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The map label for this gene is yccA [C]

Identifier: 82703333

GI number: 82703333

Start: 2514979

End: 2515674

Strand: Direct

Name: yccA [C]

Synonym: Nmul_A2215

Alternate gene names: 82703333

Gene position: 2514979-2515674 (Clockwise)

Preceding gene: 82703329

Following gene: 82703347

Centisome position: 78.98

GC content: 56.18

Gene sequence:

>696_bases
ATGCAACCTGAACTTCGATATTCCAGCCCGACTGTGCAAACCGGACTTGCAGTCGAGCGCAACAAGGTACTGCGCAATAC
CTATTGGATGCTTGGCCTGACCATGATCCCAACGGTGATCGGCGCGATGATCGGAATGAGCACCAACTTTGCGTTCCTCG
CGCAAGCGCCTATCATGGGACCGCTGGTGATGCTGGCCATCATGATGGGATTGCTGTTTGGCGTAAGCGCCACCCGCAAC
AGCGTGGTGGGAATCGGATTGCTGTTCCTGTTTACTTTTGTGGCCGGGTGGTGGCTGGGCCCGATGCTCCAGTATGCGCT
TCATTTCAAGAATGGCGCACAGATCATCACAACCGCCGCCGCGGGAACAGGAGCAATCTTCTTCACGCTGGCCACCATCG
CCACGGTGACGAAGAAGGATTTCGGCTTTATGCAGAACTTCCTGTTCGTGGGGCTGATACTCCTGATGATCGCGTCGATC
GCCAATCTGTTCTTTGCCGTACCGGCAGCCTCGCTCGCCATTTCGGCAGTTGCGGTACTGCTGTTCTCCGGTTTCATTCT
GTTTGATGTAAGCCGTATCGTGAACGGCGGGGAAACCAACTACGTGATGGCGACCATGGGCATCTACCTCAGCCTGTACA
ACCTCTTCACCAGCCTGCTGCACCTGCTGCTGGCGTTGTCGGGCGAGAGAGACTGA

Upstream 100 bases:

>100_bases
TGTTTTTCCAGCAATGCGCCTGCAATAACGACAGGATTGCAACTTTCCATAAAGATGAGTAGTCTTATGCGTGTAAAGTT
TCGTCAACCAAGGAGACGTC

Downstream 100 bases:

>100_bases
CGCGAAAAGCGCCATAGGAAAAACTATAGGATAAGCCCCAGGAGCAAGCCAGGGGAATCCGGAAATACCTCCGGGGCGGC
TGGAAACAGCCGCCTTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MQPELRYSSPTVQTGLAVERNKVLRNTYWMLGLTMIPTVIGAMIGMSTNFAFLAQAPIMGPLVMLAIMMGLLFGVSATRN
SVVGIGLLFLFTFVAGWWLGPMLQYALHFKNGAQIITTAAAGTGAIFFTLATIATVTKKDFGFMQNFLFVGLILLMIASI
ANLFFAVPAASLAISAVAVLLFSGFILFDVSRIVNGGETNYVMATMGIYLSLYNLFTSLLHLLLALSGERD

Sequences:

>Translated_231_residues
MQPELRYSSPTVQTGLAVERNKVLRNTYWMLGLTMIPTVIGAMIGMSTNFAFLAQAPIMGPLVMLAIMMGLLFGVSATRN
SVVGIGLLFLFTFVAGWWLGPMLQYALHFKNGAQIITTAAAGTGAIFFTLATIATVTKKDFGFMQNFLFVGLILLMIASI
ANLFFAVPAASLAISAVAVLLFSGFILFDVSRIVNGGETNYVMATMGIYLSLYNLFTSLLHLLLALSGERD
>Mature_231_residues
MQPELRYSSPTVQTGLAVERNKVLRNTYWMLGLTMIPTVIGAMIGMSTNFAFLAQAPIMGPLVMLAIMMGLLFGVSATRN
SVVGIGLLFLFTFVAGWWLGPMLQYALHFKNGAQIITTAAAGTGAIFFTLATIATVTKKDFGFMQNFLFVGLILLMIASI
ANLFFAVPAASLAISAVAVLLFSGFILFDVSRIVNGGETNYVMATMGIYLSLYNLFTSLLHLLLALSGERD

Specific function: Unknown

COG id: COG0670

COG function: function code R; Integral membrane protein, interacts with FtsH

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BI1 family [H]

Homologues:

Organism=Escherichia coli, GI1787205, Length=216, Percent_Identity=40.2777777777778, Blast_Score=131, Evalue=4e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006214 [H]

Pfam domain/function: PF01027 UPF0005 [H]

EC number: NA

Molecular weight: Translated: 24932; Mature: 24932

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPELRYSSPTVQTGLAVERNKVLRNTYWMLGLTMIPTVIGAMIGMSTNFAFLAQAPIMG
CCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHH
PLVMLAIMMGLLFGVSATRNSVVGIGLLFLFTFVAGWWLGPMLQYALHFKNGAQIITTAA
HHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC
AGTGAIFFTLATIATVTKKDFGFMQNFLFVGLILLMIASIANLFFAVPAASLAISAVAVL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFSGFILFDVSRIVNGGETNYVMATMGIYLSLYNLFTSLLHLLLALSGERD
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MQPELRYSSPTVQTGLAVERNKVLRNTYWMLGLTMIPTVIGAMIGMSTNFAFLAQAPIMG
CCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHH
PLVMLAIMMGLLFGVSATRNSVVGIGLLFLFTFVAGWWLGPMLQYALHFKNGAQIITTAA
HHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC
AGTGAIFFTLATIATVTKKDFGFMQNFLFVGLILLMIASIANLFFAVPAASLAISAVAVL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFSGFILFDVSRIVNGGETNYVMATMGIYLSLYNLFTSLLHLLLALSGERD
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]