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The map label for this gene is yajR [H]

Identifier: 82703346

GI number: 82703346

Start: 2528869

End: 2530254

Strand: Reverse

Name: yajR [H]

Synonym: Nmul_A2228

Alternate gene names: 82703346

Gene position: 2530254-2528869 (Counterclockwise)

Preceding gene: 82703352

Following gene: 82703345

Centisome position: 79.46

GC content: 57.29

Gene sequence:

>1386_bases
ATGTCCCCCTCATCGTCTTCCGAGAAACTGTCACCCCCAGAGATACGCGCGATCGCGGGCCTGGCGAGTATTTACGGCCT
CCGCATGCTGGGAATGTTCATCATTCTCCCGGTATTCGCGTTTTACGCCGAACATCTGCCGGGAGGCGACAATTACACGC
TGGTCGGGATTGCACTGGGCGCGTACGGGTTGACGCAGGCGATATTGCAGGTTCCGTTCGGCTGGCTGTCTGATCGCTTC
GGCCGCAAACCGGTGATTTATGGCGGCCTGCTCCTGTTCGCCCTGGGCAGTTTTGTCGCAGCCGCAGCAACGGATATTTA
CTGGGTAATCGCTGGCCGTGTCATCCAGGGAGCAGGGGCGATTTCGGCGGCTGTGATGGCGCTTGCCGCGGATCTCACAC
GCGAAGAACACCGCACCAAGGCAATGGCGGCGATCGGCATGACGATAGGAACTACCTTCGCGCTGTCTCTGGTCATTGCG
CCGTCGCTCAACCGCATGATTGGCGTGCCCGGAATTTTCTTCATGACAGGGGTGCTGGTGCTGCTGGCGATGATCGTAGT
TTCGCGGGTGGTTCCCAACCCGACAGACAGGCGGTTCCATTCGGATACGGAAGCGTCCGCAGGGGGAATTTTTAATGTCC
TCCGAAATCCGGAACTGTTGCGCCTCGATTTTGGTGTCTTCGCATTGCACGCCGTACTGATGGCCCTATGGCTGGTGGTA
CCGCTATCGCTGCGGCAGGCAGGGCTGGCAGCGGATCATCACTGGCAAATCTATTTTCCCGCGCTGGTCATTTCCATGCT
GCTGATCATTCCAGTGATCATCTATAGCGAAAAGAAGGCAAAGCTAAAGCAAGTGTTTGTCATATCCGTCGCTGTGCTGC
TGGTAAGCCAGATCCTGCTGGCCTATACATTCGATTCGATATGGGGCACTGCGGGTGCGCTGCTGGTATTCTTCACCGCC
TTCAATCTGCTGGAAGCGACGCTGCCTTCGCTCATTTCCAAGATCGCTCCCGTAGGGGCAAAAGGCACCGCCATCGGGGT
CTATAGCAGTGTCCAGTTCCTGGGTACGTTTATTGGTGCCAGCGCCGGGGGCTATCTCTATCAGCATTACGGAAGTACCG
CACTGTTTGCATTCTGCGGGGCGCTTCTCATGTTGTGGCTGATATTTGCCGTTACCATGAAGGCGCCCGCAGCTGTTCGT
ACCAGGATGTACCACGTGCAGGTAATGGATACCGGCACCGCCCACGGGCTTTCGCGGCAACTGGCGGCGCTGCCCGGTGT
GCATGAGGCGCTGGTGCTTGCGAGCGAAGGGGTGGCTTACCTGAAAGTAGATATGCGTGGTTTTGATGAGCAGGGCGTTG
CTCAATTACTTGGAGGGGAAGCATAA

Upstream 100 bases:

>100_bases
CTGACGGTCCGGCGCCTGCTCGTCCACCGAGGCAAGGCTACCTGAGAACCGGCCAAACCTGTTAATATACTCAAGTTTCC
GCGTTTTCCCAATCTGATTC

Downstream 100 bases:

>100_bases
ATGGCATCAGTCAACAAAGTCATACTCATCGGCAACCTCGGCAAGGATCCCGAGACGCGCTATATGCCGAACGGTGACGC
GGTGACGAACATCACCGTGG

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 461; Mature: 460

Protein sequence:

