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The map label for this gene is yafQ [C]

Identifier: 82703155

GI number: 82703155

Start: 2329356

End: 2329637

Strand: Direct

Name: yafQ [C]

Synonym: Nmul_A2035

Alternate gene names: 82703155

Gene position: 2329356-2329637 (Clockwise)

Preceding gene: 82703154

Following gene: 82703156

Centisome position: 73.15

GC content: 48.94

Gene sequence:

>282_bases
ATGCGCCGGATTAAGTTTTCGCACACCTTCAAGCGCGATTTCCGGCGCGTGAAGTCTCAGTCACCACATCGGGACATTGA
CTCTCTGCTGAAAACTACAATGGACTTGTTGGTAACTGATATGCCTTTGCCAGCAAGCTGCGTTGACCACGCCTTGAAGG
GAAAATTGAAAGGGTATCGGGATTGCCACATTAAACCAGATGTGGTGTTGATTTATCGCAAGCAAGGCAATGACGTTCTC
GAACTCGTACGCCTCGGCTCACATAGCGAACTTGGCATTTAG

Upstream 100 bases:

>100_bases
TTCGAACCGAATGCCGAAACCATTGCCGCCATGGAAGAAGTAGAACGCGAGGAAAATATAACGGCGTGTGAAACAGTCGA
AGAATTAATGGAACAATTGA

Downstream 100 bases:

>100_bases
CGGGTAAGGCAAGTTTAGGGCACCAGCATCCTTCCGCGGCTTCTCGTTTTCAGTTTTGAGAGTTACCCACCCCCTTTCGC
CCCTCTTGCCTTACTCACTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 93; Mature: 93

Protein sequence:

>93_residues
MRRIKFSHTFKRDFRRVKSQSPHRDIDSLLKTTMDLLVTDMPLPASCVDHALKGKLKGYRDCHIKPDVVLIYRKQGNDVL
ELVRLGSHSELGI

Sequences:

>Translated_93_residues
MRRIKFSHTFKRDFRRVKSQSPHRDIDSLLKTTMDLLVTDMPLPASCVDHALKGKLKGYRDCHIKPDVVLIYRKQGNDVL
ELVRLGSHSELGI
>Mature_93_residues
MRRIKFSHTFKRDFRRVKSQSPHRDIDSLLKTTMDLLVTDMPLPASCVDHALKGKLKGYRDCHIKPDVVLIYRKQGNDVL
ELVRLGSHSELGI

Specific function: Unknown

COG id: COG3041

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yafQ [H]

Homologues:

Organism=Escherichia coli, GI1786419, Length=91, Percent_Identity=40.6593406593407, Blast_Score=67, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004386
- InterPro:   IPR007712
- InterPro:   IPR012753 [H]

Pfam domain/function: PF05016 Plasmid_stabil [H]

EC number: NA

Molecular weight: Translated: 10743; Mature: 10743

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRIKFSHTFKRDFRRVKSQSPHRDIDSLLKTTMDLLVTDMPLPASCVDHALKGKLKGYR
CCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCC
DCHIKPDVVLIYRKQGNDVLELVRLGSHSELGI
CCCCCCCEEEEEECCCCHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MRRIKFSHTFKRDFRRVKSQSPHRDIDSLLKTTMDLLVTDMPLPASCVDHALKGKLKGYR
CCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCC
DCHIKPDVVLIYRKQGNDVLELVRLGSHSELGI
CCCCCCCEEEEEECCCCHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]