPEINWVEGVKEALIDLKAKGYQLGIVTSDTKKGVEQFLAHTNATSLFDLIISTEADAYEKPNPKV LSPLFEQYNVDPQKVAIVGDTANDMKTASNANLGMAIGVLTGIATKEELHEADIILNSAADIIEALN >Mature_227_residues MEWILFDKDGTLIEFDRSWEKIGVRLVQSLLETFPVHNKEAALRQLGVIKESIDPKSVMGSGSLQQIIQAFNDVTGQDTT DWSKSTSQKLVDERIPEINWVEGVKEALIDLKAKGYQLGIVTSDTKKGVEQFLAHTNATSLFDLIISTEADAYEKPNPKV LSPLFEQYNVDPQKVAIVGDTANDMKTASNANLGMAIGVLTGIATKEELHEADIILNSAADIIEALN
Specific function: Unknown
COG id: COG0546
COG function: function code R; Predicted phosphatases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Caenorhabditis elegans, GI17567717, Length=117, Percent_Identity=34.1880341880342, Blast_Score=76, Evalue=1e-14, Organism=Caenorhabditis elegans, GI71983424, Length=218, Percent_Identity=23.8532110091743, Blast_Score=66, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.1.3.18
Molecular weight: Translated: 24959; Mature: 24959
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEWILFDKDGTLIEFDRSWEKIGVRLVQSLLETFPVHNKEAALRQLGVIKESIDPKSVMG CCEEEECCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHC SGSLQQIIQAFNDVTGQDTTDWSKSTSQKLVDERIPEINWVEGVKEALIDLKAKGYQLGI CCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEE VTSDTKKGVEQFLAHTNATSLFDLIISTEADAYEKPNPKVLSPLFEQYNVDPQKVAIVGD EECHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHEEEECC TANDMKTASNANLGMAIGVLTGIATKEELHEADIILNSAADIIEALN CCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MEWILFDKDGTLIEFDRSWEKIGVRLVQSLLETFPVHNKEAALRQLGVIKESIDPKSVMG CCEEEECCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHC SGSLQQIIQAFNDVTGQDTTDWSKSTSQKLVDERIPEINWVEGVKEALIDLKAKGYQLGI CCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEE VTSDTKKGVEQFLAHTNATSLFDLIISTEADAYEKPNPKVLSPLFEQYNVDPQKVAIVGD EECHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHEEEECC TANDMKTASNANLGMAIGVLTGIATKEELHEADIILNSAADIIEALN CCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Mg2+ [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): 0.57 {phosphoglycolate}} [C]
Substrates: 2-phosphoglycolate; H2O
Specific reaction: 2-phosphoglycolate + H2O = glycolate + phosphate
General reaction: Additional information:
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA