| Definition | Nitrosospira multiformis ATCC 25196 chromosome, complete genome. |
|---|---|
| Accession | NC_007614 |
| Length | 3,184,243 |
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The map label for this gene is 82703169
Identifier: 82703169
GI number: 82703169
Start: 2341471
End: 2343996
Strand: Reverse
Name: 82703169
Synonym: Nmul_A2049
Alternate gene names: NA
Gene position: 2343996-2341471 (Counterclockwise)
Preceding gene: 82703170
Following gene: 82703168
Centisome position: 73.61
GC content: 58.51
Gene sequence:
>2526_bases TTGAAATCCAGCGATCTGCCAAAGCCGGAGGATGAGTGGCGCCATTATGCGGACAACCTCATTCTCGCCATCGAGCGCGG ATTCCTGCATACGCACTACTGCGTCGACTTTCAGCTGCTTATTCGGATAGGAAACCTCATTCGGCTGTGCCTGAAAGCCA CCGATCAAGGGTATCAAGTCGCCGCCGACGTCACGGCGGCGCGGCTTAATGCCATCCTGACCCAGCCGATTCTACTACCG CCACGGCTCCTGAGGGGACGCTGCAGCGAGAATTGCAAGACGCCGAACAAGATGCAGCTGCCCACGGTCAAGCCCGATGC TGTCGCCGCCAGCCGCAATCCCTGTGAATGTGCTTGCGACGAGTCTTGCCAGAAGCCTAGCAACTTCTGCATATGCGTGA AGCCCTACATCGGCGATCTGTTCCTCATCAAGGAGGAGCTTGCGCGCTTCGAGGCCGGCGATATCGCCGACATCGAGAAT ATTCTCGCAGGTGAGAAGAAGCTGCGCCGGCATCGCACGCTGACCCGCTCGGAGTCGACCACGGAATCCGAAACCGACAC CACCACATCGGAAGAGCGCGATCACGAGGTCAACGAGAAGTTCAGCCTGCAATCCGAGGTCAAAAGCACAGTCGACGAGA AAGTGGGCATCGATGCGGGCGTGACCGCCACGGTCAAATACGGTGATGCGGTGACTATCACACCGCACGCCAACGTGACG GCGAACTTCGCCAAATCGGAGTCGCAGAGCACGGCACGTTCCTATTCCAAGGATCTCGTCGATCGCTCGGTTTCGAAGGT TGAGGAGAAAGTGCGCAAGCTGCAGATCAGCAAGGTATTGAGTGAAGTCGAGGAGAAGAACGAGCATTCCATCGACAATA CCCAGGCGGGCGCCGATCACCGCGCCGGGATCTATTACTGGGTCAATAAGGTGAGCCACGCCCAGGTCTACAACTACGGC AAGCATATGATGTTCGACGTCATCGTGCCGGAGCCGGCCGCAATCTTCAAGAAGCTCTACGAGCTCAAGCTCGCCAGCGA CAAGAATGCGAAGGCGCCGCCGAAACCCGAGGCCACGCCGCAGGCGATCCTGCGCAATACTTATGGCGCCCTGCTCAACC AGTACGGCATCGCCACGACGGATGAGGTCCAGCCGCCGGATCCGACGGTGTGCGTGCAGGTCGCTTTCAGCCAGAATGTG CCACAACCGGACAACGAGAAGACTGTGGCGTTCTCGTCCAACGAGTTCAAATCGCCGGACATCCCCAAGGGTTACAAGGC CACCGCGATGGACTACGACATCCGCTGCTCCATCGGGCACCCGTTAAGCACCCCCCAGGACGACCAGGCCGCGATATCGG TGAACGTGGGGAATATCTGCCTGATGTTCGACGAGCTCAACGAGTTCGCTTCGGGCGGCGGCCAGTCGAACAAGAACTGG GTCAGCACCGGCAATATGCCCATGAAGGGCGAGGAGGGCGCGGTCACCGTGGCGCTAGCGGGATTTTCGAGCCTGCCGTT GTCCTTGAGCGGCTCCATCAGCATCACCTGCACGCTCACCGACGAAGCCTTCGAGAAATGGCAGGCGCAGATCTACAACT TGATTATGACCGACTACAACCGCAAGCTCGATGCCTACAACGCCACCATCAACAAGGATGACCAGCTGTTCCAGATCAAG GGCAGGAATCCCTTCCTCAATCGCGAGATCGAACGCAACGAATTCAAGCGCAATATCATCGCCATTTTGATGTGCAACTA CTTCAATGGCGTCGGTTCCATGATGGAACGCGTAGCGCCCTGCGGCTACCCGGAAATCAACTTCGAGCAGCTCGAAAAGG ACACTCCGGTGATCCAGTTCTTCGAACAGGTGTTCGAGTGGGAATATGTGACCTATCTCTTCTACCACAGTATGTGGGCG CGCAAGTGCAAATGGGCGGACCTGATCGATGAGGACTCCGGGGATCTCCTGTTCGACAAGTTTCTGATGTCCGGCGCCGC GCGCGTGCAGGTTCCAGTGCGGCCCGGACTCGAGTCGGTGTTCAGCTGGTTCCTGAAGACCGGCCAGATCTGGGGCGCCA CCGGCGAGCCGCCGGCCCCAGGCGATGATGACTACGTGGCCATGATCCAGGAGCTGAAAGAAGCCGATCAATGCGACTAC AACGACCGGCCGGGGCTGATCGCGGCGGTGCAGGGCAGCGACACCCTGACGCTGACGGACAGCAACTTCTATTGGGATCT CATCAATGACCAACCGGCGACGTTGACGCTCGACAATGACGTCGACCGCGAGATTCTGGTGAACTTCAAGGTCTACCGGA TCGTCAAGGTGGAGCAGACCACTGTCGGAGACAATTCGACTTGGACGATCATTATCGACAAACCCTACCCCGATGCCAGC GGGAACAATATGAAGCATGCCGTGGGTGCGGTGTTCGTGGGGGCTCCCTGGGAGATCGTGGTGCCCACCGAACTCGTGTA TCTGCGCAACCGGCAGGATTTGTTGCCCACCTATCCGCTCCCCTGA
Upstream 100 bases:
>100_bases ACTCGAAATCGCTCAACCCCGTCGTGCTTGCCCTCTACAATTGGCTGAATTTCAAGGCGCGACCGCTTAAACTGGAGGAC TTCAAGAACTTCGTCGCTAC
Downstream 100 bases:
>100_bases CCCCCATGGCCGGCGGCGATGACTACAGCAGCCTGCAGCAACCGTCTGGCGGCTATGCCGCCGCTGGCGACGGTATGGCA AGCTACGCCGGATCTCAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 841; Mature: 841
Protein sequence:
>841_residues MKSSDLPKPEDEWRHYADNLILAIERGFLHTHYCVDFQLLIRIGNLIRLCLKATDQGYQVAADVTAARLNAILTQPILLP PRLLRGRCSENCKTPNKMQLPTVKPDAVAASRNPCECACDESCQKPSNFCICVKPYIGDLFLIKEELARFEAGDIADIEN ILAGEKKLRRHRTLTRSESTTESETDTTTSEERDHEVNEKFSLQSEVKSTVDEKVGIDAGVTATVKYGDAVTITPHANVT ANFAKSESQSTARSYSKDLVDRSVSKVEEKVRKLQISKVLSEVEEKNEHSIDNTQAGADHRAGIYYWVNKVSHAQVYNYG KHMMFDVIVPEPAAIFKKLYELKLASDKNAKAPPKPEATPQAILRNTYGALLNQYGIATTDEVQPPDPTVCVQVAFSQNV PQPDNEKTVAFSSNEFKSPDIPKGYKATAMDYDIRCSIGHPLSTPQDDQAAISVNVGNICLMFDELNEFASGGGQSNKNW VSTGNMPMKGEEGAVTVALAGFSSLPLSLSGSISITCTLTDEAFEKWQAQIYNLIMTDYNRKLDAYNATINKDDQLFQIK GRNPFLNREIERNEFKRNIIAILMCNYFNGVGSMMERVAPCGYPEINFEQLEKDTPVIQFFEQVFEWEYVTYLFYHSMWA RKCKWADLIDEDSGDLLFDKFLMSGAARVQVPVRPGLESVFSWFLKTGQIWGATGEPPAPGDDDYVAMIQELKEADQCDY NDRPGLIAAVQGSDTLTLTDSNFYWDLINDQPATLTLDNDVDREILVNFKVYRIVKVEQTTVGDNSTWTIIIDKPYPDAS GNNMKHAVGAVFVGAPWEIVVPTELVYLRNRQDLLPTYPLP
Sequences:
>Translated_841_residues MKSSDLPKPEDEWRHYADNLILAIERGFLHTHYCVDFQLLIRIGNLIRLCLKATDQGYQVAADVTAARLNAILTQPILLP PRLLRGRCSENCKTPNKMQLPTVKPDAVAASRNPCECACDESCQKPSNFCICVKPYIGDLFLIKEELARFEAGDIADIEN ILAGEKKLRRHRTLTRSESTTESETDTTTSEERDHEVNEKFSLQSEVKSTVDEKVGIDAGVTATVKYGDAVTITPHANVT ANFAKSESQSTARSYSKDLVDRSVSKVEEKVRKLQISKVLSEVEEKNEHSIDNTQAGADHRAGIYYWVNKVSHAQVYNYG KHMMFDVIVPEPAAIFKKLYELKLASDKNAKAPPKPEATPQAILRNTYGALLNQYGIATTDEVQPPDPTVCVQVAFSQNV PQPDNEKTVAFSSNEFKSPDIPKGYKATAMDYDIRCSIGHPLSTPQDDQAAISVNVGNICLMFDELNEFASGGGQSNKNW VSTGNMPMKGEEGAVTVALAGFSSLPLSLSGSISITCTLTDEAFEKWQAQIYNLIMTDYNRKLDAYNATINKDDQLFQIK GRNPFLNREIERNEFKRNIIAILMCNYFNGVGSMMERVAPCGYPEINFEQLEKDTPVIQFFEQVFEWEYVTYLFYHSMWA RKCKWADLIDEDSGDLLFDKFLMSGAARVQVPVRPGLESVFSWFLKTGQIWGATGEPPAPGDDDYVAMIQELKEADQCDY NDRPGLIAAVQGSDTLTLTDSNFYWDLINDQPATLTLDNDVDREILVNFKVYRIVKVEQTTVGDNSTWTIIIDKPYPDAS GNNMKHAVGAVFVGAPWEIVVPTELVYLRNRQDLLPTYPLP >Mature_841_residues MKSSDLPKPEDEWRHYADNLILAIERGFLHTHYCVDFQLLIRIGNLIRLCLKATDQGYQVAADVTAARLNAILTQPILLP PRLLRGRCSENCKTPNKMQLPTVKPDAVAASRNPCECACDESCQKPSNFCICVKPYIGDLFLIKEELARFEAGDIADIEN ILAGEKKLRRHRTLTRSESTTESETDTTTSEERDHEVNEKFSLQSEVKSTVDEKVGIDAGVTATVKYGDAVTITPHANVT ANFAKSESQSTARSYSKDLVDRSVSKVEEKVRKLQISKVLSEVEEKNEHSIDNTQAGADHRAGIYYWVNKVSHAQVYNYG KHMMFDVIVPEPAAIFKKLYELKLASDKNAKAPPKPEATPQAILRNTYGALLNQYGIATTDEVQPPDPTVCVQVAFSQNV PQPDNEKTVAFSSNEFKSPDIPKGYKATAMDYDIRCSIGHPLSTPQDDQAAISVNVGNICLMFDELNEFASGGGQSNKNW VSTGNMPMKGEEGAVTVALAGFSSLPLSLSGSISITCTLTDEAFEKWQAQIYNLIMTDYNRKLDAYNATINKDDQLFQIK GRNPFLNREIERNEFKRNIIAILMCNYFNGVGSMMERVAPCGYPEINFEQLEKDTPVIQFFEQVFEWEYVTYLFYHSMWA RKCKWADLIDEDSGDLLFDKFLMSGAARVQVPVRPGLESVFSWFLKTGQIWGATGEPPAPGDDDYVAMIQELKEADQCDY NDRPGLIAAVQGSDTLTLTDSNFYWDLINDQPATLTLDNDVDREILVNFKVYRIVKVEQTTVGDNSTWTIIIDKPYPDAS GNNMKHAVGAVFVGAPWEIVVPTELVYLRNRQDLLPTYPLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 94180; Mature: 94180
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSSDLPKPEDEWRHYADNLILAIERGFLHTHYCVDFQLLIRIGNLIRLCLKATDQGYQV CCCCCCCCCHHHHHHHHCCEEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEE AADVTAARLNAILTQPILLPPRLLRGRCSENCKTPNKMQLPTVKPDAVAASRNPCECACD EHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCC ESCQKPSNFCICVKPYIGDLFLIKEELARFEAGDIADIENILAGEKKLRRHRTLTRSEST HHCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC TESETDTTTSEERDHEVNEKFSLQSEVKSTVDEKVGIDAGVTATVKYGDAVTITPHANVT CCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCEEEECCCCCEE ANFAKSESQSTARSYSKDLVDRSVSKVEEKVRKLQISKVLSEVEEKNEHSIDNTQAGADH EHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC RAGIYYWVNKVSHAQVYNYGKHMMFDVIVPEPAAIFKKLYELKLASDKNAKAPPKPEATP CCEEEEEECCCCHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCH QAILRNTYGALLNQYGIATTDEVQPPDPTVCVQVAFSQNVPQPDNEKTVAFSSNEFKSPD HHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEECCCCCCCCC IPKGYKATAMDYDIRCSIGHPLSTPQDDQAAISVNVGNICLMFDELNEFASGGGQSNKNW CCCCCEEEEECEEEEEECCCCCCCCCCCCEEEEEECCCEEEEHHHHHHHHCCCCCCCCCE VSTGNMPMKGEEGAVTVALAGFSSLPLSLSGSISITCTLTDEAFEKWQAQIYNLIMTDYN EECCCCCCCCCCCEEEEEEECCCCCCEEECCCEEEEEEECHHHHHHHHHHHHHHHHHHCC RKLDAYNATINKDDQLFQIKGRNPFLNREIERNEFKRNIIAILMCNYFNGVGSMMERVAP CCCEEEECCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC CGYPEINFEQLEKDTPVIQFFEQVFEWEYVTYLFYHSMWARKCKWADLIDEDSGDLLFDK CCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHH FLMSGAARVQVPVRPGLESVFSWFLKTGQIWGATGEPPAPGDDDYVAMIQELKEADQCDY HHHCCCCEEEEECCCCHHHHHHHHHHCCCEECCCCCCCCCCCCHHHHHHHHHHHHHCCCC NDRPGLIAAVQGSDTLTLTDSNFYWDLINDQPATLTLDNDVDREILVNFKVYRIVKVEQT CCCCCEEEEEECCCEEEEECCCEEEEEECCCCCEEEECCCCCCEEEEEEEEEEEEEEEEE TVGDNSTWTIIIDKPYPDASGNNMKHAVGAVFVGAPWEIVVPTELVYLRNRQDLLPTYPL ECCCCCEEEEEEECCCCCCCCCCCHHHHEEEEECCCEEEECCCEEEEECCCCCCCCCCCC P C >Mature Secondary Structure MKSSDLPKPEDEWRHYADNLILAIERGFLHTHYCVDFQLLIRIGNLIRLCLKATDQGYQV CCCCCCCCCHHHHHHHHCCEEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEE AADVTAARLNAILTQPILLPPRLLRGRCSENCKTPNKMQLPTVKPDAVAASRNPCECACD EHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCC ESCQKPSNFCICVKPYIGDLFLIKEELARFEAGDIADIENILAGEKKLRRHRTLTRSEST HHCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC TESETDTTTSEERDHEVNEKFSLQSEVKSTVDEKVGIDAGVTATVKYGDAVTITPHANVT CCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCEEEECCCCCEE ANFAKSESQSTARSYSKDLVDRSVSKVEEKVRKLQISKVLSEVEEKNEHSIDNTQAGADH EHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC RAGIYYWVNKVSHAQVYNYGKHMMFDVIVPEPAAIFKKLYELKLASDKNAKAPPKPEATP CCEEEEEECCCCHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCH QAILRNTYGALLNQYGIATTDEVQPPDPTVCVQVAFSQNVPQPDNEKTVAFSSNEFKSPD HHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEECCCCCCCCC IPKGYKATAMDYDIRCSIGHPLSTPQDDQAAISVNVGNICLMFDELNEFASGGGQSNKNW CCCCCEEEEECEEEEEECCCCCCCCCCCCEEEEEECCCEEEEHHHHHHHHCCCCCCCCCE VSTGNMPMKGEEGAVTVALAGFSSLPLSLSGSISITCTLTDEAFEKWQAQIYNLIMTDYN EECCCCCCCCCCCEEEEEEECCCCCCEEECCCEEEEEEECHHHHHHHHHHHHHHHHHHCC RKLDAYNATINKDDQLFQIKGRNPFLNREIERNEFKRNIIAILMCNYFNGVGSMMERVAP CCCEEEECCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC CGYPEINFEQLEKDTPVIQFFEQVFEWEYVTYLFYHSMWARKCKWADLIDEDSGDLLFDK CCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHH FLMSGAARVQVPVRPGLESVFSWFLKTGQIWGATGEPPAPGDDDYVAMIQELKEADQCDY HHHCCCCEEEEECCCCHHHHHHHHHHCCCEECCCCCCCCCCCCHHHHHHHHHHHHHCCCC NDRPGLIAAVQGSDTLTLTDSNFYWDLINDQPATLTLDNDVDREILVNFKVYRIVKVEQT CCCCCEEEEEECCCEEEEECCCEEEEEECCCCCEEEECCCCCCEEEEEEEEEEEEEEEEE TVGDNSTWTIIIDKPYPDASGNNMKHAVGAVFVGAPWEIVVPTELVYLRNRQDLLPTYPL ECCCCCEEEEEEECCCCCCCCCCCHHHHEEEEECCCEEEECCCEEEEECCCCCCCCCCCC P C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA