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The map label for this gene is lpsB [H]

Identifier: 82702855

GI number: 82702855

Start: 1979521

End: 1981101

Strand: Reverse

Name: lpsB [H]

Synonym: Nmul_A1732

Alternate gene names: 82702855

Gene position: 1981101-1979521 (Counterclockwise)

Preceding gene: 82702856

Following gene: 82702854

Centisome position: 62.22

GC content: 55.34

Gene sequence:

>1581_bases
ATGAGTGTTATCCAGGCAGGGGCGGAGAAGCCCTGGACGGTACGGGCAGCAGGATCGGTTCTGGAACCGGTGGCGGATAT
TGCTCTGCTGCTGGAAGGCACCTATCCTTATGTCCGTGGCGGGGTATCTTCATGGGTCCACCAGATCATAAACGGTTTGC
CGGAATTTACCTTCGCCGTGATCTTTATAGGCGGCAATAAGGAAATGTATGGACCGGCGCAATATCAGTTTCCGCCGAAT
GTGACGCATGTCGAAACGCACTATCTGTTGCACCGCAGCCATGGGAAGCCGCATGCCCGCAAGGGCAGCCGCCAGCCTTT
CCAGGAAATGGAAGAACTGCACGCCATCATGCGGCAATCCGGGAAATTGGCTGACAGGAAAATGATTGATGCGTTTGCGC
GATTGGGCTCCAAGGGTGGCATCAGTCAGGAGGATTTTCTGTATAGCGAAGCTTCCTGGGATTACATTACCCGACAGTAT
AAAGAGCGCTGTACTGAACCCTCGTTTGTGGACTATTTCTGGTCGATACGTGCAATGCATGCACCTTTGTTCGTGCTGGC
CGATATTGCGACCGGGCTTCCACCGGTTCGGGCAGTGCATGCCATTTCGACTGGTTATGCAGGCCTGCTGGGCGCGATGA
TACGGCTGCGGCGAAACATTCCTTTCGTGCTCACCGAGCACGGAATCTATACCAAGGAGCGGAAAATCGACTTGGCGCAG
GCTACCTGGATCCATGATCACAATGACGATGTATGCAATACGCTGCATGAGGAAATGGGATATATCCGGGGCCTCTGGAT
CAGATTCTACGAGCAGCTGGGGCGCATGGCGTACGCGCAGGCTTCGCCCATTATCAGCCTGTATGAAGGGAATCGGTTGA
GACAGATTGCCGACGGAGCAGTCCCGGAAAAAACACGTATCATTACCAACGGCCTCAATGTGGAACGCTATCGCGACGCA
CTCGAAAAAAGACCGGAAAAGATTCCACCGGTGCTGGGACTGGTCGGGCGCGTGGTGCCGATCAAGGATATCAAAACGTT
CATCCGGACATTGCGGATGCTGGTCAAGGAGCGTCCTGACGCGCAAGGATGGGTTGTCGGCCCGGAGGACGAAGATCCGT
TGTATGTGAATGAATGCAAGGAACTGGCCGAAAGTCTCGGCCTGGGGAATCATCTCAGATTCATGGGCTTTCAAAATATG
CTGGAAATTCTGCCCCAGCTTGGCCTGATGGTACTGACCTCGATCAGTGAAGCTCTGCCGCTGGTAATACTCGAGGCTTT
CGCCAGCGGTGTTCCCTGCCTTGCGACGGATGTAGGGTCCTGCCGGGAGCTCATCGAAGGAGCGGCCGAGCAGGACCGGG
CATTGGGGGCGGCGGGTAGTGTGGTGCACATTGCCGATCCAGAAGGCACGGCAAAAGCAGCCCTCGAACTGCTCAACAAC
CCGGAGAAGTGGAGTGCTGCGCAGCAGGCGGGGCTTGCACGCGTGAAACGCTATTATAACGACCAACTCATGTTTTCATC
TTATCGGGAAGTCTACTCGGAAGCCTTGAGTGTACCGCGGCATCCGGCAGTAGCGAACTGA

Upstream 100 bases:

>100_bases
GGCAGCGGAAGTTTACCGAAGCAAAGGCCTGTTTGTCCGCGCTTGCACGTGTTGGGGAGAAAGGGCGGGAACTGGCTCTG
GTAAGAGCATGGTGGAATAA

Downstream 100 bases:

>100_bases
TGTAACTATATGGCCGGTATCGGTTTCGAAATCCGCAAAATCCTGGAGCGCGACAATTACTGGTCGGTGTTGCGAGCCTA
TGGTTATGCGGGCCTGGTCA

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 526; Mature: 525

Protein sequence:

>526_residues
MSVIQAGAEKPWTVRAAGSVLEPVADIALLLEGTYPYVRGGVSSWVHQIINGLPEFTFAVIFIGGNKEMYGPAQYQFPPN
VTHVETHYLLHRSHGKPHARKGSRQPFQEMEELHAIMRQSGKLADRKMIDAFARLGSKGGISQEDFLYSEASWDYITRQY
KERCTEPSFVDYFWSIRAMHAPLFVLADIATGLPPVRAVHAISTGYAGLLGAMIRLRRNIPFVLTEHGIYTKERKIDLAQ
ATWIHDHNDDVCNTLHEEMGYIRGLWIRFYEQLGRMAYAQASPIISLYEGNRLRQIADGAVPEKTRIITNGLNVERYRDA
LEKRPEKIPPVLGLVGRVVPIKDIKTFIRTLRMLVKERPDAQGWVVGPEDEDPLYVNECKELAESLGLGNHLRFMGFQNM
LEILPQLGLMVLTSISEALPLVILEAFASGVPCLATDVGSCRELIEGAAEQDRALGAAGSVVHIADPEGTAKAALELLNN
PEKWSAAQQAGLARVKRYYNDQLMFSSYREVYSEALSVPRHPAVAN

Sequences:

>Translated_526_residues
MSVIQAGAEKPWTVRAAGSVLEPVADIALLLEGTYPYVRGGVSSWVHQIINGLPEFTFAVIFIGGNKEMYGPAQYQFPPN
VTHVETHYLLHRSHGKPHARKGSRQPFQEMEELHAIMRQSGKLADRKMIDAFARLGSKGGISQEDFLYSEASWDYITRQY
KERCTEPSFVDYFWSIRAMHAPLFVLADIATGLPPVRAVHAISTGYAGLLGAMIRLRRNIPFVLTEHGIYTKERKIDLAQ
ATWIHDHNDDVCNTLHEEMGYIRGLWIRFYEQLGRMAYAQASPIISLYEGNRLRQIADGAVPEKTRIITNGLNVERYRDA
LEKRPEKIPPVLGLVGRVVPIKDIKTFIRTLRMLVKERPDAQGWVVGPEDEDPLYVNECKELAESLGLGNHLRFMGFQNM
LEILPQLGLMVLTSISEALPLVILEAFASGVPCLATDVGSCRELIEGAAEQDRALGAAGSVVHIADPEGTAKAALELLNN
PEKWSAAQQAGLARVKRYYNDQLMFSSYREVYSEALSVPRHPAVAN
>Mature_525_residues
SVIQAGAEKPWTVRAAGSVLEPVADIALLLEGTYPYVRGGVSSWVHQIINGLPEFTFAVIFIGGNKEMYGPAQYQFPPNV
THVETHYLLHRSHGKPHARKGSRQPFQEMEELHAIMRQSGKLADRKMIDAFARLGSKGGISQEDFLYSEASWDYITRQYK
ERCTEPSFVDYFWSIRAMHAPLFVLADIATGLPPVRAVHAISTGYAGLLGAMIRLRRNIPFVLTEHGIYTKERKIDLAQA
TWIHDHNDDVCNTLHEEMGYIRGLWIRFYEQLGRMAYAQASPIISLYEGNRLRQIADGAVPEKTRIITNGLNVERYRDAL
EKRPEKIPPVLGLVGRVVPIKDIKTFIRTLRMLVKERPDAQGWVVGPEDEDPLYVNECKELAESLGLGNHLRFMGFQNML
EILPQLGLMVLTSISEALPLVILEAFASGVPCLATDVGSCRELIEGAAEQDRALGAAGSVVHIADPEGTAKAALELLNNP
EKWSAAQQAGLARVKRYYNDQLMFSSYREVYSEALSVPRHPAVAN

Specific function: Acts at transfer of mannose group to a 3-deoxy-D-mono octulonic acid (KDO) via an alpha-1,5 linkage [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 58762; Mature: 58631

Theoretical pI: Translated: 6.84; Mature: 6.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVIQAGAEKPWTVRAAGSVLEPVADIALLLEGTYPYVRGGVSSWVHQIINGLPEFTFAV
CCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHCCCCCEEEE
IFIGGNKEMYGPAQYQFPPNVTHVETHYLLHRSHGKPHARKGSRQPFQEMEELHAIMRQS
EEECCCCCCCCCCCCCCCCCCCEEHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHC
GKLADRKMIDAFARLGSKGGISQEDFLYSEASWDYITRQYKERCTEPSFVDYFWSIRAMH
CCHHHHHHHHHHHHHCCCCCCCHHHHEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH
APLFVLADIATGLPPVRAVHAISTGYAGLLGAMIRLRRNIPFVLTEHGIYTKERKIDLAQ
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHCCHHH
ATWIHDHNDDVCNTLHEEMGYIRGLWIRFYEQLGRMAYAQASPIISLYEGNRLRQIADGA
HHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHCCC
VPEKTRIITNGLNVERYRDALEKRPEKIPPVLGLVGRVVPIKDIKTFIRTLRMLVKERPD
CCCCHHHEECCCCHHHHHHHHHHCCHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCC
AQGWVVGPEDEDPLYVNECKELAESLGLGNHLRFMGFQNMLEILPQLGLMVLTSISEALP
CCCCEECCCCCCCEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVILEAFASGVPCLATDVGSCRELIEGAAEQDRALGAAGSVVHIADPEGTAKAALELLNN
HHHHHHHHCCCCEEHHCHHHHHHHHHCHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCC
PEKWSAAQQAGLARVKRYYNDQLMFSSYREVYSEALSVPRHPAVAN
CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SVIQAGAEKPWTVRAAGSVLEPVADIALLLEGTYPYVRGGVSSWVHQIINGLPEFTFAV
CCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHCCCCCEEEE
IFIGGNKEMYGPAQYQFPPNVTHVETHYLLHRSHGKPHARKGSRQPFQEMEELHAIMRQS
EEECCCCCCCCCCCCCCCCCCCEEHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHC
GKLADRKMIDAFARLGSKGGISQEDFLYSEASWDYITRQYKERCTEPSFVDYFWSIRAMH
CCHHHHHHHHHHHHHCCCCCCCHHHHEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH
APLFVLADIATGLPPVRAVHAISTGYAGLLGAMIRLRRNIPFVLTEHGIYTKERKIDLAQ
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHCCHHH
ATWIHDHNDDVCNTLHEEMGYIRGLWIRFYEQLGRMAYAQASPIISLYEGNRLRQIADGA
HHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHCCC
VPEKTRIITNGLNVERYRDALEKRPEKIPPVLGLVGRVVPIKDIKTFIRTLRMLVKERPD
CCCCHHHEECCCCHHHHHHHHHHCCHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCC
AQGWVVGPEDEDPLYVNECKELAESLGLGNHLRFMGFQNMLEILPQLGLMVLTSISEALP
CCCCEECCCCCCCEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVILEAFASGVPCLATDVGSCRELIEGAAEQDRALGAAGSVVHIADPEGTAKAALELLNN
HHHHHHHHCCCCEEHHCHHHHHHHHHCHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCC
PEKWSAAQQAGLARVKRYYNDQLMFSSYREVYSEALSVPRHPAVAN
CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11157937; 11481430 [H]