>461_residues
MSPSSSSEKLSPPEIRAIAGLASIYGLRMLGMFIILPVFAFYAEHLPGGDNYTLVGIALGAYGLTQAILQVPFGWLSDRF
GRKPVIYGGLLLFALGSFVAAAATDIYWVIAGRVIQGAGAISAAVMALAADLTREEHRTKAMAAIGMTIGTTFALSLVIA
PSLNRMIGVPGIFFMTGVLVLLAMIVVSRVVPNPTDRRFHSDTEASAGGIFNVLRNPELLRLDFGVFALHAVLMALWLVV
PLSLRQAGLAADHHWQIYFPALVISMLLIIPVIIYSEKKAKLKQVFVISVAVLLVSQILLAYTFDSIWGTAGALLVFFTA
FNLLEATLPSLISKIAPVGAKGTAIGVYSSVQFLGTFIGASAGGYLYQHYGSTALFAFCGALLMLWLIFAVTMKAPAAVR
TRMYHVQVMDTGTAHGLSRQLAALPGVHEALVLASEGVAYLKVDMRGFDEQGVAQLLGGEA

Sequences:

>Translated_461_residues
MSPSSSSEKLSPPEIRAIAGLASIYGLRMLGMFIILPVFAFYAEHLPGGDNYTLVGIALGAYGLTQAILQVPFGWLSDRF
GRKPVIYGGLLLFALGSFVAAAATDIYWVIAGRVIQGAGAISAAVMALAADLTREEHRTKAMAAIGMTIGTTFALSLVIA
PSLNRMIGVPGIFFMTGVLVLLAMIVVSRVVPNPTDRRFHSDTEASAGGIFNVLRNPELLRLDFGVFALHAVLMALWLVV
PLSLRQAGLAADHHWQIYFPALVISMLLIIPVIIYSEKKAKLKQVFVISVAVLLVSQILLAYTFDSIWGTAGALLVFFTA
FNLLEATLPSLISKIAPVGAKGTAIGVYSSVQFLGTFIGASAGGYLYQHYGSTALFAFCGALLMLWLIFAVTMKAPAAVR
TRMYHVQVMDTGTAHGLSRQLAALPGVHEALVLASEGVAYLKVDMRGFDEQGVAQLLGGEA
>Mature_460_residues
SPSSSSEKLSPPEIRAIAGLASIYGLRMLGMFIILPVFAFYAEHLPGGDNYTLVGIALGAYGLTQAILQVPFGWLSDRFG
RKPVIYGGLLLFALGSFVAAAATDIYWVIAGRVIQGAGAISAAVMALAADLTREEHRTKAMAAIGMTIGTTFALSLVIAP
SLNRMIGVPGIFFMTGVLVLLAMIVVSRVVPNPTDRRFHSDTEASAGGIFNVLRNPELLRLDFGVFALHAVLMALWLVVP
LSLRQAGLAADHHWQIYFPALVISMLLIIPVIIYSEKKAKLKQVFVISVAVLLVSQILLAYTFDSIWGTAGALLVFFTAF
NLLEATLPSLISKIAPVGAKGTAIGVYSSVQFLGTFIGASAGGYLYQHYGSTALFAFCGALLMLWLIFAVTMKAPAAVRT
RMYHVQVMDTGTAHGLSRQLAALPGVHEALVLASEGVAYLKVDMRGFDEQGVAQLLGGEA

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI87081738, Length=451, Percent_Identity=42.350332594235, Blast_Score=353, Evalue=1e-98,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 49126; Mature: 48995

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPSSSSEKLSPPEIRAIAGLASIYGLRMLGMFIILPVFAFYAEHLPGGDNYTLVGIALG
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHH
AYGLTQAILQVPFGWLSDRFGRKPVIYGGLLLFALGSFVAAAATDIYWVIAGRVIQGAGA
HHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
ISAAVMALAADLTREEHRTKAMAAIGMTIGTTFALSLVIAPSLNRMIGVPGIFFMTGVLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCHHHHHHHHHH
LLAMIVVSRVVPNPTDRRFHSDTEASAGGIFNVLRNPELLRLDFGVFALHAVLMALWLVV
HHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHH
PLSLRQAGLAADHHWQIYFPALVISMLLIIPVIIYSEKKAKLKQVFVISVAVLLVSQILL
HHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
AYTFDSIWGTAGALLVFFTAFNLLEATLPSLISKIAPVGAKGTAIGVYSSVQFLGTFIGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHC
SAGGYLYQHYGSTALFAFCGALLMLWLIFAVTMKAPAAVRTRMYHVQVMDTGTAHGLSRQ
CCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHEEEEEEEECCCHHHHHHH
LAALPGVHEALVLASEGVAYLKVDMRGFDEQGVAQLLGGEA
HHHCCCHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHCCCC
>Mature Secondary Structure 
SPSSSSEKLSPPEIRAIAGLASIYGLRMLGMFIILPVFAFYAEHLPGGDNYTLVGIALG
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHH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HHHCCCHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]