| Definition | Nitrosospira multiformis ATCC 25196 chromosome, complete genome. |
|---|---|
| Accession | NC_007614 |
| Length | 3,184,243 |
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The map label for this gene is 82702858
Identifier: 82702858
GI number: 82702858
Start: 1983505
End: 1986207
Strand: Reverse
Name: 82702858
Synonym: Nmul_A1735
Alternate gene names: NA
Gene position: 1986207-1983505 (Counterclockwise)
Preceding gene: 82702859
Following gene: 82702857
Centisome position: 62.38
GC content: 56.31
Gene sequence:
>2703_bases TTGAGTGTTGAAACGCAACGCGAATCTCTGCTAAACGCACCCGCGTTGCTGTTCATGAGCGCGGTGGTTCTCATTGCCTT CTGGATATTGTTTCCGCGTCAGCCCGCCTTCAGGGATCCCGCCAACCTGTCAGCAAAAGATGCTTTGTCGGTCGCTTATC TTCGTGTTCTCGTGCAGTCCGATCCGGGTAACGCTCCGCTACGCCTGTCGTTCGTACAGGTACTGACGGAAGCGGGCATG ACCGATGAAGCTGTCCTTGCCATGGAACCTCTGCAGAATGCTCCCGAGTCAGGGTTGACTTACGAGATTCGCCTGGCAGA GTTGAAGCTGGCGCTGCAGCAGCTTTACCGACATCCTCCCCGGGATGTCGAGGCATCACTGCGAAGGCGTATCGGAGAAC TGGTCCCCTTATTGTTGCGCCTGGCGGACAATGACAAAGAGTCGAACCAGGTGGTGTTGCTGGCAGAGCAGTTTGGCGAA CCCTCGGTCGTAGCGGAAACTTTCGAGCAGTTGGCTGGCATGCAGAATGAAACCCGGCAGACAAAATCGCGCTGGCTTGC TTTTGCTGCCAAACAACGGCTTGCAGCCGCACAACCCAGAGCTGCAGCACAAAATTTCTGCCGGGCTTTCACTTTCGAAC GAATAGCCCGGAAGAAAACCGAATTGGCGAAAGCCTGTTTAGGCGCCTATCTCCAGGCGGGAGTCGACCGGGAGGCCTTG AAAGCCGCGATGCAGATCCTTTCCGCTTATAGCTCCTCCAACGCGGACGCGCAGCTGCTGCTCCTGGCGGCGGACGTTGC CCAGCCGATGGGTGACCGCGATCATGCATTGGTTTGGCTGGAGCAGGCAAGCGCACATCTGCCTGCGGATCAGAGGCTTG CGGAACGTGTTGTCCGGTTGCAGGTTTCGATGGGGCTCCTTAGCGAAGGCCTTGCCCGGGCACCCATGCTGCGCGCTTCT CTGATTCCTGGAAGTGAGCGTCAGCGACTGCTTGCCCATTTATATGACTGGAATGGTCAACCCGATGAAGCGCTCGCCTT GTGGTTGTCTTTTGCGCGCCATAAGGCTGATGAAGAGGCTGAAACCCGGGCCTTTGCATTGGCTCAGGCAAAACCGGATA ACGAGGCGATTGTGCAGCTTCTTGAGGCAGTCATGTCCCGCCGCAAGCTGACGACTACCGAAGCGGATGCTTATGTCAAA GCGGGTCTCGCCGTTGCCCAGCCGTCGCGTGTGGAAAAACAGTTGCGACGTCACGCGGAACGATTCGGCAATCCTCCCCC CATCCTTAACGCATTGGTGGAGGTTCTTGTTCTTCAGGGCAAACCGGATGCGGCGCTCACGTTATATGAAGATATGCCGG AAATACAGGATGGGCGTCAGAGGCTTGCATTGGCAAGGCTATATGAGGAAGCCGGCAACACGCAAAAGAGCTTTCAGTTG CTGCTTCGGGACATCGACTCGCCGCCTCCCGCTTCTGCGGAAGAATACTGGTTGCTGCTGGCGAAAGTTTCCACGCAACT GGGACAGGATGCGTACGCCGGTCAAGCCTACGAAAAAGCATTGGCTCTTCGGTCGAACGACGTGGAAATTCTGGAAAACC TGCAACGTCTGGCCCTGCGCCATCACGATGAGAAAAAAAGCGAGCGGCTTGCGCGCTATGGGTGGGAAAGATTGAAGCGG ATCGAGGATTTGCAGCGCCTGATGCGTTTTTCCTGGAAGCGGCGGAATTGGGATGAACTGGATCAGTGGCTCGAGGTTGC GGAAAAACTTCCTTCCGCAGCGCAGGCGCGGGATTACTGGTATTTCCAGTCGATGCGCAGAATGGCGCATGGGGAGCAAA GCGCTGCACGTGGGGCGCTGCAGGAGATCCTGAAATTACAGGCCGCAGATCCGGAAGTCACCGAAGCCATGATCTGGCTA TTGCTGGCATACGAGAAAATTGATCGTGTACTGCTTGATTCCGTCGTTGCGCCCTATCGTGCCCAGACAGCCAGTCAGTC CACGGTTAATCCGGCCTTGGCCGAAGCCTTGGCGGCAGCGGAGCAAGGTTTGGGCAGGCCGGTTCAGGCAGCCGCCTGGT TTTTGCGATCGCTTTCGACCCGGGCGGGGGATTTTCTCTGGATATTGGCCCTGGCGGATAATATGGAATGGGCGGGGTGC CCCGCTCACGCCAACTATGCCCGTTTCCAGGCGCTCGAAATGTTCGCTTCAAGGCAGAATTCCCGGATCGAAGTGAAATA TCCGTCACGCCTCGCCGAATACTTTTTCGGATCAAAGTATCTTCCTCCCAAAAGGGAGGGTACCGAGGATGCAAAGAAAC AGGAGGAATTACAGTCGATTCGGGACCAATGGGGCTTTGGAGGAAAACTGGATAATGCCGACTATTTCGCATTGCGTAGA GAGGTGGAACGGCTTGAGCTGTCACAATGGAAAGATTTTGCAAAGGCAGTCAGGAACAGGAATGAGCGTGAAGTGGAGCG GCAGTTGGCGCTTATTTCGGATCACCTGAAGCGTCAACCGGCGGCCGCATCACATCCGGACATGCTCCCCTTATCCATAG ACGATGTGGATCGCGCGAATCGGTGGTTGGCCGGCGAACCGGAGCCCAACCCGAGCGATTTGGCAACGGAACTGGATATC TGCCGCGAGACGCTGACCAAGATTCGGGAATTTCCTGTAAACAGTGAACCTGCAAAGCGATGA
Upstream 100 bases:
>100_bases TGCGCCTTGAGCATAAATGACACAAAGTTGATACCGCAGGTGAAGGGTGCACATTCCGTTTATACAGTTCCAGGAAACCT GACAGCGGGAAAATTCCGGC
Downstream 100 bases:
>100_bases AGAAACCCTGGCTGGAAGGTATAGAGGTTGTCGATGTAAACACCCCCGTATCTGCGTGGGGCGGCTGGTTTGAAACATTC GTTATAACTGCTGTTGTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 900; Mature: 899
Protein sequence:
>900_residues MSVETQRESLLNAPALLFMSAVVLIAFWILFPRQPAFRDPANLSAKDALSVAYLRVLVQSDPGNAPLRLSFVQVLTEAGM TDEAVLAMEPLQNAPESGLTYEIRLAELKLALQQLYRHPPRDVEASLRRRIGELVPLLLRLADNDKESNQVVLLAEQFGE PSVVAETFEQLAGMQNETRQTKSRWLAFAAKQRLAAAQPRAAAQNFCRAFTFERIARKKTELAKACLGAYLQAGVDREAL KAAMQILSAYSSSNADAQLLLLAADVAQPMGDRDHALVWLEQASAHLPADQRLAERVVRLQVSMGLLSEGLARAPMLRAS LIPGSERQRLLAHLYDWNGQPDEALALWLSFARHKADEEAETRAFALAQAKPDNEAIVQLLEAVMSRRKLTTTEADAYVK AGLAVAQPSRVEKQLRRHAERFGNPPPILNALVEVLVLQGKPDAALTLYEDMPEIQDGRQRLALARLYEEAGNTQKSFQL LLRDIDSPPPASAEEYWLLLAKVSTQLGQDAYAGQAYEKALALRSNDVEILENLQRLALRHHDEKKSERLARYGWERLKR IEDLQRLMRFSWKRRNWDELDQWLEVAEKLPSAAQARDYWYFQSMRRMAHGEQSAARGALQEILKLQAADPEVTEAMIWL LLAYEKIDRVLLDSVVAPYRAQTASQSTVNPALAEALAAAEQGLGRPVQAAAWFLRSLSTRAGDFLWILALADNMEWAGC PAHANYARFQALEMFASRQNSRIEVKYPSRLAEYFFGSKYLPPKREGTEDAKKQEELQSIRDQWGFGGKLDNADYFALRR EVERLELSQWKDFAKAVRNRNEREVERQLALISDHLKRQPAAASHPDMLPLSIDDVDRANRWLAGEPEPNPSDLATELDI CRETLTKIREFPVNSEPAKR
Sequences:
>Translated_900_residues MSVETQRESLLNAPALLFMSAVVLIAFWILFPRQPAFRDPANLSAKDALSVAYLRVLVQSDPGNAPLRLSFVQVLTEAGM TDEAVLAMEPLQNAPESGLTYEIRLAELKLALQQLYRHPPRDVEASLRRRIGELVPLLLRLADNDKESNQVVLLAEQFGE PSVVAETFEQLAGMQNETRQTKSRWLAFAAKQRLAAAQPRAAAQNFCRAFTFERIARKKTELAKACLGAYLQAGVDREAL KAAMQILSAYSSSNADAQLLLLAADVAQPMGDRDHALVWLEQASAHLPADQRLAERVVRLQVSMGLLSEGLARAPMLRAS LIPGSERQRLLAHLYDWNGQPDEALALWLSFARHKADEEAETRAFALAQAKPDNEAIVQLLEAVMSRRKLTTTEADAYVK AGLAVAQPSRVEKQLRRHAERFGNPPPILNALVEVLVLQGKPDAALTLYEDMPEIQDGRQRLALARLYEEAGNTQKSFQL LLRDIDSPPPASAEEYWLLLAKVSTQLGQDAYAGQAYEKALALRSNDVEILENLQRLALRHHDEKKSERLARYGWERLKR IEDLQRLMRFSWKRRNWDELDQWLEVAEKLPSAAQARDYWYFQSMRRMAHGEQSAARGALQEILKLQAADPEVTEAMIWL LLAYEKIDRVLLDSVVAPYRAQTASQSTVNPALAEALAAAEQGLGRPVQAAAWFLRSLSTRAGDFLWILALADNMEWAGC PAHANYARFQALEMFASRQNSRIEVKYPSRLAEYFFGSKYLPPKREGTEDAKKQEELQSIRDQWGFGGKLDNADYFALRR EVERLELSQWKDFAKAVRNRNEREVERQLALISDHLKRQPAAASHPDMLPLSIDDVDRANRWLAGEPEPNPSDLATELDI CRETLTKIREFPVNSEPAKR >Mature_899_residues SVETQRESLLNAPALLFMSAVVLIAFWILFPRQPAFRDPANLSAKDALSVAYLRVLVQSDPGNAPLRLSFVQVLTEAGMT DEAVLAMEPLQNAPESGLTYEIRLAELKLALQQLYRHPPRDVEASLRRRIGELVPLLLRLADNDKESNQVVLLAEQFGEP SVVAETFEQLAGMQNETRQTKSRWLAFAAKQRLAAAQPRAAAQNFCRAFTFERIARKKTELAKACLGAYLQAGVDREALK AAMQILSAYSSSNADAQLLLLAADVAQPMGDRDHALVWLEQASAHLPADQRLAERVVRLQVSMGLLSEGLARAPMLRASL IPGSERQRLLAHLYDWNGQPDEALALWLSFARHKADEEAETRAFALAQAKPDNEAIVQLLEAVMSRRKLTTTEADAYVKA GLAVAQPSRVEKQLRRHAERFGNPPPILNALVEVLVLQGKPDAALTLYEDMPEIQDGRQRLALARLYEEAGNTQKSFQLL LRDIDSPPPASAEEYWLLLAKVSTQLGQDAYAGQAYEKALALRSNDVEILENLQRLALRHHDEKKSERLARYGWERLKRI EDLQRLMRFSWKRRNWDELDQWLEVAEKLPSAAQARDYWYFQSMRRMAHGEQSAARGALQEILKLQAADPEVTEAMIWLL LAYEKIDRVLLDSVVAPYRAQTASQSTVNPALAEALAAAEQGLGRPVQAAAWFLRSLSTRAGDFLWILALADNMEWAGCP AHANYARFQALEMFASRQNSRIEVKYPSRLAEYFFGSKYLPPKREGTEDAKKQEELQSIRDQWGFGGKLDNADYFALRRE VERLELSQWKDFAKAVRNRNEREVERQLALISDHLKRQPAAASHPDMLPLSIDDVDRANRWLAGEPEPNPSDLATELDIC RETLTKIREFPVNSEPAKR
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 101453; Mature: 101322
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVETQRESLLNAPALLFMSAVVLIAFWILFPRQPAFRDPANLSAKDALSVAYLRVLVQS CCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHC DPGNAPLRLSFVQVLTEAGMTDEAVLAMEPLQNAPESGLTYEIRLAELKLALQQLYRHPP CCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHCCCC RDVEASLRRRIGELVPLLLRLADNDKESNQVVLLAEQFGEPSVVAETFEQLAGMQNETRQ CCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHCCCCHHHHHHHHHHHCCCHHHHH TKSRWLAFAAKQRLAAAQPRAAAQNFCRAFTFERIARKKTELAKACLGAYLQAGVDREAL HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH KAAMQILSAYSSSNADAQLLLLAADVAQPMGDRDHALVWLEQASAHLPADQRLAERVVRL HHHHHHHHHHCCCCCCCEEEEEEHHHHCCCCCCCCEEEEEEHHCCCCCHHHHHHHHHHHH QVSMGLLSEGLARAPMLRASLIPGSERQRLLAHLYDWNGQPDEALALWLSFARHKADEEA HHHHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHH ETRAFALAQAKPDNEAIVQLLEAVMSRRKLTTTEADAYVKAGLAVAQPSRVEKQLRRHAE HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCHHHCCHHHHHHHHHHHHH RFGNPPPILNALVEVLVLQGKPDAALTLYEDMPEIQDGRQRLALARLYEEAGNTQKSFQL HCCCCCHHHHHHHHHHHHCCCCCCEEEHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHH LLRDIDSPPPASAEEYWLLLAKVSTQLGQDAYAGQAYEKALALRSNDVEILENLQRLALR HHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHH HHDEKKSERLARYGWERLKRIEDLQRLMRFSWKRRNWDELDQWLEVAEKLPSAAQARDYW HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHH YFQSMRRMAHGEQSAARGALQEILKLQAADPEVTEAMIWLLLAYEKIDRVLLDSVVAPYR HHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHH AQTASQSTVNPALAEALAAAEQGLGRPVQAAAWFLRSLSTRAGDFLWILALADNMEWAGC HHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCC PAHANYARFQALEMFASRQNSRIEVKYPSRLAEYFFGSKYLPPKREGTEDAKKQEELQSI CCCCHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH RDQWGFGGKLDNADYFALRREVERLELSQWKDFAKAVRNRNEREVERQLALISDHLKRQP HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC AAASHPDMLPLSIDDVDRANRWLAGEPEPNPSDLATELDICRETLTKIREFPVNSEPAKR CCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure SVETQRESLLNAPALLFMSAVVLIAFWILFPRQPAFRDPANLSAKDALSVAYLRVLVQS CCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHC DPGNAPLRLSFVQVLTEAGMTDEAVLAMEPLQNAPESGLTYEIRLAELKLALQQLYRHPP CCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHCCCC RDVEASLRRRIGELVPLLLRLADNDKESNQVVLLAEQFGEPSVVAETFEQLAGMQNETRQ CCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHCCCCHHHHHHHHHHHCCCHHHHH TKSRWLAFAAKQRLAAAQPRAAAQNFCRAFTFERIARKKTELAKACLGAYLQAGVDREAL HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH KAAMQILSAYSSSNADAQLLLLAADVAQPMGDRDHALVWLEQASAHLPADQRLAERVVRL HHHHHHHHHHCCCCCCCEEEEEEHHHHCCCCCCCCEEEEEEHHCCCCCHHHHHHHHHHHH QVSMGLLSEGLARAPMLRASLIPGSERQRLLAHLYDWNGQPDEALALWLSFARHKADEEA HHHHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHH ETRAFALAQAKPDNEAIVQLLEAVMSRRKLTTTEADAYVKAGLAVAQPSRVEKQLRRHAE HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCHHHCCHHHHHHHHHHHHH RFGNPPPILNALVEVLVLQGKPDAALTLYEDMPEIQDGRQRLALARLYEEAGNTQKSFQL HCCCCCHHHHHHHHHHHHCCCCCCEEEHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHH LLRDIDSPPPASAEEYWLLLAKVSTQLGQDAYAGQAYEKALALRSNDVEILENLQRLALR HHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHH HHDEKKSERLARYGWERLKRIEDLQRLMRFSWKRRNWDELDQWLEVAEKLPSAAQARDYW HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHH YFQSMRRMAHGEQSAARGALQEILKLQAADPEVTEAMIWLLLAYEKIDRVLLDSVVAPYR HHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHH AQTASQSTVNPALAEALAAAEQGLGRPVQAAAWFLRSLSTRAGDFLWILALADNMEWAGC HHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCC PAHANYARFQALEMFASRQNSRIEVKYPSRLAEYFFGSKYLPPKREGTEDAKKQEELQSI CCCCHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH RDQWGFGGKLDNADYFALRREVERLELSQWKDFAKAVRNRNEREVERQLALISDHLKRQP HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC AAASHPDMLPLSIDDVDRANRWLAGEPEPNPSDLATELDICRETLTKIREFPVNSEPAKR CCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA