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The map label for this gene is rhsB [H]

Identifier: 82703331

GI number: 82703331

Start: 2513497

End: 2514120

Strand: Reverse

Name: rhsB [H]

Synonym: Nmul_A2213

Alternate gene names: 82703331

Gene position: 2514120-2513497 (Counterclockwise)

Preceding gene: 82703332

Following gene: 82703330

Centisome position: 78.96

GC content: 55.77

Gene sequence:

>624_bases
GTGGGTGTGGGATATGGACCCTTCGGCGCCAATCCACCGAACCAGAACCCCTCAGGACTGGGAACGTTCAGCTACAATCT
GAGATACCCGGGTCAGTATCATGATGCCGAAACAGGCCTGCACTACAACTACTTCCGGGATTACGATCCTAAGACAGGGC
GCTATATCCAGAGTGATCCGATTGGGTTGGCAGGAGGAATTAATACCTACGTATATGTTGAAGGAAATCCCCTTTCCAAG
ATCGATCCTACAGGGGAAATTGCATTTGTTCCGATCCTGATCGGCATCGGGGTTGGCTACGCGTTCGACTATGCACTTGA
GCGCTACAAGAAGGAGCATTGCACGTGCCAAACCACGCCGGTCGGTGCCGCCGGCAATGCAGCAGCCGGCGGTGCAGTTG
GTGGGGCTGGTAGGTTTGCGAGCAAACCGCGAGGAGGTATTGCTGGTGGAGGCCTTGCGGGTACGGGGACCTCAAGTTTT
AGCCAGATGAATCATATGGCGGCAAAGAGCGGCATGTACTCGGTTGCGACGCGGAACGGGATCACCGAGGTTCTGCGGAA
GGTCCCGTATGCCGGTGCTGCCTTGGCGGCCTATGAAGTCTATGACGCTCTCTCTTGCGATTGA

Upstream 100 bases:

>100_bases
CGACCTTCCCCTGGCTATCCTCAGATACGGCACCATCTACTACATCCATACCGATCACCTCAATACCTCGGCAGATTCAT
GATGCGATAGGCCAGGCAGT

Downstream 100 bases:

>100_bases
TGTCTATGGCAAATGAACTCTCGATCGAATTGCGCGAATACCTTAAGCGCTGCGGCCTGTCTGAACGCATGATCGCCCGG
TGTAATGGCAACACGCGGAT

Product: RhsD protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 206

Protein sequence:

>207_residues
MGVGYGPFGANPPNQNPSGLGTFSYNLRYPGQYHDAETGLHYNYFRDYDPKTGRYIQSDPIGLAGGINTYVYVEGNPLSK
IDPTGEIAFVPILIGIGVGYAFDYALERYKKEHCTCQTTPVGAAGNAAAGGAVGGAGRFASKPRGGIAGGGLAGTGTSSF
SQMNHMAAKSGMYSVATRNGITEVLRKVPYAGAALAAYEVYDALSCD

Sequences:

>Translated_207_residues
MGVGYGPFGANPPNQNPSGLGTFSYNLRYPGQYHDAETGLHYNYFRDYDPKTGRYIQSDPIGLAGGINTYVYVEGNPLSK
IDPTGEIAFVPILIGIGVGYAFDYALERYKKEHCTCQTTPVGAAGNAAAGGAVGGAGRFASKPRGGIAGGGLAGTGTSSF
SQMNHMAAKSGMYSVATRNGITEVLRKVPYAGAALAAYEVYDALSCD
>Mature_206_residues
GVGYGPFGANPPNQNPSGLGTFSYNLRYPGQYHDAETGLHYNYFRDYDPKTGRYIQSDPIGLAGGINTYVYVEGNPLSKI
DPTGEIAFVPILIGIGVGYAFDYALERYKKEHCTCQTTPVGAAGNAAAGGAVGGAGRFASKPRGGIAGGGLAGTGTSSFS
QMNHMAAKSGMYSVATRNGITEVLRKVPYAGAALAAYEVYDALSCD

Specific function: Rhs elements have a nonessential function. They may play an important role in the natural ecology of the cell [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RHS family [H]

Homologues:

Organism=Escherichia coli, GI48994942, Length=81, Percent_Identity=49.3827160493827, Blast_Score=73, Evalue=1e-14,
Organism=Escherichia coli, GI1786917, Length=81, Percent_Identity=49.3827160493827, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1786706, Length=58, Percent_Identity=60.3448275862069, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1790020, Length=81, Percent_Identity=46.9135802469136, Blast_Score=69, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001826
- InterPro:   IPR022385
- InterPro:   IPR006530 [H]

Pfam domain/function: PF03527 RHS; PF05593 RHS_repeat [H]

EC number: NA

Molecular weight: Translated: 21575; Mature: 21444

Theoretical pI: Translated: 7.48; Mature: 7.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVGYGPFGANPPNQNPSGLGTFSYNLRYPGQYHDAETGLHYNYFRDYDPKTGRYIQSDP
CCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEECHHCCCCCCCCCEECCCC
IGLAGGINTYVYVEGNPLSKIDPTGEIAFVPILIGIGVGYAFDYALERYKKEHCTCQTTP
CEEECCCCEEEEEECCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCEEECCC
VGAAGNAAAGGAVGGAGRFASKPRGGIAGGGLAGTGTSSFSQMNHMAAKSGMYSVATRNG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEHHHHCC
ITEVLRKVPYAGAALAAYEVYDALSCD
HHHHHHHCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GVGYGPFGANPPNQNPSGLGTFSYNLRYPGQYHDAETGLHYNYFRDYDPKTGRYIQSDP
CCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEECHHCCCCCCCCCEECCCC
IGLAGGINTYVYVEGNPLSKIDPTGEIAFVPILIGIGVGYAFDYALERYKKEHCTCQTTP
CEEECCCCEEEEEECCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCEEECCC
VGAAGNAAAGGAVGGAGRFASKPRGGIAGGGLAGTGTSSFSQMNHMAAKSGMYSVATRNG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEHHHHCC
ITEVLRKVPYAGAALAAYEVYDALSCD
HHHHHHHCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8387990; 8041620; 9278503; 2644231; 2403547; 7934896 [H]