Click here to switch to the map view.

The map label for this gene is mqsR [H]

Identifier: 82703327

GI number: 82703327

Start: 2511678

End: 2511980

Strand: Direct

Name: mqsR [H]

Synonym: Nmul_A2209

Alternate gene names: 82703327

Gene position: 2511678-2511980 (Clockwise)

Preceding gene: 82703326

Following gene: 82703328

Centisome position: 78.88

GC content: 44.88

Gene sequence:

>303_bases
ATGGACAAGAGCAAACCACATTACGAACTGGACAAGGTCAAAAGCTTAATACGCGCTGGTCAGTATCGGATAACAAGAGT
CGCAAGCGAAGGCGGCGACAAGCTAGGTTTTAAAAACACCCAAGAGATCGCGGAATTCGTGCTAACGCTGAAACGCACCG
ATTTCTATAAAAGCATGACAAGCAACATGAACCACAAGGAATGGCAAGACGTGTATCACGGCGACGGGCCAACGAAAAAA
GTGGTTTACCTGAAATTCATTGTCACGAACGACGTATTGATACTTTCCTTTAAGGAGAAATGA

Upstream 100 bases:

>100_bases
TCAACGGATCGGTTTCGTACGCCGCTCTTACTCACACTCATTCTGGTTCAGGTCTATAAAAGAGTTGACAATATTAACCT
ATTAGGTTGACATACTGTTC

Downstream 100 bases:

>100_bases
GATGAGATGTTCACTGTGCGGGAAGGGCGAGGTGGTAGCGGGTACCCGCGATGTGCCCTTTACCTATAAGGGCCAAAAAA
CCTTTATTAAAAATATTCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 100; Mature: 100

Protein sequence:

>100_residues
MDKSKPHYELDKVKSLIRAGQYRITRVASEGGDKLGFKNTQEIAEFVLTLKRTDFYKSMTSNMNHKEWQDVYHGDGPTKK
VVYLKFIVTNDVLILSFKEK

Sequences:

>Translated_100_residues
MDKSKPHYELDKVKSLIRAGQYRITRVASEGGDKLGFKNTQEIAEFVLTLKRTDFYKSMTSNMNHKEWQDVYHGDGPTKK
VVYLKFIVTNDVLILSFKEK
>Mature_100_residues
MDKSKPHYELDKVKSLIRAGQYRITRVASEGGDKLGFKNTQEIAEFVLTLKRTDFYKSMTSNMNHKEWQDVYHGDGPTKK
VVYLKFIVTNDVLILSFKEK

Specific function: AI-2 controlled regulator that controls biofilm formation. Controls biofilm formation by inducing motility through the activation of qseBC and csrA. This leads to the activation of the master flagellum regulon flhDC, of fliA, motA and crl [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789399, Length=100, Percent_Identity=47, Blast_Score=85, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11646; Mature: 11646

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKSKPHYELDKVKSLIRAGQYRITRVASEGGDKLGFKNTQEIAEFVLTLKRTDFYKSMT
CCCCCCCCHHHHHHHHHHCCCHHEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
SNMNHKEWQDVYHGDGPTKKVVYLKFIVTNDVLILSFKEK
CCCCCHHHHHHHCCCCCCCEEEEEEEEEECCEEEEEEECC
>Mature Secondary Structure
MDKSKPHYELDKVKSLIRAGQYRITRVASEGGDKLGFKNTQEIAEFVLTLKRTDFYKSMT
CCCCCCCCHHHHHHHHHHCCCHHEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
SNMNHKEWQDVYHGDGPTKKVVYLKFIVTNDVLILSFKEK
CCCCCHHHHHHHCCCCCCCEEEEEEEEEECCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]