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The map label for this gene is xcpS [H]

Identifier: 82703025

GI number: 82703025

Start: 2193591

End: 2194796

Strand: Direct

Name: xcpS [H]

Synonym: Nmul_A1904

Alternate gene names: 82703025

Gene position: 2193591-2194796 (Clockwise)

Preceding gene: 82703024

Following gene: 82703037

Centisome position: 68.89

GC content: 59.45

Gene sequence:

>1206_bases
ATGGAAGCGTACCGCTACGAAGCGCTTGATCCCGAAGGCCGCAAGGTAACGGGTGTGCTGCAGGCTGATACCGCGCGCCA
GGCGCGGGCACAGTTGCGCGCGCAAGGCTTGCTGCCTTCGACCGTCGATCAGGTCCGCGCTCGCGAGGGCGGTCAGGCAC
CCTGGGTCCGAGGCCTGCGTCCGGAGGAGCTGAATTTGCTGACACGGCAGATGGCTACTTTGCTGACCGCCGGTCTGACA
GTCGAGCAGTCGCTTGCTGCACTGATCGAATCCGCCGAGGAGCCGATGACACGCGAAGTGCTCGGCGGTGTCAAAACAGA
GGTGATCGCGGGGCTTTCCCTCTCCGCCGCGCTGGGCAGCTACAGCAGGAGTTTTCCCGATTTCTATCGGGCGCTGGTGC
ATGGTGGGGAAGAATCGGGCACATTGCCGCTGGTACTGCGTCATCTTGCCGAGTATCTCGATGCACGTCAGACACTAAAA
CAGAAAACCAGTCTTGCGCTCCTTTACCCGGCACTGGTGACCATCATTGCCATTATCATTGTTGCCGGCCTGCTCATGTA
TGTGGTTCCCCAGGTAGTGCAGGTATTCCAGCATTCTCGCCAGAGCCTGCCCCTCCTGACTCGCGCACTGATCGGGTTGA
GTGATTTCCTTCTCATGTCATGGCCTTATCTGATTATTGCCATTGTCGGCGGGGCACTTTCCGCACGCGTCGCGCTACGG
CATGAGAACATCAGATACCGATGGCACGCTCTGCTGCTGCGCACCGCATGGCTGGGATCGTTGATTCGCAGCAGCAACAC
ATCCCGTTTCGCCAGCACGCTTTCCATTCTGGTCGGAGGAGGTGTGCCGCTTCTTAAAGCTCTCAGCTCCGGTGCCCGCG
TGATGAGCAGCATGGTCATGCGTAAAGCGATCGAAAATACCATCGAACAGGTCCGCGAAGGCGCGAGCCTCTCCAGAGCG
CTGCGGGAAACCCGCGTGTTTCCGCCCCTGCTTGTGCATCTGGTGGCAAGCGGGGAAATGAGCGGCAAGCTGAAAGAAAT
GCTCGAACGCGCCGCCCAGCTCGAAGCCCAGGCGCTGGAACGGCGACTGGGCGTCTTTTTAACGCTGCTGGAACCAGTAA
TGATCCTGGTAATGGGGGGCGTGGTGCTGATGATCGTGCTTGCCATACTGCTCCCCATCATGGAAATCAACCAGCTGGTG
CATTAG

Upstream 100 bases:

>100_bases
CGGAATGCGCTCGTTACGTGACGACGGCATGCGCCTCGCTACCCAGGGCATCACCAGCCTGGAGGAAGTCGTGCGTGTAA
CACGCGAATAGCAGTTCCAT

Downstream 100 bases:

>100_bases
CAATGAGACGGCGTGAAAAACAGCACCTTTATTCGGCAGGAGGTGTAGAAAAGAGGCCGATAATGCGGAACTGAAAGGAA
ACCCCTCCGGCTAACCTAAT

Product: general secretion pathway protein F

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 401; Mature: 401

Protein sequence:

>401_residues
MEAYRYEALDPEGRKVTGVLQADTARQARAQLRAQGLLPSTVDQVRAREGGQAPWVRGLRPEELNLLTRQMATLLTAGLT
VEQSLAALIESAEEPMTREVLGGVKTEVIAGLSLSAALGSYSRSFPDFYRALVHGGEESGTLPLVLRHLAEYLDARQTLK
QKTSLALLYPALVTIIAIIIVAGLLMYVVPQVVQVFQHSRQSLPLLTRALIGLSDFLLMSWPYLIIAIVGGALSARVALR
HENIRYRWHALLLRTAWLGSLIRSSNTSRFASTLSILVGGGVPLLKALSSGARVMSSMVMRKAIENTIEQVREGASLSRA
LRETRVFPPLLVHLVASGEMSGKLKEMLERAAQLEAQALERRLGVFLTLLEPVMILVMGGVVLMIVLAILLPIMEINQLV
H

Sequences:

>Translated_401_residues
MEAYRYEALDPEGRKVTGVLQADTARQARAQLRAQGLLPSTVDQVRAREGGQAPWVRGLRPEELNLLTRQMATLLTAGLT
VEQSLAALIESAEEPMTREVLGGVKTEVIAGLSLSAALGSYSRSFPDFYRALVHGGEESGTLPLVLRHLAEYLDARQTLK
QKTSLALLYPALVTIIAIIIVAGLLMYVVPQVVQVFQHSRQSLPLLTRALIGLSDFLLMSWPYLIIAIVGGALSARVALR
HENIRYRWHALLLRTAWLGSLIRSSNTSRFASTLSILVGGGVPLLKALSSGARVMSSMVMRKAIENTIEQVREGASLSRA
LRETRVFPPLLVHLVASGEMSGKLKEMLERAAQLEAQALERRLGVFLTLLEPVMILVMGGVVLMIVLAILLPIMEINQLV
H
>Mature_401_residues
MEAYRYEALDPEGRKVTGVLQADTARQARAQLRAQGLLPSTVDQVRAREGGQAPWVRGLRPEELNLLTRQMATLLTAGLT
VEQSLAALIESAEEPMTREVLGGVKTEVIAGLSLSAALGSYSRSFPDFYRALVHGGEESGTLPLVLRHLAEYLDARQTLK
QKTSLALLYPALVTIIAIIIVAGLLMYVVPQVVQVFQHSRQSLPLLTRALIGLSDFLLMSWPYLIIAIVGGALSARVALR
HENIRYRWHALLLRTAWLGSLIRSSNTSRFASTLSILVGGGVPLLKALSSGARVMSSMVMRKAIENTIEQVREGASLSRA
LRETRVFPPLLVHLVASGEMSGKLKEMLERAAQLEAQALERRLGVFLTLLEPVMILVMGGVVLMIVLAILLPIMEINQLV
H

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins. Required for the translocation of a variety of enzymes across the outer membrane [H]

COG id: COG1459

COG function: function code NU; Type II secretory pathway, component PulF

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP F family [H]

Homologues:

Organism=Escherichia coli, GI1789724, Length=402, Percent_Identity=37.8109452736318, Blast_Score=270, Evalue=1e-73,
Organism=Escherichia coli, GI1786295, Length=397, Percent_Identity=27.2040302267003, Blast_Score=136, Evalue=3e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003004
- InterPro:   IPR011850
- InterPro:   IPR018076
- InterPro:   IPR001992 [H]

Pfam domain/function: PF00482 GSPII_F [H]

EC number: NA

Molecular weight: Translated: 43872; Mature: 43872

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAYRYEALDPEGRKVTGVLQADTARQARAQLRAQGLLPSTVDQVRAREGGQAPWVRGLR
CCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCC
PEELNLLTRQMATLLTAGLTVEQSLAALIESAEEPMTREVLGGVKTEVIAGLSLSAALGS
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHCCHHHHHHHH
YSRSFPDFYRALVHGGEESGTLPLVLRHLAEYLDARQTLKQKTSLALLYPALVTIIAIII
HHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAGLLMYVVPQVVQVFQHSRQSLPLLTRALIGLSDFLLMSWPYLIIAIVGGALSARVALR
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HENIRYRWHALLLRTAWLGSLIRSSNTSRFASTLSILVGGGVPLLKALSSGARVMSSMVM
HCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
RKAIENTIEQVREGASLSRALRETRVFPPLLVHLVASGEMSGKLKEMLERAAQLEAQALE
HHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
RRLGVFLTLLEPVMILVMGGVVLMIVLAILLPIMEINQLVH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEAYRYEALDPEGRKVTGVLQADTARQARAQLRAQGLLPSTVDQVRAREGGQAPWVRGLR
CCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCC
PEELNLLTRQMATLLTAGLTVEQSLAALIESAEEPMTREVLGGVKTEVIAGLSLSAALGS
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHCCHHHHHHHH
YSRSFPDFYRALVHGGEESGTLPLVLRHLAEYLDARQTLKQKTSLALLYPALVTIIAIII
HHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAGLLMYVVPQVVQVFQHSRQSLPLLTRALIGLSDFLLMSWPYLIIAIVGGALSARVALR
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HENIRYRWHALLLRTAWLGSLIRSSNTSRFASTLSILVGGGVPLLKALSSGARVMSSMVM
HCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
RKAIENTIEQVREGASLSRALRETRVFPPLLVHLVASGEMSGKLKEMLERAAQLEAQALE
HHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
RRLGVFLTLLEPVMILVMGGVVLMIVLAILLPIMEINQLVH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1588814; 10984043 [H]