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The map label for this gene is radC [C]

Identifier: 82703257

GI number: 82703257

Start: 2431775

End: 2432449

Strand: Direct

Name: radC [C]

Synonym: Nmul_A2138

Alternate gene names: 82703257

Gene position: 2431775-2432449 (Clockwise)

Preceding gene: 82703253

Following gene: 82703258

Centisome position: 76.37

GC content: 56.59

Gene sequence:

>675_bases
ATGTCGATTTCAGACTGGCCCGAAGCCGAGCGCCCACGGGAAAAACTCCTGAAGAACGGGCCCGCATACCTTTCCGATGC
GGAATTGCTGGCGATATTCCTGCGTACGGGCATCGCCGGCAAGAGCGCGGTCGATCTGGCAAGAGAACTGCTCAAACGTT
TCAGGGGTTTGACGGGGCTCTTTGCCGCAGATCAAGGCGCATTCTGCCAGGTGCCGGGAATGGGGCCGGCGAAGTTCGCG
CAGTTACAGGCAGTGCTGGAAATGGCGCGGCGCGCGCTTGAAGAAGAATTGAAAAGCAGCGATGCGATGGATTCGCCGGG
ACCTGTCCGGGCCTTTTTGCGCCTGAGCCTCGAAGGGAAGGAGCACGAGGTCTTCGTAAGCATCTTTCTTGATGCACGGA
ATCGGGTCATTGCAACCGAAGAACTGTTCCAGGGCACCCTTACGCAAACCAGCGTTTACCCGCGTGAAGTGGTAAAACGG
GCACTTCATCATAATGCCGCGGCTGTGATCTTTGCACATAATCATCCTTCGGGTGCGGCTGAGCCAAGCCACGCAGATGC
GGTTCTCACGCAATCCCTGAAGCAGGCGCTTCTGCTCGTCGATGTGAGAGTACTGGATCATTTTATTGTTGGAAGGGGCG
CGACCCTATCGTTTGCCGAACAGGGATTGATTTGA

Upstream 100 bases:

>100_bases
GCTTTACGGGCGATATATTCTTCAGCTACAGTTTTTTCACAAACTGACGTTTAAGCGAGGGAATCCCTGAACAATTCCCC
GCTACACTGCTACATTTACT

Downstream 100 bases:

>100_bases
TTTGAGGAAATCCCGAAAATCGGGATATAATATTCGTTTTTCCGCTTTCGGACAGGATCAATCATGGCACGAGTATGTGA
AGTTACCGGGAAGAAGCCCA

Product: DNA repair protein RadC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 223

Protein sequence:

>224_residues
MSISDWPEAERPREKLLKNGPAYLSDAELLAIFLRTGIAGKSAVDLARELLKRFRGLTGLFAADQGAFCQVPGMGPAKFA
QLQAVLEMARRALEEELKSSDAMDSPGPVRAFLRLSLEGKEHEVFVSIFLDARNRVIATEELFQGTLTQTSVYPREVVKR
ALHHNAAAVIFAHNHPSGAAEPSHADAVLTQSLKQALLLVDVRVLDHFIVGRGATLSFAEQGLI

Sequences:

>Translated_224_residues
MSISDWPEAERPREKLLKNGPAYLSDAELLAIFLRTGIAGKSAVDLARELLKRFRGLTGLFAADQGAFCQVPGMGPAKFA
QLQAVLEMARRALEEELKSSDAMDSPGPVRAFLRLSLEGKEHEVFVSIFLDARNRVIATEELFQGTLTQTSVYPREVVKR
ALHHNAAAVIFAHNHPSGAAEPSHADAVLTQSLKQALLLVDVRVLDHFIVGRGATLSFAEQGLI
>Mature_223_residues
SISDWPEAERPREKLLKNGPAYLSDAELLAIFLRTGIAGKSAVDLARELLKRFRGLTGLFAADQGAFCQVPGMGPAKFAQ
LQAVLEMARRALEEELKSSDAMDSPGPVRAFLRLSLEGKEHEVFVSIFLDARNRVIATEELFQGTLTQTSVYPREVVKRA
LHHNAAAVIFAHNHPSGAAEPSHADAVLTQSLKQALLLVDVRVLDHFIVGRGATLSFAEQGLI

Specific function: Involved In DNA Repair. [C]

COG id: COG2003

COG function: function code L; DNA repair proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0758 family

Homologues:

Organism=Escherichia coli, GI87082300, Length=213, Percent_Identity=47.887323943662, Blast_Score=212, Evalue=2e-56,
Organism=Escherichia coli, GI2367100, Length=156, Percent_Identity=51.9230769230769, Blast_Score=139, Evalue=2e-34,
Organism=Escherichia coli, GI1788312, Length=151, Percent_Identity=48.3443708609272, Blast_Score=135, Evalue=3e-33,
Organism=Escherichia coli, GI1788997, Length=161, Percent_Identity=45.9627329192547, Blast_Score=132, Evalue=1e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2138_NITMU (Q2Y740)

Other databases:

- EMBL:   CP000103
- RefSeq:   YP_412823.1
- ProteinModelPortal:   Q2Y740
- SMR:   Q2Y740
- STRING:   Q2Y740
- GeneID:   3784764
- GenomeReviews:   CP000103_GR
- KEGG:   nmu:Nmul_A2138
- eggNOG:   COG2003
- HOGENOM:   HBG751042
- OMA:   HAAMAHE
- PhylomeDB:   Q2Y740
- ProtClustDB:   PRK00024
- BioCyc:   NMUL323848:NMUL_A2138-MONOMER
- InterPro:   IPR010994
- InterPro:   IPR001405
- InterPro:   IPR020891
- TIGRFAMs:   TIGR00608

Pfam domain/function: PF04002 DUF2466; SSF47781 RuvA_2_like

EC number: NA

Molecular weight: Translated: 24437; Mature: 24306

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: PS01302 UPF0758

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSISDWPEAERPREKLLKNGPAYLSDAELLAIFLRTGIAGKSAVDLARELLKRFRGLTGL
CCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHH
FAADQGAFCQVPGMGPAKFAQLQAVLEMARRALEEELKSSDAMDSPGPVRAFLRLSLEGK
HCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCC
EHEVFVSIFLDARNRVIATEELFQGTLTQTSVYPREVVKRALHHNAAAVIFAHNHPSGAA
CCEEEEEEEECCCCCEEEHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEEECCCCCCC
EPSHADAVLTQSLKQALLLVDVRVLDHFIVGRGATLSFAEQGLI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCC
>Mature Secondary Structure 
SISDWPEAERPREKLLKNGPAYLSDAELLAIFLRTGIAGKSAVDLARELLKRFRGLTGL
CCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHH
FAADQGAFCQVPGMGPAKFAQLQAVLEMARRALEEELKSSDAMDSPGPVRAFLRLSLEGK
HCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCC
EHEVFVSIFLDARNRVIATEELFQGTLTQTSVYPREVVKRALHHNAAAVIFAHNHPSGAA
CCEEEEEEEECCCCCEEEHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEEECCCCCCC
EPSHADAVLTQSLKQALLLVDVRVLDHFIVGRGATLSFAEQGLI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA