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The map label for this gene is bepD [H]

Identifier: 82702852

GI number: 82702852

Start: 1975287

End: 1976378

Strand: Reverse

Name: bepD [H]

Synonym: Nmul_A1728

Alternate gene names: 82702852

Gene position: 1976378-1975287 (Counterclockwise)

Preceding gene: 82702853

Following gene: 82702851

Centisome position: 62.07

GC content: 45.05

Gene sequence:

>1092_bases
ATGAAAATGGTCACTAAATTATCCATCGTTCTAGGCTTAATCGCCACTCTGGTATTGAGTGGATGCCAAAAACACGACAC
ACATGAAGAAATGCCGCACTATGCGGCAACCACACCGTTCCGTGAAGACACTTCCATCCTGGAACCCTATGTCTGTCAGA
TTCGCGCCATCAGACATATTGAAGTCCGCTCTTTGGAAAAGGGCTATTTAACCCATATTTTTATAGACGAAGGGCAATGG
GTAAAAAAGGGACAACCCATGTTCAAAATCATGCCCAACGTCTATCAGGCAGAACTTCTAACTGCGGAAGCTGAAGCGCA
AAATGTGAACATCGAATACCTCAATACCAAGGCCTTGGCTGATAAGAATATCGTATCAGCCAATGAATTGGCTTTGGCAA
AAGCAAAATTAGATAAGGCTAACGCGCAGGTGAACTTGGCGAAAACCCACTTGGGGTTCACCGATATCAGAGCACCCTTT
GATGGGATTACGGATCATTTGGCTGTTAGGATCGGCAGCCTTCTGGATGAAGATGATTTGTTGACGGAGTTGTCTGATAT
CGCCCACTTGTGGGTCTATTTCAACGTCCCGGAAGCTAAATATCTGGATTTTATAAGGCGCGAAAAAGGCAAAACCAATG
AAAAAGTGCAGTTAAGGATGGCAAATGGCGAGATTTACGAGCATACGGGGGTCATCGAGACAATTGTAGGTGATTTTTAT
AATACCTCCGGCAACATTCAGTTTCGTGCCTTGTTCGAGAACCCGGACAGGGTTCTCAGGCATGGTCAGACAGGAACAAT
TCTGATGACCGTACCTTACCCAAACGCCATGCTCATCCCTCAAAAAGCGACGTTCGAAATCATGGATAAAATCTATCTCT
ACGTCGTCAACAAAGAAGAAAAAGTGGAGCAAAGGCTTATCCAGATAGAGGCCGAGTTGCCCCACATGTTTATTGTTAAA
AGCGGCGTGAATGACGGCGAGAGGATTTTGATCGAGGGTATGCGCAAAGTTAGTCCTGGAGACAAGGTTATGATCGATTT
AAAGCCACCCCAAGAGGTTCGCTCAGAGTTGATGAAATTGTATACCGAGTAA

Upstream 100 bases:

>100_bases
AACCTTACACCTTCGTGGTTCTTTCCATTCTGATCGTCCTGTTTGGAATCAGGGCGATACGGCATACCCCAACGGACGTC
TTTCCCACTATCAAGACGGC

Downstream 100 bases:

>100_bases
CCTTTTAGTCAGGATTAAGCCATGTTTGGTATTTTTCTCAAAAGACCTGTGCTGGCGATCGTGTTATCGCTGTTGTTCAT
ATTCATGGGCTTGTTGGCAA

Product: secretion protein HlyD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MKMVTKLSIVLGLIATLVLSGCQKHDTHEEMPHYAATTPFREDTSILEPYVCQIRAIRHIEVRSLEKGYLTHIFIDEGQW
VKKGQPMFKIMPNVYQAELLTAEAEAQNVNIEYLNTKALADKNIVSANELALAKAKLDKANAQVNLAKTHLGFTDIRAPF
DGITDHLAVRIGSLLDEDDLLTELSDIAHLWVYFNVPEAKYLDFIRREKGKTNEKVQLRMANGEIYEHTGVIETIVGDFY
NTSGNIQFRALFENPDRVLRHGQTGTILMTVPYPNAMLIPQKATFEIMDKIYLYVVNKEEKVEQRLIQIEAELPHMFIVK
SGVNDGERILIEGMRKVSPGDKVMIDLKPPQEVRSELMKLYTE

Sequences:

>Translated_363_residues
MKMVTKLSIVLGLIATLVLSGCQKHDTHEEMPHYAATTPFREDTSILEPYVCQIRAIRHIEVRSLEKGYLTHIFIDEGQW
VKKGQPMFKIMPNVYQAELLTAEAEAQNVNIEYLNTKALADKNIVSANELALAKAKLDKANAQVNLAKTHLGFTDIRAPF
DGITDHLAVRIGSLLDEDDLLTELSDIAHLWVYFNVPEAKYLDFIRREKGKTNEKVQLRMANGEIYEHTGVIETIVGDFY
NTSGNIQFRALFENPDRVLRHGQTGTILMTVPYPNAMLIPQKATFEIMDKIYLYVVNKEEKVEQRLIQIEAELPHMFIVK
SGVNDGERILIEGMRKVSPGDKVMIDLKPPQEVRSELMKLYTE
>Mature_363_residues
MKMVTKLSIVLGLIATLVLSGCQKHDTHEEMPHYAATTPFREDTSILEPYVCQIRAIRHIEVRSLEKGYLTHIFIDEGQW
VKKGQPMFKIMPNVYQAELLTAEAEAQNVNIEYLNTKALADKNIVSANELALAKAKLDKANAQVNLAKTHLGFTDIRAPF
DGITDHLAVRIGSLLDEDDLLTELSDIAHLWVYFNVPEAKYLDFIRREKGKTNEKVQLRMANGEIYEHTGVIETIVGDFY
NTSGNIQFRALFENPDRVLRHGQTGTILMTVPYPNAMLIPQKATFEIMDKIYLYVVNKEEKVEQRLIQIEAELPHMFIVK
SGVNDGERILIEGMRKVSPGDKVMIDLKPPQEVRSELMKLYTE

Specific function: Involved in resistance to several unrelated toxic compounds, such as dyes, detergents and antibiotics [H]

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI1789929, Length=308, Percent_Identity=25.6493506493506, Blast_Score=102, Evalue=4e-23,
Organism=Escherichia coli, GI1786668, Length=370, Percent_Identity=26.4864864864865, Blast_Score=99, Evalue=6e-22,
Organism=Escherichia coli, GI1789665, Length=382, Percent_Identity=25.9162303664921, Blast_Score=90, Evalue=3e-19,
Organism=Escherichia coli, GI87082036, Length=321, Percent_Identity=24.6105919003115, Blast_Score=79, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 41312; Mature: 41312

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMVTKLSIVLGLIATLVLSGCQKHDTHEEMPHYAATTPFREDTSILEPYVCQIRAIRHI
CCHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
EVRSLEKGYLTHIFIDEGQWVKKGQPMFKIMPNVYQAELLTAEAEAQNVNIEYLNTKALA
HHHHCCCCCEEEEEEECCCCCCCCCCHHHHCCCHHHHHHHEECCCCCCCEEEEEECHHHC
DKNIVSANELALAKAKLDKANAQVNLAKTHLGFTDIRAPFDGITDHLAVRIGSLLDEDDL
CCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCHHHHCCCCCHHHHHHHHHHHHHCCHHHH
LTELSDIAHLWVYFNVPEAKYLDFIRREKGKTNEKVQLRMANGEIYEHTGVIETIVGDFY
HHHHHHHEEEEEEEECCCHHHHHHHHHHCCCCCCEEEEEEECCEEEECCCHHHHHHHHHC
NTSGNIQFRALFENPDRVLRHGQTGTILMTVPYPNAMLIPQKATFEIMDKIYLYVVNKEE
CCCCCEEEEEEECCCHHHHHCCCCCEEEEEECCCCEEEECCCHHHHHHCEEEEEEECCHH
KVEQRLIQIEAELPHMFIVKSGVNDGERILIEGMRKVSPGDKVMIDLKPPQEVRSELMKL
HHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHH
YTE
HCC
>Mature Secondary Structure
MKMVTKLSIVLGLIATLVLSGCQKHDTHEEMPHYAATTPFREDTSILEPYVCQIRAIRHI
CCHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
EVRSLEKGYLTHIFIDEGQWVKKGQPMFKIMPNVYQAELLTAEAEAQNVNIEYLNTKALA
HHHHCCCCCEEEEEEECCCCCCCCCCHHHHCCCHHHHHHHEECCCCCCCEEEEEECHHHC
DKNIVSANELALAKAKLDKANAQVNLAKTHLGFTDIRAPFDGITDHLAVRIGSLLDEDDL
CCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCHHHHCCCCCHHHHHHHHHHHHHCCHHHH
LTELSDIAHLWVYFNVPEAKYLDFIRREKGKTNEKVQLRMANGEIYEHTGVIETIVGDFY
HHHHHHHEEEEEEEECCCHHHHHHHHHHCCCCCCEEEEEEECCEEEECCCHHHHHHHHHC
NTSGNIQFRALFENPDRVLRHGQTGTILMTVPYPNAMLIPQKATFEIMDKIYLYVVNKEE
CCCCCEEEEEEECCCHHHHHCCCCCEEEEEECCCCEEEECCCHHHHHHCEEEEEEECCHH
KVEQRLIQIEAELPHMFIVKSGVNDGERILIEGMRKVSPGDKVMIDLKPPQEVRSELMKL
HHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHH
YTE
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12271122 [H]