Click here to switch to the map view.

The map label for this gene is 82703300

Identifier: 82703300

GI number: 82703300

Start: 2478282

End: 2478533

Strand: Reverse

Name: 82703300

Synonym: Nmul_A2182

Alternate gene names: NA

Gene position: 2478533-2478282 (Counterclockwise)

Preceding gene: 82703301

Following gene: 82703299

Centisome position: 77.84

GC content: 53.57

Gene sequence:

>252_bases
ATGGTTCAAGCAATCCTAAGACTTCCTGCTGTTAAAGCTGAGTCCGGCGCATCCCGTTCAACCATTTATCTTCGCATTCA
GCAAGGACTTTGGCCCAAGCCAGTTAGACTTGGCCCGCGTTCTGTAGGCTGGCCTGCCAGCGAAGTAGCCGCCATTAATG
CTGCCCGCATTGCTGGGAAGACAGATGATGAGATACGGGAATTGGTAGCCAAACTGGAAGCCGCCCGTAAAACGGCTGGC
AAGGCGCTGTAA

Upstream 100 bases:

>100_bases
AACTCGCATTGAATACCCGCGACCCTCCGCGCGTATTATCGTATCCGCTTGTGCTATTTAATTGCCAACCATGTTCAACA
ACACCTAAAGAGGTACAAAC

Downstream 100 bases:

>100_bases
GGGGATGGCGATGCGAAATATCAGCACAGCACAAATCGCACCCCTACCGTCAACCCAAAACTCAACGACTGCTCTTATAA
CTTCATGCTCATACGGGAGC

Product: phage transcriptional regulator AlpA

Products: NA

Alternate protein names: Transcriptional Regulator; AlpA-Like Transcriptional Regulator; Prophage CP4-57 Regulatory

Number of amino acids: Translated: 83; Mature: 83

Protein sequence:

>83_residues
MVQAILRLPAVKAESGASRSTIYLRIQQGLWPKPVRLGPRSVGWPASEVAAINAARIAGKTDDEIRELVAKLEAARKTAG
KAL

Sequences:

>Translated_83_residues
MVQAILRLPAVKAESGASRSTIYLRIQQGLWPKPVRLGPRSVGWPASEVAAINAARIAGKTDDEIRELVAKLEAARKTAG
KAL
>Mature_83_residues
MVQAILRLPAVKAESGASRSTIYLRIQQGLWPKPVRLGPRSVGWPASEVAAINAARIAGKTDDEIRELVAKLEAARKTAG
KAL

Specific function: Unknown

COG id: COG3311

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8890; Mature: 8890

Theoretical pI: Translated: 11.31; Mature: 11.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVQAILRLPAVKAESGASRSTIYLRIQQGLWPKPVRLGPRSVGWPASEVAAINAARIAGK
CCCHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
TDDEIRELVAKLEAARKTAGKAL
CHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MVQAILRLPAVKAESGASRSTIYLRIQQGLWPKPVRLGPRSVGWPASEVAAINAARIAGK
CCCHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
TDDEIRELVAKLEAARKTAGKAL
CHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA