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The map label for this gene is ygiT [H]

Identifier: 82703329

GI number: 82703329

Start: 2512467

End: 2512964

Strand: Direct

Name: ygiT [H]

Synonym: Nmul_A2211

Alternate gene names: 82703329

Gene position: 2512467-2512964 (Clockwise)

Preceding gene: 82703328

Following gene: 82703333

Centisome position: 78.9

GC content: 51.81

Gene sequence:

>498_bases
ATGGAGTGCGTCATATGTTGGAAGGGCGAACTTGTACGCGATACGCGTGATGTGTCTTTTACCTACAAGTGTCAAAAGAC
CTTCATTAAAGATATCGACGGCGAGTATTGCACACATTGCGGCATGGGCTATTACGGACCTGAACATGCCGGTGACGAAC
TGGTGGCAGGAATGGTTGAATTCAGGAAGCATGTGGACAGCGTGCTGCAAGAGCAGGGTCTATTCGTGGCCAAGACCAGA
CAAAAACTGGGGCTTGAACAGAACGAAGCGGATGGGATTTTCGGCGGCATTAACGCCTTTTCTCGTTACGAAAGCGGAAA
AGTAAGGACGCCAGTCGCGGTCATGCAGCTTTTGACGCTGCTCGACCGGCACCCGGAGCTGCTTGAGGAAATCAGACAGA
ACAGATATCGGATCGGGGGTGCACAGGAGTTTCGTGAGGAGTCGTTCGGGTCCATCGGCGCAGACCAGAATCAACTGAGA
TTGACCGTTAATCCATGA

Upstream 100 bases:

>100_bases
TTGAGGAAATCAGGCAGAATAGATATCGGACCAGGGGTACACAGGAGCTTCGTGAGGAAGTATCCGCGCAGAAGGAACTG
ACGGATTGAGCGAGAAAAAC

Downstream 100 bases:

>100_bases
AGTCGTCGATAGTGCCAGCCTTTGGATGTAGTTTTTTGAACCGACATCTCTGATGAAGACGCGGCCACTCTTGCCTTACT
GCCCCTTTCGTATAAGTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MECVICWKGELVRDTRDVSFTYKCQKTFIKDIDGEYCTHCGMGYYGPEHAGDELVAGMVEFRKHVDSVLQEQGLFVAKTR
QKLGLEQNEADGIFGGINAFSRYESGKVRTPVAVMQLLTLLDRHPELLEEIRQNRYRIGGAQEFREESFGSIGADQNQLR
LTVNP

Sequences:

>Translated_165_residues
MECVICWKGELVRDTRDVSFTYKCQKTFIKDIDGEYCTHCGMGYYGPEHAGDELVAGMVEFRKHVDSVLQEQGLFVAKTR
QKLGLEQNEADGIFGGINAFSRYESGKVRTPVAVMQLLTLLDRHPELLEEIRQNRYRIGGAQEFREESFGSIGADQNQLR
LTVNP
>Mature_165_residues
MECVICWKGELVRDTRDVSFTYKCQKTFIKDIDGEYCTHCGMGYYGPEHAGDELVAGMVEFRKHVDSVLQEQGLFVAKTR
QKLGLEQNEADGIFGGINAFSRYESGKVRTPVAVMQLLTLLDRHPELLEEIRQNRYRIGGAQEFREESFGSIGADQNQLR
LTVNP

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789398, Length=135, Percent_Identity=42.962962962963, Blast_Score=108, Evalue=1e-25,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982
- InterPro:   IPR022452
- InterPro:   IPR022453 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18740; Mature: 18740

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MECVICWKGELVRDTRDVSFTYKCQKTFIKDIDGEYCTHCGMGYYGPEHAGDELVAGMVE
CCEEEECCCCCCCCCCCCEEEHHHHHHHHHHCCCHHHHHCCCCCCCCCCCHHHHHHHHHH
FRKHVDSVLQEQGLFVAKTRQKLGLEQNEADGIFGGINAFSRYESGKVRTPVAVMQLLTL
HHHHHHHHHHHCCCEEEHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHH
LDRHPELLEEIRQNRYRIGGAQEFREESFGSIGADQNQLRLTVNP
HCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCEEEEECC
>Mature Secondary Structure
MECVICWKGELVRDTRDVSFTYKCQKTFIKDIDGEYCTHCGMGYYGPEHAGDELVAGMVE
CCEEEECCCCCCCCCCCCEEEHHHHHHHHHHCCCHHHHHCCCCCCCCCCCHHHHHHHHHH
FRKHVDSVLQEQGLFVAKTRQKLGLEQNEADGIFGGINAFSRYESGKVRTPVAVMQLLTL
HHHHHHHHHHHCCCEEEHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHH
LDRHPELLEEIRQNRYRIGGAQEFREESFGSIGADQNQLRLTVNP
HCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]