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The map label for this gene is pbpG [H]

Identifier: 82703413

GI number: 82703413

Start: 2610416

End: 2611252

Strand: Reverse

Name: pbpG [H]

Synonym: Nmul_A2296

Alternate gene names: 82703413

Gene position: 2611252-2610416 (Counterclockwise)

Preceding gene: 82703414

Following gene: 82703412

Centisome position: 82.01

GC content: 54.84

Gene sequence:

>837_bases
ATGAAGAACGCCATATTGGTAGTTTGTGCCACGCTTGCGTTTATGGGAGGCGCTTTTGCAAAACCGGCCGACTTGTCTCT
CCGGTCCAACTCGGCGCTGGTTGTGGATCCACAGCGGGGACAGGTTCTTTTCCACAAGAACGCAGACAGTGTCATGCCGA
TTGCTTCGATTACCAAACTCATGACCGCAATGGTTGTGCTCGATGCAAAACTGCCGCTGAACCAGGAAATAGTCATCGAC
TCGGCTGATGTCGATGTCATCAAGTATACCCGTTCCCGCCTGAGGGTAGGAACGAAGTTCACCCGCGGAGAATTGTTGCG
GCTGGCCTTGATGTCTTCGGAGAATCGCGCTGCTGCAGCGCTGGGACGTACCTATCCCGGCGGCCTGAATGCGTTTGTTG
CAGCCATGAACCGCAAGGCATTCCAGTTGGGAATGGGCAGCACCTATTTCGTTGACTCGACCGGCTTGAACAGCGGTAAT
GTCTCCACCGCCCGCGATCTGGCAAAGATGGTCAAGGCGGCACACGGGTACCGCCTCATCCGCGTATTTTCCACGACCGC
TGCCCACGAGGTGGCATCCATGGGGAAGGTACGCAGCCGCAACCTGAATTACGTCAATTCCAACAGGTTGGTAAGGAGCA
GCAGTTGGGATATCGGGATATCCAAAACAGGGTTTCTCAGCGAGGCGGGGCGCTGTCTGGTGATGCATGCAAATATCACA
GGCAAGCCGACCATAATCGTGCTGCTCGATTCCTGGGGAAAGAATTCCCGGATTGGCGATGCCAATCGTATCAAGAAATG
GCTGGAAACCGGGTTCACCCGTAAAATACGCGGTTAG

Upstream 100 bases:

>100_bases
CCCTGAACATAGCTCTTTCCCTAGCTCGTGATATTTGGTACTTTATCGGCGGTAGGCCCAGTCCGCAGGGAGGGCGGACA
ACTCCATTGGATAATGACAA

Downstream 100 bases:

>100_bases
CGAGTGAAGTGGCCTGCTTGCCGTGAGGATAGCGCCACTTTTGTTCAATCATCCTTTTGCTGATTCAAGTGTACGGAATC
GCGTTCGGACCAGTCTTCGG

Product: peptidase S11, D-alanyl-D-alanine carboxypeptidase 1

Products: NA

Alternate protein names: DD-endopeptidase; Penicillin-binding protein 5; PBP-5 [H]

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MKNAILVVCATLAFMGGAFAKPADLSLRSNSALVVDPQRGQVLFHKNADSVMPIASITKLMTAMVVLDAKLPLNQEIVID
SADVDVIKYTRSRLRVGTKFTRGELLRLALMSSENRAAAALGRTYPGGLNAFVAAMNRKAFQLGMGSTYFVDSTGLNSGN
VSTARDLAKMVKAAHGYRLIRVFSTTAAHEVASMGKVRSRNLNYVNSNRLVRSSSWDIGISKTGFLSEAGRCLVMHANIT
GKPTIIVLLDSWGKNSRIGDANRIKKWLETGFTRKIRG

Sequences:

>Translated_278_residues
MKNAILVVCATLAFMGGAFAKPADLSLRSNSALVVDPQRGQVLFHKNADSVMPIASITKLMTAMVVLDAKLPLNQEIVID
SADVDVIKYTRSRLRVGTKFTRGELLRLALMSSENRAAAALGRTYPGGLNAFVAAMNRKAFQLGMGSTYFVDSTGLNSGN
VSTARDLAKMVKAAHGYRLIRVFSTTAAHEVASMGKVRSRNLNYVNSNRLVRSSSWDIGISKTGFLSEAGRCLVMHANIT
GKPTIIVLLDSWGKNSRIGDANRIKKWLETGFTRKIRG
>Mature_278_residues
MKNAILVVCATLAFMGGAFAKPADLSLRSNSALVVDPQRGQVLFHKNADSVMPIASITKLMTAMVVLDAKLPLNQEIVID
SADVDVIKYTRSRLRVGTKFTRGELLRLALMSSENRAAAALGRTYPGGLNAFVAAMNRKAFQLGMGSTYFVDSTGLNSGN
VSTARDLAKMVKAAHGYRLIRVFSTTAAHEVASMGKVRSRNLNYVNSNRLVRSSSWDIGISKTGFLSEAGRCLVMHANIT
GKPTIIVLLDSWGKNSRIGDANRIKKWLETGFTRKIRG

Specific function: Cell wall formation [H]

COG id: COG1686

COG function: function code M; D-alanyl-D-alanine carboxypeptidase

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S11 family [H]

Homologues:

Organism=Escherichia coli, GI87082054, Length=243, Percent_Identity=47.3251028806584, Blast_Score=223, Evalue=9e-60,
Organism=Escherichia coli, GI1787062, Length=255, Percent_Identity=28.6274509803922, Blast_Score=64, Evalue=8e-12,
Organism=Escherichia coli, GI87082022, Length=290, Percent_Identity=25.5172413793103, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR018044
- InterPro:   IPR001967 [H]

Pfam domain/function: PF00768 Peptidase_S11 [H]

EC number: 3.4.99.- [C]

Molecular weight: Translated: 30168; Mature: 30168

Theoretical pI: Translated: 11.21; Mature: 11.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNAILVVCATLAFMGGAFAKPADLSLRSNSALVVDPQRGQVLFHKNADSVMPIASITKL
CCCHHHHHHHHHHHHCCCCCCCCCCEECCCCEEEEECCCCEEEEECCCCCCCHHHHHHHH
MTAMVVLDAKLPLNQEIVIDSADVDVIKYTRSRLRVGTKFTRGELLRLALMSSENRAAAA
HHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHEEEECCCCCCHHHH
LGRTYPGGLNAFVAAMNRKAFQLGMGSTYFVDSTGLNSGNVSTARDLAKMVKAAHGYRLI
HCCCCCCCHHHHHHHHCCCEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEE
RVFSTTAAHEVASMGKVRSRNLNYVNSNRLVRSSSWDIGISKTGFLSEAGRCLVMHANIT
EEEHHHHHHHHHHHHHHHCCCCCEECCCCEEECCCCCCCCCCCCCHHCCCCEEEEEECCC
GKPTIIVLLDSWGKNSRIGDANRIKKWLETGFTRKIRG
CCCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKNAILVVCATLAFMGGAFAKPADLSLRSNSALVVDPQRGQVLFHKNADSVMPIASITKL
CCCHHHHHHHHHHHHCCCCCCCCCCEECCCCEEEEECCCCEEEEECCCCCCCHHHHHHHH
MTAMVVLDAKLPLNQEIVIDSADVDVIKYTRSRLRVGTKFTRGELLRLALMSSENRAAAA
HHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHEEEECCCCCCHHHH
LGRTYPGGLNAFVAAMNRKAFQLGMGSTYFVDSTGLNSGNVSTARDLAKMVKAAHGYRLI
HCCCCCCCHHHHHHHHCCCEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEE
RVFSTTAAHEVASMGKVRSRNLNYVNSNRLVRSSSWDIGISKTGFLSEAGRCLVMHANIT
EEEHHHHHHHHHHHHHHHCCCCCEECCCCEEECCCCCCCCCCCCCHHCCCCEEEEEECCC
GKPTIIVLLDSWGKNSRIGDANRIKKWLETGFTRKIRG
CCCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]