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The map label for this gene is dcd

Identifier: 82703086

GI number: 82703086

Start: 2259792

End: 2260361

Strand: Reverse

Name: dcd

Synonym: Nmul_A1965

Alternate gene names: 82703086

Gene position: 2260361-2259792 (Counterclockwise)

Preceding gene: 82703087

Following gene: 82703085

Centisome position: 70.99

GC content: 50.35

Gene sequence:

>570_bases
ATGACAATCAAGTCGGATAAGTGGATTCGCCGGATGGCGATGGAGCACGGCATGATCGAGCCGTTCGAGCCGAACCAGGT
CAAGCATGCCCCTGACGGACACAAGATCGTTTCATACGGCACTTCGAGTTATGGGTACGACATTCGCTGCTCGGATGAAT
TCAAGCTGTTCACCAATATCAACTCCGCCATCGTGGATCCTAAAAACTTCGATTCCAACTCCTTTGTCGACGTGAAAAGC
AACATCTGTCTTATTCCGCCCAATTCCTTTGCGCTTGCCCGCACAGTTGAATACTTTCGCATTCCGAGAAATGTATTGAC
CATTTGCCTCGGAAAATCCACTTATGCCCGTTGCGGCATCATTGTCAACGTCACCCCCTTCGAGCCGGAGTGGGAAGGTT
TCGTTACACTGGAGTTTTCCAATACCACACCTCTTCCCGCAAAGATTTACGCGAATGAAGGGGTAGCGCAGGTAATCTTT
TTCGAATCTGACGAGATCTGCGAGACCTCTTACAAGGACAGGGGGGGGAAATACCAGGGGCAGCATGGGGTGACACTGCC
AAAAATCTGA

Upstream 100 bases:

>100_bases
GAAATGGAAAGATGATCTCTGGAAGGAGGCGGGGAGGTTTGGCTGCTTTCCGTCTTCCCCCGCTTGTACATTCTGTTCAC
CTCGCATTCTTTTTTTCAAC

Downstream 100 bases:

>100_bases
ACACATCCGATCCTTCCCTCACAAGCCTGTCCCAAGCTTCTGAGGGGGTCTAAGGGCTTGTCCTGAACACCGTTCGATCC
TCGATCCATCAACAGCCTCG

Product: deoxycytidine triphosphate deaminase

Products: NA

Alternate protein names: dCTP deaminase

Number of amino acids: Translated: 189; Mature: 188

Protein sequence:

>189_residues
MTIKSDKWIRRMAMEHGMIEPFEPNQVKHAPDGHKIVSYGTSSYGYDIRCSDEFKLFTNINSAIVDPKNFDSNSFVDVKS
NICLIPPNSFALARTVEYFRIPRNVLTICLGKSTYARCGIIVNVTPFEPEWEGFVTLEFSNTTPLPAKIYANEGVAQVIF
FESDEICETSYKDRGGKYQGQHGVTLPKI

Sequences:

>Translated_189_residues
MTIKSDKWIRRMAMEHGMIEPFEPNQVKHAPDGHKIVSYGTSSYGYDIRCSDEFKLFTNINSAIVDPKNFDSNSFVDVKS
NICLIPPNSFALARTVEYFRIPRNVLTICLGKSTYARCGIIVNVTPFEPEWEGFVTLEFSNTTPLPAKIYANEGVAQVIF
FESDEICETSYKDRGGKYQGQHGVTLPKI
>Mature_188_residues
TIKSDKWIRRMAMEHGMIEPFEPNQVKHAPDGHKIVSYGTSSYGYDIRCSDEFKLFTNINSAIVDPKNFDSNSFVDVKSN
ICLIPPNSFALARTVEYFRIPRNVLTICLGKSTYARCGIIVNVTPFEPEWEGFVTLEFSNTTPLPAKIYANEGVAQVIFF
ESDEICETSYKDRGGKYQGQHGVTLPKI

Specific function: De novo synthesis of thymidylate. [C]

COG id: COG0717

COG function: function code F; Deoxycytidine deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dCTP deaminase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): DCD_NITMU (Q2Y7L1)

Other databases:

- EMBL:   CP000103
- RefSeq:   YP_412652.1
- ProteinModelPortal:   Q2Y7L1
- SMR:   Q2Y7L1
- STRING:   Q2Y7L1
- GeneID:   3784988
- GenomeReviews:   CP000103_GR
- KEGG:   nmu:Nmul_A1965
- eggNOG:   COG0717
- HOGENOM:   HBG553199
- OMA:   MEYFRIP
- PhylomeDB:   Q2Y7L1
- ProtClustDB:   PRK00416
- BioCyc:   NMUL323848:NMUL_A1965-MONOMER
- HAMAP:   MF_00146
- InterPro:   IPR011962
- InterPro:   IPR008180
- TIGRFAMs:   TIGR02274

Pfam domain/function: PF00692 dUTPase

EC number: =3.5.4.13

Molecular weight: Translated: 21361; Mature: 21229

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIKSDKWIRRMAMEHGMIEPFEPNQVKHAPDGHKIVSYGTSSYGYDIRCSDEFKLFTNI
CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEECCCEEEEECC
NSAIVDPKNFDSNSFVDVKSNICLIPPNSFALARTVEYFRIPRNVLTICLGKSTYARCGI
CCEEECCCCCCCCCEEEECCCEEEECCCCCCHHHHHHHHHCCCHHEEEEECCCCCCEEEE
IVNVTPFEPEWEGFVTLEFSNTTPLPAKIYANEGVAQVIFFESDEICETSYKDRGGKYQG
EEEECCCCCCCCEEEEEEECCCCCCCEEEEECCCEEEEEEECCCCHHHCCHHCCCCCCCC
QHGVTLPKI
CCCCCCCCC
>Mature Secondary Structure 
TIKSDKWIRRMAMEHGMIEPFEPNQVKHAPDGHKIVSYGTSSYGYDIRCSDEFKLFTNI
CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEECCCEEEEECC
NSAIVDPKNFDSNSFVDVKSNICLIPPNSFALARTVEYFRIPRNVLTICLGKSTYARCGI
CCEEECCCCCCCCCEEEECCCEEEECCCCCCHHHHHHHHHCCCHHEEEEECCCCCCEEEE
IVNVTPFEPEWEGFVTLEFSNTTPLPAKIYANEGVAQVIFFESDEICETSYKDRGGKYQG
EEEECCCCCCCCEEEEEEECCCCCCCEEEEECCCEEEEEEECCCCHHHCCHHCCCCCCCC
QHGVTLPKI
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA